RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 TMEM254Q8TBM7 123 aa2.82□□□□□ -1.96
SMAD3-209ENST00000558894 A0A087WSZ3 146 aa2.81□□□□□ -1.96
SMAD3-209ENST00000558894 A6NN06 94 aa2.81□□□□□ -1.96
SMAD3-209ENST00000558894 A8MUN3 132 aa2.81□□□□□ -1.96
SMAD3-209ENST00000558894 DSCR10P59022 87 aa2.8□□□□□ -1.96
SMAD3-209ENST00000558894 NOTCH2NLQ7Z3S9 236 aa2.8□□□□□ -1.96
SMAD3-209ENST00000558894 C14orf132Q9NPU4 83 aa2.8□□□□□ -1.96
SMAD3-209ENST00000558894 LOC110117498A0A087WWA1 95 aa2.79□□□□□ -1.96
SMAD3-209ENST00000558894 TRAV22A0A0B4J277 110 aa2.79□□□□□ -1.96
SMAD3-209ENST00000558894 MT2AP02795 61 aa2.79□□□□□ -1.96
SMAD3-209ENST00000558894 NREPQ16612 68 aa2.79□□□□□ -1.96
SMAD3-209ENST00000558894 ORMDL1Q9P0S3 153 aa2.79□□□□□ -1.96
SMAD3-209ENST00000558894 NDUFB1O75438 58 aa2.78□□□□□ -1.96
SMAD3-209ENST00000558894 HRES1P13985 223 aa2.78□□□□□ -1.96
SMAD3-209ENST00000558894 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
SMAD3-209ENST00000558894 LINC00472Q9H8W2 130 aa2.78□□□□□ -1.96
SMAD3-209ENST00000558894 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
SMAD3-209ENST00000558894 SNURFQ9Y675 71 aa2.78□□□□□ -1.96
SMAD3-209ENST00000558894 MT1FP04733 61 aa2.77□□□□□ -1.97
SMAD3-209ENST00000558894 MP68P56378 58 aa2.77□□□□□ -1.97
SMAD3-209ENST00000558894 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SMAD3-209ENST00000558894 LINC01554Q52M75 96 aa2.77□□□□□ -1.97
SMAD3-209ENST00000558894 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
SMAD3-209ENST00000558894 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
SMAD3-209ENST00000558894 LOC101927531A0A1B0GV80 90 aa2.76□□□□□ -1.97
SMAD3-209ENST00000558894 LINC00313P59037 77 aa2.76□□□□□ -1.97
SMAD3-209ENST00000558894 Q5VV11 94 aa2.76□□□□□ -1.97
SMAD3-209ENST00000558894 KRTAP9-3Q9BYQ3 159 aa2.76□□□□□ -1.97
SMAD3-209ENST00000558894 A0A1B0GW54 56 aa2.75□□□□□ -1.97
SMAD3-209ENST00000558894 IGKV4-1P06312 121 aa2.75□□□□□ -1.97
SMAD3-209ENST00000558894 DEFB116Q30KQ4 102 aa2.75□□□□□ -1.97
SMAD3-209ENST00000558894 KRTAP3-1Q9BYR8 98 aa2.75□□□□□ -1.97
SMAD3-209ENST00000558894 HCG22E2RYF7 251 aa2.74□□□□□ -1.97
SMAD3-209ENST00000558894 BPY2O14599 106 aa2.74□□□□□ -1.97
SMAD3-209ENST00000558894 Q6ZQT0 140 aa2.74□□□□□ -1.97
SMAD3-209ENST00000558894 C1orf64Q8NEQ6 169 aa2.74□□□□□ -1.97
SMAD3-209ENST00000558894 OCR1Q9BZK8 76 aa2.74□□□□□ -1.97
SMAD3-209ENST00000558894 PSPHP1O15172 72 aa2.73□□□□□ -1.97
SMAD3-209ENST00000558894 SPANXA2-OT1Q8N9U9 137 aa2.73□□□□□ -1.97
SMAD3-209ENST00000558894 IGHV6-1A0A0B4J1U7 121 aa2.72□□□□□ -1.97
SMAD3-209ENST00000558894 CHKB-CPT1BH3BT56 60 aa2.72□□□□□ -1.97
SMAD3-209ENST00000558894 ZCCHC13Q8WW36 166 aaKnown RBP2.72□□□□□ -1.97
SMAD3-209ENST00000558894 KRTAP4-9Q9BYQ8 210 aa2.72□□□□□ -1.97
SMAD3-209ENST00000558894 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
SMAD3-209ENST00000558894 H3BPC8 53 aa2.71□□□□□ -1.98
SMAD3-209ENST00000558894 CASC2Q6XLA1 102 aa2.71□□□□□ -1.98
SMAD3-209ENST00000558894 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
SMAD3-209ENST00000558894 Q8N9P0 234 aaPredicted RBP2.7□□□□□ -1.98
SMAD3-209ENST00000558894 SPTSSBQ8NFR3 76 aa2.7□□□□□ -1.98
SMAD3-209ENST00000558894 A6NED7 52 aa2.69□□□□□ -1.98
SMAD3-209ENST00000558894 SPINK7P58062 85 aa2.68□□□□□ -1.98
SMAD3-209ENST00000558894 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
SMAD3-209ENST00000558894 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
SMAD3-209ENST00000558894 LINC00208Q96KT6 92 aa2.67□□□□□ -1.98
SMAD3-209ENST00000558894 PRR15LQ9BU68 103 aa2.67□□□□□ -1.98
SMAD3-209ENST00000558894 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
SMAD3-209ENST00000558894 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
SMAD3-209ENST00000558894 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
SMAD3-209ENST00000558894 A8MWP4 228 aa2.64□□□□□ -1.99
SMAD3-209ENST00000558894 MMP24-AS1A0A0U1RRL7 71 aa2.63□□□□□ -1.99
SMAD3-209ENST00000558894 WFDC13Q8IUB5 93 aa2.63□□□□□ -1.99
SMAD3-209ENST00000558894 A8MU10 97 aa2.62□□□□□ -1.99
SMAD3-209ENST00000558894 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
SMAD3-209ENST00000558894 KRTAP2-3P0C7H8 128 aa2.61□□□□□ -1.99
SMAD3-209ENST00000558894 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
SMAD3-209ENST00000558894 Q5W150 140 aa2.6□□□□□ -1.99
SMAD3-209ENST00000558894 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
SMAD3-209ENST00000558894 MRPL34Q9BQ48 92 aaKnown RBP2.6□□□□□ -1.99
SMAD3-209ENST00000558894 K7EQZ3 153 aa2.59□□□□□ -1.99
SMAD3-209ENST00000558894 H0Y9P7 68 aa2.58□□□□□ -2
SMAD3-209ENST00000558894 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
SMAD3-209ENST00000558894 COA5Q86WW8 74 aa2.58□□□□□ -2
SMAD3-209ENST00000558894 ROMO1P60602 79 aa2.56□□□□□ -2
SMAD3-209ENST00000558894 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
SMAD3-209ENST00000558894 SPATA8Q6RVD6 105 aa2.55□□□□□ -2
SMAD3-209ENST00000558894 Q8N9L7 120 aa2.55□□□□□ -2
SMAD3-209ENST00000558894 PRAC1Q96KF2 57 aa2.55□□□□□ -2
SMAD3-209ENST00000558894 IGKV2D-30A0A075B6S6 120 aa2.53□□□□□ -2
SMAD3-209ENST00000558894 IGKV2-30P06310 120 aa2.53□□□□□ -2
SMAD3-209ENST00000558894 MT1BP07438 61 aa2.53□□□□□ -2
SMAD3-209ENST00000558894 KRTAP15-1Q3LI76 137 aa2.52□□□□□ -2.01
SMAD3-209ENST00000558894 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
SMAD3-209ENST00000558894 UQCR11O14957 56 aa2.51□□□□□ -2.01
SMAD3-209ENST00000558894 KRTAP19-8Q3LI54 63 aa2.51□□□□□ -2.01
SMAD3-209ENST00000558894 CSAG1Q6PB30 78 aa2.51□□□□□ -2.01
SMAD3-209ENST00000558894 MIR22HGQ0VDD5 57 aa2.5□□□□□ -2.01
SMAD3-209ENST00000558894 SPRR2GQ9BYE4 73 aa2.5□□□□□ -2.01
SMAD3-209ENST00000558894 TP53AIP1Q9HCN2 124 aa2.5□□□□□ -2.01
SMAD3-209ENST00000558894 ADM2Q7Z4H4 148 aa2.49□□□□□ -2.01
SMAD3-209ENST00000558894 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
SMAD3-209ENST00000558894 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
SMAD3-209ENST00000558894 KRTAP25-1Q3LHN0 102 aa2.48□□□□□ -2.01
SMAD3-209ENST00000558894 DMAC1Q96GE9 116 aa2.47□□□□□ -2.01
SMAD3-209ENST00000558894 KRTAP10-5P60370 271 aa2.46□□□□□ -2.02
SMAD3-209ENST00000558894 S4R3F8 94 aa2.46□□□□□ -2.02
SMAD3-209ENST00000558894 K7ERS5 55 aa2.45□□□□□ -2.02
SMAD3-209ENST00000558894 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
SMAD3-209ENST00000558894 A0A1B0GU69 56 aa2.44□□□□□ -2.02
SMAD3-209ENST00000558894 ACYP2P14621 99 aa2.44□□□□□ -2.02
SMAD3-209ENST00000558894 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms