RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 KRTAP2-4Q9BYR9 128 aa6.06□□□□□ -1.44
CLPTM1-208ENST00000588274 V9GYY9 64 aa6.06□□□□□ -1.44
CLPTM1-208ENST00000588274 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
CLPTM1-208ENST00000588274 LCA10Q71F78 164 aa6.02□□□□□ -1.45
CLPTM1-208ENST00000588274 KLKP1Q107X0 134 aa6.01□□□□□ -1.45
CLPTM1-208ENST00000588274 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
CLPTM1-208ENST00000588274 S4R3F8 94 aa6.01□□□□□ -1.45
CLPTM1-208ENST00000588274 IMUPQ9GZP8 106 aa6□□□□□ -1.45
CLPTM1-208ENST00000588274 UQCRQO14949 82 aa5.99□□□□□ -1.45
CLPTM1-208ENST00000588274 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
CLPTM1-208ENST00000588274 HCG22E2RYF7 251 aa5.97□□□□□ -1.45
CLPTM1-208ENST00000588274 Q8N9L7 120 aa5.97□□□□□ -1.45
CLPTM1-208ENST00000588274 KRTAP3-3Q9BYR6 98 aa5.97□□□□□ -1.45
CLPTM1-208ENST00000588274 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
CLPTM1-208ENST00000588274 TMEM258P61165 79 aa5.94□□□□□ -1.46
CLPTM1-208ENST00000588274 BPY2O14599 106 aa5.93□□□□□ -1.46
CLPTM1-208ENST00000588274 SPRR2EP22531 72 aa5.93□□□□□ -1.46
CLPTM1-208ENST00000588274 SPRR2BP35325 72 aa5.93□□□□□ -1.46
CLPTM1-208ENST00000588274 SPRR2AP35326 72 aa5.93□□□□□ -1.46
CLPTM1-208ENST00000588274 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
CLPTM1-208ENST00000588274 FAM240AA0A1B0GVK7 77 aa5.92□□□□□ -1.46
CLPTM1-208ENST00000588274 ACYP1P07311 99 aa5.92□□□□□ -1.46
CLPTM1-208ENST00000588274 CXCL6P80162 114 aa5.92□□□□□ -1.46
CLPTM1-208ENST00000588274 C1orf64Q8NEQ6 169 aa5.91□□□□□ -1.46
CLPTM1-208ENST00000588274 COX7CP15954 63 aa5.88□□□□□ -1.47
CLPTM1-208ENST00000588274 ATOX1O00244 68 aa5.87□□□□□ -1.47
CLPTM1-208ENST00000588274 LCE1AQ5T7P2 110 aa5.87□□□□□ -1.47
CLPTM1-208ENST00000588274 CRIPTQ9P021 101 aa5.86□□□□□ -1.47
CLPTM1-208ENST00000588274 A0A087WVE0 104 aa5.85□□□□□ -1.47
CLPTM1-208ENST00000588274 MT1XP80297 61 aa5.85□□□□□ -1.47
CLPTM1-208ENST00000588274 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
CLPTM1-208ENST00000588274 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
CLPTM1-208ENST00000588274 LINC00643Q86TS7 51 aa5.82□□□□□ -1.48
CLPTM1-208ENST00000588274 UBL5Q9BZL1 73 aa5.79□□□□□ -1.48
CLPTM1-208ENST00000588274 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
CLPTM1-208ENST00000588274 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
CLPTM1-208ENST00000588274 SERP1Q9Y6X1 66 aa5.76□□□□□ -1.49
CLPTM1-208ENST00000588274 SMIM26A0A096LP01 95 aa5.75□□□□□ -1.49
CLPTM1-208ENST00000588274 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
CLPTM1-208ENST00000588274 H0YAA0 97 aa5.73□□□□□ -1.49
CLPTM1-208ENST00000588274 SPRR2DP22532 72 aa5.73□□□□□ -1.49
CLPTM1-208ENST00000588274 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
CLPTM1-208ENST00000588274 ATP5EP2Q5VTU8 51 aa5.72□□□□□ -1.49
CLPTM1-208ENST00000588274 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
CLPTM1-208ENST00000588274 ATP5EP56381 51 aaPredicted RBP5.71□□□□□ -1.5
CLPTM1-208ENST00000588274 HIST1H4AP62805 103 aaKnown RBP5.71□□□□□ -1.5
CLPTM1-208ENST00000588274 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
CLPTM1-208ENST00000588274 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
CLPTM1-208ENST00000588274 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
CLPTM1-208ENST00000588274 CYP4F30PQ9H0H9 118 aa5.7□□□□□ -1.5
CLPTM1-208ENST00000588274 TP53AIP1Q9HCN2 124 aa5.68□□□□□ -1.5
CLPTM1-208ENST00000588274 A8MUN3 132 aa5.64□□□□□ -1.51
CLPTM1-208ENST00000588274 NDUFC1O43677 76 aa5.64□□□□□ -1.51
CLPTM1-208ENST00000588274 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
CLPTM1-208ENST00000588274 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
CLPTM1-208ENST00000588274 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
CLPTM1-208ENST00000588274 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
CLPTM1-208ENST00000588274 TRAV22A0A0B4J277 110 aa5.57□□□□□ -1.52
CLPTM1-208ENST00000588274 LOC101927531A0A1B0GV80 90 aa5.56□□□□□ -1.52
CLPTM1-208ENST00000588274 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
CLPTM1-208ENST00000588274 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
CLPTM1-208ENST00000588274 TRAV7A0A075B6U4 112 aa5.54□□□□□ -1.52
CLPTM1-208ENST00000588274 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
CLPTM1-208ENST00000588274 P0C880 135 aa5.5□□□□□ -1.53
CLPTM1-208ENST00000588274 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
CLPTM1-208ENST00000588274 CYSTM1Q9H1C7 97 aa5.49□□□□□ -1.53
CLPTM1-208ENST00000588274 H3BS24 57 aa5.48□□□□□ -1.53
CLPTM1-208ENST00000588274 H7BZZ5 65 aa5.48□□□□□ -1.53
CLPTM1-208ENST00000588274 R4GN34 69 aa5.46□□□□□ -1.54
CLPTM1-208ENST00000588274 OCR1Q9BZK8 76 aa5.44□□□□□ -1.54
CLPTM1-208ENST00000588274 KRTAP3-2Q9BYR7 98 aa5.43□□□□□ -1.54
CLPTM1-208ENST00000588274 M0QZ58 72 aa5.42□□□□□ -1.54
CLPTM1-208ENST00000588274 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
CLPTM1-208ENST00000588274 H0Y9P7 68 aa5.4□□□□□ -1.54
CLPTM1-208ENST00000588274 Q1T7F1 81 aa5.39□□□□□ -1.55
CLPTM1-208ENST00000588274 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
CLPTM1-208ENST00000588274 MP68P56378 58 aa5.33□□□□□ -1.56
CLPTM1-208ENST00000588274 LINC01554Q52M75 96 aa5.33□□□□□ -1.56
CLPTM1-208ENST00000588274 SNURFQ9Y675 71 aa5.32□□□□□ -1.56
CLPTM1-208ENST00000588274 LINC00208Q96KT6 92 aa5.31□□□□□ -1.56
CLPTM1-208ENST00000588274 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
CLPTM1-208ENST00000588274 H3BPC8 53 aa5.29□□□□□ -1.56
CLPTM1-208ENST00000588274 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
CLPTM1-208ENST00000588274 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
CLPTM1-208ENST00000588274 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
CLPTM1-208ENST00000588274 MT1EP04732 61 aa5.2□□□□□ -1.58
CLPTM1-208ENST00000588274 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
CLPTM1-208ENST00000588274 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
CLPTM1-208ENST00000588274 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
CLPTM1-208ENST00000588274 CHKB-CPT1BH3BT56 60 aa5.16□□□□□ -1.58
CLPTM1-208ENST00000588274 PSPHP1O15172 72 aa5.16□□□□□ -1.58
CLPTM1-208ENST00000588274 SPTSSBQ8NFR3 76 aa5.15□□□□□ -1.59
CLPTM1-208ENST00000588274 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
CLPTM1-208ENST00000588274 SPANXA2-OT1Q8N9U9 137 aa5.12□□□□□ -1.59
CLPTM1-208ENST00000588274 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
CLPTM1-208ENST00000588274 A6NED7 52 aa5.11□□□□□ -1.59
CLPTM1-208ENST00000588274 PRR15LQ9BU68 103 aa5.07□□□□□ -1.6
CLPTM1-208ENST00000588274 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
CLPTM1-208ENST00000588274 MT4P47944 62 aa5.04□□□□□ -1.6
CLPTM1-208ENST00000588274 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms