RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 MRPL33O75394 65 aaKnown RBP0.3□□□□□ -2.36
LINC00557-201ENST00000563184 ADIRFQ15847 76 aa0.3□□□□□ -2.36
LINC00557-201ENST00000563184 DEFB112Q30KQ8 113 aa0.3□□□□□ -2.36
LINC00557-201ENST00000563184 TDRG1Q3Y452 100 aa0.3□□□□□ -2.36
LINC00557-201ENST00000563184 LELP1Q5T871 98 aa0.3□□□□□ -2.36
LINC00557-201ENST00000563184 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
LINC00557-201ENST00000563184 MYH4Q9Y623 1939 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 FXYD6-FXYD2A0A087WZ82 144 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 IQCF6A8MYZ5 107 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 K7EQZ3 153 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 NDUFB1O75438 58 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 IGLC2P0DOY2 106 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 DEFB110Q30KQ9 67 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 MINOS1Q5TGZ0 78 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 ST20Q9HBF5 79 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 APLNQ9ULZ1 77 aa0.29□□□□□ -2.36
LINC00557-201ENST00000563184 FLGP20930 4061 aaPredicted RBP0.28□□□□□ -2.36
LINC00557-201ENST00000563184 MUC12Q9UKN1 5478 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 CEBPZOSA8MTT3 80 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 LYNX1G3V0Z9 82 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 H3BNG1 76 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 H3BUA1 57 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 I3L3M4 83 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 MT1HL1P0DM35 61 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 SPRR1AP35321 89 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 RPL38P63173 70 aaKnown RBP0.28□□□□□ -2.36
LINC00557-201ENST00000563184 KRTAP20-1Q3LI63 56 aa0.28□□□□□ -2.36
LINC00557-201ENST00000563184 LPAP08519 4548 aa0.27□□□□□ -2.37
LINC00557-201ENST00000563184 CPSF4LA6NMK7 179 aaKnown RBP0.27□□□□□ -2.37
LINC00557-201ENST00000563184 H3BUX3 64 aa0.27□□□□□ -2.37
LINC00557-201ENST00000563184 CCL22O00626 93 aa0.27□□□□□ -2.37
LINC00557-201ENST00000563184 KLK9Q2XQG4 91 aa0.27□□□□□ -2.37
LINC00557-201ENST00000563184 NCBP2-AS2Q69YL0 99 aa0.27□□□□□ -2.37
LINC00557-201ENST00000563184 HEPN1Q6WQI6 88 aa0.27□□□□□ -2.37
LINC00557-201ENST00000563184 DEFB131BA0A096LNP1 70 aa0.26□□□□□ -2.37
LINC00557-201ENST00000563184 H3BSH0 61 aa0.26□□□□□ -2.37
LINC00557-201ENST00000563184 SMR3BP02814 79 aaPredicted RBP0.26□□□□□ -2.37
LINC00557-201ENST00000563184 SPART-AS1P0CW21 52 aa0.26□□□□□ -2.37
LINC00557-201ENST00000563184 SPRR1BP22528 89 aa0.26□□□□□ -2.37
LINC00557-201ENST00000563184 DEFB114Q30KQ6 69 aa0.26□□□□□ -2.37
LINC00557-201ENST00000563184 KRTAP19-6Q3LI70 58 aa0.26□□□□□ -2.37
LINC00557-201ENST00000563184 COX6B2Q6YFQ2 88 aa0.26□□□□□ -2.37
LINC00557-201ENST00000563184 SYNE2Q8WXH0 6885 aaKnown RBP0.25□□□□□ -2.37
LINC00557-201ENST00000563184 NDUFA4O00483 81 aa0.25□□□□□ -2.37
LINC00557-201ENST00000563184 NDUFA3O95167 84 aa0.25□□□□□ -2.37
LINC00557-201ENST00000563184 DEFB135Q30KP9 77 aa0.25□□□□□ -2.37
LINC00557-201ENST00000563184 GAFA1Q96PS6 74 aa0.25□□□□□ -2.37
LINC00557-201ENST00000563184 DSTQ03001 7570 aaKnown RBP0.25□□□□□ -2.37
LINC00557-201ENST00000563184 NEBP20929 6669 aa0.25□□□□□ -2.37
LINC00557-201ENST00000563184 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
LINC00557-201ENST00000563184 COX7BP24311 80 aa0.24□□□□□ -2.37
LINC00557-201ENST00000563184 DEFB136Q30KP8 78 aa0.24□□□□□ -2.37
LINC00557-201ENST00000563184 ATP5EP2Q5VTU8 51 aa0.24□□□□□ -2.37
LINC00557-201ENST00000563184 CDKN2A-AS1Q9UH64 79 aa0.24□□□□□ -2.37
LINC00557-201ENST00000563184 HILPDAQ9Y5L2 63 aa0.24□□□□□ -2.37
LINC00557-201ENST00000563184 A0A087WWC5 75 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 TRAV21A0A0B4J279 112 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 A8MTW9 85 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 IFI27P40305 119 aaPredicted RBP0.23□□□□□ -2.37
LINC00557-201ENST00000563184 RPS29P62273 56 aaKnown RBP0.23□□□□□ -2.37
LINC00557-201ENST00000563184 MT1HP80294 61 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 KRTAP19-2Q3LHN2 52 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 LINC01556Q5JQF7 62 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 DEFB105AQ8NG35 78 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 MRPL34Q9BQ48 92 aaKnown RBP0.23□□□□□ -2.37
LINC00557-201ENST00000563184 RHPN1-AS1Q9BWJ2 59 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 TIMM8BQ9Y5J9 83 aaPredicted RBP0.23□□□□□ -2.37
LINC00557-201ENST00000563184 ANKRD36A6QL64 1941 aa0.23□□□□□ -2.37
LINC00557-201ENST00000563184 A0A096LPF7 62 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 UMAD1C9J7I0 102 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 M0R2T5 61 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 DEFB4AO15263 64 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 DEFB131AP59861 70 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 SNRPGP62308 76 aaKnown RBP0.22□□□□□ -2.37
LINC00557-201ENST00000563184 BVES-AS1Q5T3Y7 98 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 TMEM167AQ8TBQ9 72 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 C18orf32Q8TCD1 76 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 LEAP2Q969E1 77 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 ABRACLQ9P1F3 81 aa0.22□□□□□ -2.37
LINC00557-201ENST00000563184 A0A087WXM4 84 aa0.21□□□□□ -2.38
LINC00557-201ENST00000563184 H3BUT2 72 aa0.21□□□□□ -2.38
LINC00557-201ENST00000563184 SFTA3P0C7M3 94 aa0.21□□□□□ -2.38
LINC00557-201ENST00000563184 SMIM13P0DJ93 91 aa0.21□□□□□ -2.38
LINC00557-201ENST00000563184 DEFB130BP0DP73 79 aa0.21□□□□□ -2.38
LINC00557-201ENST00000563184 DEFB130AP0DP74 79 aa0.21□□□□□ -2.38
LINC00557-201ENST00000563184 HTN3P15516 51 aa0.21□□□□□ -2.38
LINC00557-201ENST00000563184 PRCDQ00LT1 54 aa0.21□□□□□ -2.38
LINC00557-201ENST00000563184 NOP10Q9NPE3 64 aaKnown RBP0.21□□□□□ -2.38
LINC00557-201ENST00000563184 K7EIM0 57 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 MT2AP02795 61 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 MT1FP04733 61 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 C3orf79P0CE67 100 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 SPRR2EP22531 72 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 SPRR2DP22532 72 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 SPRR2BP35325 72 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 SPRR2AP35326 72 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 LINC01590Q5TEZ4 76 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 WFDC10BQ8IUB3 73 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 FXYD6Q9H0Q3 95 aa0.2□□□□□ -2.38
LINC00557-201ENST00000563184 CMC2Q9NRP2 79 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms