RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
FDPS-220ENST00000611010 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
FDPS-220ENST00000611010 SPANXA2-OT1Q8N9U9 137 aa6.14□□□□□ -1.43
FDPS-220ENST00000611010 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
FDPS-220ENST00000611010 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
FDPS-220ENST00000611010 LOC101927531A0A1B0GV80 90 aa6.13□□□□□ -1.43
FDPS-220ENST00000611010 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
FDPS-220ENST00000611010 Q8N9P0 234 aaPredicted RBP6.12□□□□□ -1.43
FDPS-220ENST00000611010 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
FDPS-220ENST00000611010 CYP4F30PQ9H0H9 118 aa6.11□□□□□ -1.43
FDPS-220ENST00000611010 Q5W150 140 aa6.08□□□□□ -1.44
FDPS-220ENST00000611010 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
FDPS-220ENST00000611010 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
FDPS-220ENST00000611010 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
FDPS-220ENST00000611010 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
FDPS-220ENST00000611010 MT2AP02795 61 aa6.04□□□□□ -1.44
FDPS-220ENST00000611010 MT1FP04733 61 aa6.01□□□□□ -1.45
FDPS-220ENST00000611010 IGKV2-30P06310 120 aa6.01□□□□□ -1.45
FDPS-220ENST00000611010 Q75L30 129 aa6□□□□□ -1.45
FDPS-220ENST00000611010 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
FDPS-220ENST00000611010 KRTAP9-3Q9BYQ3 159 aa5.97□□□□□ -1.45
FDPS-220ENST00000611010 COA5Q86WW8 74 aa5.96□□□□□ -1.46
FDPS-220ENST00000611010 MPLKIPQ8TAP9 179 aa5.96□□□□□ -1.46
FDPS-220ENST00000611010 HRES1P13985 223 aa5.95□□□□□ -1.46
FDPS-220ENST00000611010 ACYP2P14621 99 aa5.95□□□□□ -1.46
FDPS-220ENST00000611010 V9GYY9 64 aa5.95□□□□□ -1.46
FDPS-220ENST00000611010 A8MUU9 505 aa5.94□□□□□ -1.46
FDPS-220ENST00000611010 C4orf26Q17RF5 130 aa5.94□□□□□ -1.46
FDPS-220ENST00000611010 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
FDPS-220ENST00000611010 C20orf166-AS1Q96NR2 134 aa5.94□□□□□ -1.46
FDPS-220ENST00000611010 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
FDPS-220ENST00000611010 Q1T7F1 81 aa5.91□□□□□ -1.46
FDPS-220ENST00000611010 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
FDPS-220ENST00000611010 DMAC1Q96GE9 116 aa5.88□□□□□ -1.47
FDPS-220ENST00000611010 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
FDPS-220ENST00000611010 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
FDPS-220ENST00000611010 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
FDPS-220ENST00000611010 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
FDPS-220ENST00000611010 A8MUN3 132 aa5.82□□□□□ -1.48
FDPS-220ENST00000611010 PSPHP1O15172 72 aa5.81□□□□□ -1.48
FDPS-220ENST00000611010 SPINK7P58062 85 aa5.81□□□□□ -1.48
FDPS-220ENST00000611010 PRR15LQ9BU68 103 aa5.78□□□□□ -1.48
FDPS-220ENST00000611010 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
FDPS-220ENST00000611010 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
FDPS-220ENST00000611010 SPTSSBQ8NFR3 76 aa5.76□□□□□ -1.49
FDPS-220ENST00000611010 BRK1Q8WUW1 75 aa5.72□□□□□ -1.49
FDPS-220ENST00000611010 NEBP20929 6669 aa5.71□□□□□ -1.5
FDPS-220ENST00000611010 Q5VV11 94 aa5.71□□□□□ -1.5
FDPS-220ENST00000611010 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
FDPS-220ENST00000611010 A0A1B0GU69 56 aa5.68□□□□□ -1.5
FDPS-220ENST00000611010 RBM12B-AS1Q9P1G2 102 aa5.68□□□□□ -1.5
FDPS-220ENST00000611010 PRO0628Q9UI54 55 aa5.68□□□□□ -1.5
FDPS-220ENST00000611010 A6NED7 52 aa5.66□□□□□ -1.5
FDPS-220ENST00000611010 SEC61GP60059 68 aa5.65□□□□□ -1.5
FDPS-220ENST00000611010 MUC12Q9UKN1 5478 aa5.65□□□□□ -1.51
FDPS-220ENST00000611010 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
FDPS-220ENST00000611010 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
FDPS-220ENST00000611010 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
FDPS-220ENST00000611010 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
FDPS-220ENST00000611010 UQCR11O14957 56 aa5.53□□□□□ -1.52
FDPS-220ENST00000611010 H1FX-AS1Q4G0G2 97 aa5.53□□□□□ -1.52
FDPS-220ENST00000611010 S4R3F8 94 aa5.52□□□□□ -1.53
FDPS-220ENST00000611010 LCA10Q71F78 164 aa5.51□□□□□ -1.53
FDPS-220ENST00000611010 KRTAP20-1Q3LI63 56 aa5.5□□□□□ -1.53
FDPS-220ENST00000611010 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
FDPS-220ENST00000611010 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
FDPS-220ENST00000611010 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.54
FDPS-220ENST00000611010 A0A1B0GU33 70 aa5.44□□□□□ -1.54
FDPS-220ENST00000611010 A8MU10 97 aa5.43□□□□□ -1.54
FDPS-220ENST00000611010 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
FDPS-220ENST00000611010 MDN1Q9NU22 5596 aa5.43□□□□□ -1.54
FDPS-220ENST00000611010 MT1BP07438 61 aa5.42□□□□□ -1.54
FDPS-220ENST00000611010 KRTAP5-9P26371 169 aa5.41□□□□□ -1.54
FDPS-220ENST00000611010 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
FDPS-220ENST00000611010 KMT2DO14686 5537 aa5.41□□□□□ -1.54
FDPS-220ENST00000611010 A6NN06 94 aa5.39□□□□□ -1.55
FDPS-220ENST00000611010 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
FDPS-220ENST00000611010 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
FDPS-220ENST00000611010 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
FDPS-220ENST00000611010 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
FDPS-220ENST00000611010 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
FDPS-220ENST00000611010 H0YAA0 97 aa5.29□□□□□ -1.56
FDPS-220ENST00000611010 K7ERS5 55 aa5.29□□□□□ -1.56
FDPS-220ENST00000611010 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
FDPS-220ENST00000611010 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
FDPS-220ENST00000611010 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
FDPS-220ENST00000611010 P0C880 135 aa5.23□□□□□ -1.57
FDPS-220ENST00000611010 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
FDPS-220ENST00000611010 M0QZ58 72 aa5.2□□□□□ -1.58
FDPS-220ENST00000611010 A0A0D9SG42 100 aa5.18□□□□□ -1.58
FDPS-220ENST00000611010 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
FDPS-220ENST00000611010 SPRR2EP22531 72 aa5.12□□□□□ -1.59
FDPS-220ENST00000611010 SPRR2BP35325 72 aa5.12□□□□□ -1.59
FDPS-220ENST00000611010 SPRR2AP35326 72 aa5.12□□□□□ -1.59
FDPS-220ENST00000611010 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
FDPS-220ENST00000611010 R4GN34 69 aa5.11□□□□□ -1.59
FDPS-220ENST00000611010 H3BS24 57 aa5.09□□□□□ -1.59
FDPS-220ENST00000611010 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
FDPS-220ENST00000611010 SPINT4Q6UDR6 99 aa5.07□□□□□ -1.6
FDPS-220ENST00000611010 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms