RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 RPL39LQ96EH5 51 aaKnown RBP1.09□□□□□ -2.23
SMG1-204ENST00000561940 Q96NJ1 140 aa1.09□□□□□ -2.23
SMG1-204ENST00000561940 CNFNQ9BYD5 112 aa1.09□□□□□ -2.23
SMG1-204ENST00000561940 PRO1933Q9H354 126 aa1.09□□□□□ -2.23
SMG1-204ENST00000561940 TOMM7Q9P0U1 55 aa1.09□□□□□ -2.23
SMG1-204ENST00000561940 SIX6O95475 246 aa1.08□□□□□ -2.24
SMG1-204ENST00000561940 SPRR1BP22528 89 aa1.08□□□□□ -2.24
SMG1-204ENST00000561940 SPINK7P58062 85 aa1.08□□□□□ -2.24
SMG1-204ENST00000561940 GNGT1P63211 74 aa1.08□□□□□ -2.24
SMG1-204ENST00000561940 NDUFB6O95139 128 aa1.07□□□□□ -2.24
SMG1-204ENST00000561940 SEC11AP67812 179 aa1.07□□□□□ -2.24
SMG1-204ENST00000561940 COX17Q14061 63 aa1.07□□□□□ -2.24
SMG1-204ENST00000561940 RPL7L1Q6DKI1 246 aaKnown RBP1.07□□□□□ -2.24
SMG1-204ENST00000561940 BAGE2Q86Y30 109 aa1.07□□□□□ -2.24
SMG1-204ENST00000561940 TMEM191AQ9H0A3 160 aa1.07□□□□□ -2.24
SMG1-204ENST00000561940 SERF2P84101 59 aa1.06□□□□□ -2.24
SMG1-204ENST00000561940 KCNRGQ8N5I3 272 aa1.06□□□□□ -2.24
SMG1-204ENST00000561940 IFI27P40305 119 aaPredicted RBP1.05□□□□□ -2.24
SMG1-204ENST00000561940 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
SMG1-204ENST00000561940 Q5BKY6 102 aa1.05□□□□□ -2.24
SMG1-204ENST00000561940 Q6ZRX8 168 aa1.05□□□□□ -2.24
SMG1-204ENST00000561940 C2orf88Q9BSF0 95 aa1.05□□□□□ -2.24
SMG1-204ENST00000561940 ELOF1P60002 83 aaKnown RBP1.04□□□□□ -2.24
SMG1-204ENST00000561940 RPL39P62891 51 aaKnown RBP1.04□□□□□ -2.24
SMG1-204ENST00000561940 MT1XP80297 61 aa1.04□□□□□ -2.24
SMG1-204ENST00000561940 H1FX-AS1Q4G0G2 97 aa1.04□□□□□ -2.24
SMG1-204ENST00000561940 TOMM5Q8N4H5 51 aa1.04□□□□□ -2.24
SMG1-204ENST00000561940 COX7B2Q8TF08 81 aa1.04□□□□□ -2.24
SMG1-204ENST00000561940 AMELXQ99217 191 aa1.04□□□□□ -2.24
SMG1-204ENST00000561940 C20orf78Q9BR46 151 aa1.04□□□□□ -2.24
SMG1-204ENST00000561940 CRIPTQ9P021 101 aa1.04□□□□□ -2.24
SMG1-204ENST00000561940 CDKN2A-AS1Q9UH64 79 aa1.03□□□□□ -2.24
SMG1-204ENST00000561940 TRBV10-3A0A0K0K1G6 114 aa1.02□□□□□ -2.25
SMG1-204ENST00000561940 NAP1L6A6NFF2 107 aa1.02□□□□□ -2.25
SMG1-204ENST00000561940 ZNF815PA8K554 130 aa1.02□□□□□ -2.25
SMG1-204ENST00000561940 SFTA2Q6UW10 78 aa1.02□□□□□ -2.25
SMG1-204ENST00000561940 CTXND1A0A1B0GTU2 59 aa1.01□□□□□ -2.25
SMG1-204ENST00000561940 SNCGO76070 127 aa1□□□□□ -2.25
SMG1-204ENST00000561940 MT1GP13640 62 aa1□□□□□ -2.25
SMG1-204ENST00000561940 NPC2P61916 151 aa1□□□□□ -2.25
SMG1-204ENST00000561940 C20orf197Q8N268 126 aa1□□□□□ -2.25
SMG1-204ENST00000561940 COPS9Q8WXC6 57 aa1□□□□□ -2.25
SMG1-204ENST00000561940 A0A1B0GUT8 65 aa0.99□□□□□ -2.25
SMG1-204ENST00000561940 TRBV7-7A0A0K0K1E9 115 aa0.98□□□□□ -2.25
SMG1-204ENST00000561940 IGIPA6NJ69 53 aa0.98□□□□□ -2.25
SMG1-204ENST00000561940 D6R8Y8 96 aa0.98□□□□□ -2.25
SMG1-204ENST00000561940 LINC00158P58513 81 aa0.98□□□□□ -2.25
SMG1-204ENST00000561940 WFDC13Q8IUB5 93 aa0.98□□□□□ -2.25
SMG1-204ENST00000561940 SMIM2Q9BVW6 85 aa0.98□□□□□ -2.25
SMG1-204ENST00000561940 LINC00587B1AMM8 73 aa0.97□□□□□ -2.25
SMG1-204ENST00000561940 C3orf79P0CE67 100 aa0.97□□□□□ -2.25
SMG1-204ENST00000561940 GNG4P50150 75 aa0.97□□□□□ -2.25
SMG1-204ENST00000561940 Q6JHZ5 121 aa0.97□□□□□ -2.25
SMG1-204ENST00000561940 Q9H521 79 aa0.97□□□□□ -2.25
SMG1-204ENST00000561940 V9GYV3 84 aa0.97□□□□□ -2.25
SMG1-204ENST00000561940 A0A087WXM4 84 aa0.96□□□□□ -2.26
SMG1-204ENST00000561940 K7EMI3 77 aa0.96□□□□□ -2.26
SMG1-204ENST00000561940 MPC2O95563 127 aa0.96□□□□□ -2.26
SMG1-204ENST00000561940 SPINK8P0C7L1 97 aa0.96□□□□□ -2.26
SMG1-204ENST00000561940 S100A7L2Q5SY68 101 aa0.96□□□□□ -2.26
SMG1-204ENST00000561940 DEFB105AQ8NG35 78 aa0.96□□□□□ -2.26
SMG1-204ENST00000561940 PRR15LQ9BU68 103 aa0.96□□□□□ -2.26
SMG1-204ENST00000561940 IGLV5-48A0A075B6I7 105 aa0.95□□□□□ -2.26
SMG1-204ENST00000561940 H0YAA0 97 aa0.95□□□□□ -2.26
SMG1-204ENST00000561940 LINC01549A6NIU2 74 aa0.94□□□□□ -2.26
SMG1-204ENST00000561940 MT1EP04732 61 aa0.94□□□□□ -2.26
SMG1-204ENST00000561940 F8WEM9 126 aa0.93□□□□□ -2.26
SMG1-204ENST00000561940 KRTAP19-7Q3SYF9 63 aa0.93□□□□□ -2.26
SMG1-204ENST00000561940 NXT2Q9NPJ8 142 aaKnown RBP0.93□□□□□ -2.26
SMG1-204ENST00000561940 MANBALQ9NQG1 85 aa0.93□□□□□ -2.26
SMG1-204ENST00000561940 V9GYH0 126 aa0.93□□□□□ -2.26
SMG1-204ENST00000561940 TRAV13-2A0A0B4J235 113 aa0.92□□□□□ -2.26
SMG1-204ENST00000561940 UMAD1C9J7I0 102 aa0.92□□□□□ -2.26
SMG1-204ENST00000561940 SMIM13P0DJ93 91 aa0.92□□□□□ -2.26
SMG1-204ENST00000561940 MT1MQ8N339 61 aa0.92□□□□□ -2.26
SMG1-204ENST00000561940 SMIM11BQ8TCY0 68 aa0.92□□□□□ -2.26
SMG1-204ENST00000561940 S100A8P05109 93 aa0.91□□□□□ -2.26
SMG1-204ENST00000561940 COX7BP24311 80 aa0.91□□□□□ -2.26
SMG1-204ENST00000561940 MEIG1Q5JSS6 88 aa0.91□□□□□ -2.26
SMG1-204ENST00000561940 MRPL54Q6P161 138 aaKnown RBP0.91□□□□□ -2.26
SMG1-204ENST00000561940 Q8N8P6 123 aa0.91□□□□□ -2.26
SMG1-204ENST00000561940 IGLC3P0DOY3 106 aa0.9□□□□□ -2.27
SMG1-204ENST00000561940 SPTSSBQ8NFR3 76 aa0.9□□□□□ -2.27
SMG1-204ENST00000561940 SEC11CQ9BY50 192 aa0.89□□□□□ -2.27
SMG1-204ENST00000561940 GNG13Q9P2W3 67 aa0.89□□□□□ -2.27
SMG1-204ENST00000561940 K7EQZ3 153 aa0.88□□□□□ -2.27
SMG1-204ENST00000561940 FAM213BQ8TBF2 198 aa0.88□□□□□ -2.27
SMG1-204ENST00000561940 MYMXA0A1B0GTQ4 84 aa0.87□□□□□ -2.27
SMG1-204ENST00000561940 ACYP2P14621 99 aa0.87□□□□□ -2.27
SMG1-204ENST00000561940 SPANXDQ9BXN6 97 aa0.87□□□□□ -2.27
SMG1-204ENST00000561940 S4R3F8 94 aa0.87□□□□□ -2.27
SMG1-204ENST00000561940 SMIM27A0A1W2PRY6 76 aa0.86□□□□□ -2.27
SMG1-204ENST00000561940 SMIM6P0DI80 62 aa0.86□□□□□ -2.27
SMG1-204ENST00000561940 TMEM170BQ5T4T1 132 aa0.86□□□□□ -2.27
SMG1-204ENST00000561940 MT1LQ93083 61 aa0.85□□□□□ -2.27
SMG1-204ENST00000561940 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.27
SMG1-204ENST00000561940 LINC01546A6NGU7 62 aa0.84□□□□□ -2.27
SMG1-204ENST00000561940 BAGE3Q86Y29 109 aa0.84□□□□□ -2.27
SMG1-204ENST00000561940 SNHG12Q9BXW3 62 aa0.84□□□□□ -2.27
SMG1-204ENST00000561940 SERP1Q9Y6X1 66 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 213.5 ms