RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
CHD2-215ENST00000628375 DMAC1Q96GE9 116 aa3.57□□□□□ -1.84
CHD2-215ENST00000628375 Q5W150 140 aa3.55□□□□□ -1.84
CHD2-215ENST00000628375 MIR22HGQ0VDD5 57 aa3.55□□□□□ -1.84
CHD2-215ENST00000628375 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
CHD2-215ENST00000628375 LINC00304Q8N9R0 145 aa3.55□□□□□ -1.84
CHD2-215ENST00000628375 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
CHD2-215ENST00000628375 UQCR11O14957 56 aa3.54□□□□□ -1.84
CHD2-215ENST00000628375 CSAG1Q6PB30 78 aa3.53□□□□□ -1.84
CHD2-215ENST00000628375 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
CHD2-215ENST00000628375 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
CHD2-215ENST00000628375 KRTAP16-1A8MUX0 517 aa3.49□□□□□ -1.85
CHD2-215ENST00000628375 KRTAP3-3Q9BYR6 98 aa3.48□□□□□ -1.85
CHD2-215ENST00000628375 KRTAP3-2Q9BYR7 98 aa3.48□□□□□ -1.85
CHD2-215ENST00000628375 ROMO1P60602 79 aa3.48□□□□□ -1.85
CHD2-215ENST00000628375 IGKV2-30P06310 120 aa3.47□□□□□ -1.85
CHD2-215ENST00000628375 TNXBP22105 4242 aa3.47□□□□□ -1.85
CHD2-215ENST00000628375 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
CHD2-215ENST00000628375 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
CHD2-215ENST00000628375 A8MUU9 505 aa3.42□□□□□ -1.86
CHD2-215ENST00000628375 SSBP3-AS1Q7Z2R9 100 aa3.42□□□□□ -1.86
CHD2-215ENST00000628375 SPINK1P00995 79 aa3.41□□□□□ -1.86
CHD2-215ENST00000628375 IGKV2D-30A0A075B6S6 120 aa3.4□□□□□ -1.87
CHD2-215ENST00000628375 H0YAA0 97 aa3.38□□□□□ -1.87
CHD2-215ENST00000628375 P0C880 135 aa3.37□□□□□ -1.87
CHD2-215ENST00000628375 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
CHD2-215ENST00000628375 A0A1B0GU33 70 aa3.31□□□□□ -1.88
CHD2-215ENST00000628375 K7ERS5 55 aa3.31□□□□□ -1.88
CHD2-215ENST00000628375 COX6B2Q6YFQ2 88 aa3.31□□□□□ -1.88
CHD2-215ENST00000628375 RPS29P62273 56 aaKnown RBP3.31□□□□□ -1.88
CHD2-215ENST00000628375 XP32Q5T750 250 aa3.31□□□□□ -1.88
CHD2-215ENST00000628375 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
CHD2-215ENST00000628375 H1FX-AS1Q4G0G2 97 aa3.3□□□□□ -1.88
CHD2-215ENST00000628375 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
CHD2-215ENST00000628375 M0R2T5 61 aa3.29□□□□□ -1.88
CHD2-215ENST00000628375 LCE2DQ5TA82 110 aaPredicted RBP3.29□□□□□ -1.88
CHD2-215ENST00000628375 KRTAP4-1Q9BYQ7 146 aa3.28□□□□□ -1.88
CHD2-215ENST00000628375 CRIPTQ9P021 101 aa3.25□□□□□ -1.89
CHD2-215ENST00000628375 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
CHD2-215ENST00000628375 TPRXLQ17RH7 258 aa3.23□□□□□ -1.89
CHD2-215ENST00000628375 KRTAP3-1Q9BYR8 98 aa3.23□□□□□ -1.89
CHD2-215ENST00000628375 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
CHD2-215ENST00000628375 USH2AO75445 5202 aa3.21□□□□□ -1.9
CHD2-215ENST00000628375 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
CHD2-215ENST00000628375 RPL37P61927 97 aaKnown RBP3.17□□□□□ -1.9
CHD2-215ENST00000628375 CAMK2N1Q7Z7J9 78 aa3.17□□□□□ -1.9
CHD2-215ENST00000628375 MUC17Q685J3 4493 aa3.14□□□□□ -1.91
CHD2-215ENST00000628375 KRTAP10-6P60371 365 aaPredicted RBP3.13□□□□□ -1.91
CHD2-215ENST00000628375 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
CHD2-215ENST00000628375 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
CHD2-215ENST00000628375 A0A0D9SG42 100 aa3.08□□□□□ -1.92
CHD2-215ENST00000628375 S4R3F8 94 aa3.07□□□□□ -1.92
CHD2-215ENST00000628375 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
CHD2-215ENST00000628375 MT1HP80294 61 aa3.02□□□□□ -1.93
CHD2-215ENST00000628375 LCE2CQ5TA81 110 aa3.02□□□□□ -1.93
CHD2-215ENST00000628375 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
CHD2-215ENST00000628375 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
CHD2-215ENST00000628375 LCE2AQ5TA79 106 aaPredicted RBP3□□□□□ -1.93
CHD2-215ENST00000628375 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
CHD2-215ENST00000628375 FLGP20930 4061 aaPredicted RBP2.95□□□□□ -1.94
CHD2-215ENST00000628375 M0QZ58 72 aa2.93□□□□□ -1.94
CHD2-215ENST00000628375 LCE2BO14633 110 aa2.92□□□□□ -1.94
CHD2-215ENST00000628375 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
CHD2-215ENST00000628375 KRTAP9-2Q9BYQ4 174 aa2.92□□□□□ -1.94
CHD2-215ENST00000628375 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
CHD2-215ENST00000628375 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
CHD2-215ENST00000628375 LORP23490 312 aaPredicted RBP2.89□□□□□ -1.95
CHD2-215ENST00000628375 MT1FP04733 61 aa2.88□□□□□ -1.95
CHD2-215ENST00000628375 KMT2DO14686 5537 aa2.87□□□□□ -1.95
CHD2-215ENST00000628375 MT2AP02795 61 aa2.86□□□□□ -1.95
CHD2-215ENST00000628375 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
CHD2-215ENST00000628375 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
CHD2-215ENST00000628375 R4GN34 69 aa2.82□□□□□ -1.96
CHD2-215ENST00000628375 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
CHD2-215ENST00000628375 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
CHD2-215ENST00000628375 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.96
CHD2-215ENST00000628375 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
CHD2-215ENST00000628375 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
CHD2-215ENST00000628375 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
CHD2-215ENST00000628375 KRTAP9-3Q9BYQ3 159 aa2.74□□□□□ -1.97
CHD2-215ENST00000628375 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
CHD2-215ENST00000628375 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
CHD2-215ENST00000628375 INE1O15225 51 aa2.69□□□□□ -1.98
CHD2-215ENST00000628375 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
CHD2-215ENST00000628375 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
CHD2-215ENST00000628375 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
CHD2-215ENST00000628375 MT1BP07438 61 aa2.61□□□□□ -1.99
CHD2-215ENST00000628375 TNP1P09430 55 aa2.6□□□□□ -1.99
CHD2-215ENST00000628375 KRTAP4-8A0A0G2JLE6 195 aa2.57□□□□□ -2
CHD2-215ENST00000628375 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
CHD2-215ENST00000628375 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
CHD2-215ENST00000628375 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.53□□□□□ -2.01
CHD2-215ENST00000628375 KRTAP9-7A8MTY7 169 aa2.51□□□□□ -2.01
CHD2-215ENST00000628375 KRTAP19-8Q3LI54 63 aa2.51□□□□□ -2.01
CHD2-215ENST00000628375 KRTAP19-4Q3LI73 84 aa2.51□□□□□ -2.01
CHD2-215ENST00000628375 KRTAP10-7P60409 375 aaPredicted RBP2.5□□□□□ -2.01
CHD2-215ENST00000628375 MT1XP80297 61 aa2.49□□□□□ -2.01
CHD2-215ENST00000628375 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
CHD2-215ENST00000628375 KRTAP10-5P60370 271 aa2.48□□□□□ -2.01
CHD2-215ENST00000628375 SPRR2FQ96RM1 72 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms