RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 LINC00313P59037 77 aa5.31□□□□□ -1.56
GGA3-209ENST00000580646 C20orf166-AS1Q96NR2 134 aa5.31□□□□□ -1.56
GGA3-209ENST00000580646 A8MU10 97 aa5.29□□□□□ -1.56
GGA3-209ENST00000580646 A8MUU9 505 aa5.29□□□□□ -1.56
GGA3-209ENST00000580646 DSCR10P59022 87 aa5.29□□□□□ -1.56
GGA3-209ENST00000580646 PCOTHQ58A44 107 aa5.29□□□□□ -1.56
GGA3-209ENST00000580646 IGHV6-1A0A0B4J1U7 121 aa5.28□□□□□ -1.56
GGA3-209ENST00000580646 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
GGA3-209ENST00000580646 COA5Q86WW8 74 aa5.27□□□□□ -1.57
GGA3-209ENST00000580646 NOTCH2NLQ7Z3S9 236 aa5.26□□□□□ -1.57
GGA3-209ENST00000580646 H0Y9P7 68 aa5.25□□□□□ -1.57
GGA3-209ENST00000580646 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
GGA3-209ENST00000580646 C8orf17Q9NRJ1 99 aa5.24□□□□□ -1.57
GGA3-209ENST00000580646 K7EQZ3 153 aa5.22□□□□□ -1.57
GGA3-209ENST00000580646 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
GGA3-209ENST00000580646 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
GGA3-209ENST00000580646 MMP24-AS1A0A0U1RRL7 71 aa5.2□□□□□ -1.58
GGA3-209ENST00000580646 MRPL34Q9BQ48 92 aaKnown RBP5.18□□□□□ -1.58
GGA3-209ENST00000580646 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
GGA3-209ENST00000580646 SPINK7P58062 85 aa5.15□□□□□ -1.59
GGA3-209ENST00000580646 MT1HP80294 61 aa5.15□□□□□ -1.59
GGA3-209ENST00000580646 TP53AIP1Q9HCN2 124 aa5.15□□□□□ -1.59
GGA3-209ENST00000580646 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
GGA3-209ENST00000580646 WFDC13Q8IUB5 93 aa5.11□□□□□ -1.59
GGA3-209ENST00000580646 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
GGA3-209ENST00000580646 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
GGA3-209ENST00000580646 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
GGA3-209ENST00000580646 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
GGA3-209ENST00000580646 M0R2T5 61 aa5.06□□□□□ -1.6
GGA3-209ENST00000580646 KRTAP10-6P60371 365 aaPredicted RBP5.06□□□□□ -1.6
GGA3-209ENST00000580646 LORP23490 312 aaPredicted RBP5.05□□□□□ -1.6
GGA3-209ENST00000580646 HRES1P13985 223 aa5.04□□□□□ -1.6
GGA3-209ENST00000580646 UQCR11O14957 56 aa5.03□□□□□ -1.6
GGA3-209ENST00000580646 CSAG1Q6PB30 78 aa5.03□□□□□ -1.6
GGA3-209ENST00000580646 USH2AO75445 5202 aa5.02□□□□□ -1.61
GGA3-209ENST00000580646 Q5W150 140 aa5.02□□□□□ -1.61
GGA3-209ENST00000580646 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
GGA3-209ENST00000580646 A0A1B0GU69 56 aa5.01□□□□□ -1.61
GGA3-209ENST00000580646 ACYP2P14621 99 aa5.01□□□□□ -1.61
GGA3-209ENST00000580646 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
GGA3-209ENST00000580646 ROMO1P60602 79 aa4.99□□□□□ -1.61
GGA3-209ENST00000580646 IGKV2D-30A0A075B6S6 120 aa4.95□□□□□ -1.62
GGA3-209ENST00000580646 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
GGA3-209ENST00000580646 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
GGA3-209ENST00000580646 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
GGA3-209ENST00000580646 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
GGA3-209ENST00000580646 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
GGA3-209ENST00000580646 DMAC1Q96GE9 116 aa4.89□□□□□ -1.63
GGA3-209ENST00000580646 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
GGA3-209ENST00000580646 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
GGA3-209ENST00000580646 H1FX-AS1Q4G0G2 97 aa4.86□□□□□ -1.63
GGA3-209ENST00000580646 MT2AP02795 61 aa4.8□□□□□ -1.64
GGA3-209ENST00000580646 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
GGA3-209ENST00000580646 K7ERS5 55 aa4.77□□□□□ -1.65
GGA3-209ENST00000580646 MT1FP04733 61 aa4.76□□□□□ -1.65
GGA3-209ENST00000580646 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
GGA3-209ENST00000580646 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
GGA3-209ENST00000580646 S4R3F8 94 aa4.73□□□□□ -1.65
GGA3-209ENST00000580646 P0C880 135 aa4.72□□□□□ -1.65
GGA3-209ENST00000580646 LCE2BO14633 110 aa4.71□□□□□ -1.66
GGA3-209ENST00000580646 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
GGA3-209ENST00000580646 NEBP20929 6669 aa4.68□□□□□ -1.66
GGA3-209ENST00000580646 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
GGA3-209ENST00000580646 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
GGA3-209ENST00000580646 MUC12Q9UKN1 5478 aa4.61□□□□□ -1.67
GGA3-209ENST00000580646 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
GGA3-209ENST00000580646 H0YAA0 97 aa4.59□□□□□ -1.67
GGA3-209ENST00000580646 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
GGA3-209ENST00000580646 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
GGA3-209ENST00000580646 A0A1B0GU33 70 aa4.57□□□□□ -1.68
GGA3-209ENST00000580646 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
GGA3-209ENST00000580646 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
GGA3-209ENST00000580646 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
GGA3-209ENST00000580646 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
GGA3-209ENST00000580646 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
GGA3-209ENST00000580646 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
GGA3-209ENST00000580646 KRTAP3-2Q9BYR7 98 aa4.4□□□□□ -1.71
GGA3-209ENST00000580646 KMT2DO14686 5537 aa4.38□□□□□ -1.71
GGA3-209ENST00000580646 MT1BP07438 61 aa4.38□□□□□ -1.71
GGA3-209ENST00000580646 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
GGA3-209ENST00000580646 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
GGA3-209ENST00000580646 R4GN34 69 aa4.35□□□□□ -1.71
GGA3-209ENST00000580646 M0QZ58 72 aa4.31□□□□□ -1.72
GGA3-209ENST00000580646 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
GGA3-209ENST00000580646 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
GGA3-209ENST00000580646 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
GGA3-209ENST00000580646 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
GGA3-209ENST00000580646 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
GGA3-209ENST00000580646 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
GGA3-209ENST00000580646 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
GGA3-209ENST00000580646 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
GGA3-209ENST00000580646 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
GGA3-209ENST00000580646 MT1XP80297 61 aa4.14□□□□□ -1.75
GGA3-209ENST00000580646 A0A0D9SG42 100 aa4.13□□□□□ -1.75
GGA3-209ENST00000580646 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
GGA3-209ENST00000580646 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
GGA3-209ENST00000580646 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
GGA3-209ENST00000580646 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
GGA3-209ENST00000580646 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
GGA3-209ENST00000580646 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms