RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 KMT2DO14686 5537 aa4.01□□□□□ -1.77
GTF2A1-204ENST00000556268 MMP24-AS1A0A0U1RRL7 71 aa4□□□□□ -1.77
GTF2A1-204ENST00000556268 SCGB1C2P0DMR2 95 aa4□□□□□ -1.77
GTF2A1-204ENST00000556268 PDE6GP18545 87 aa3.99□□□□□ -1.77
GTF2A1-204ENST00000556268 Q5VV11 94 aa3.99□□□□□ -1.77
GTF2A1-204ENST00000556268 Q5W150 140 aa3.99□□□□□ -1.77
GTF2A1-204ENST00000556268 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
GTF2A1-204ENST00000556268 JMJD7-PLA2G4BH0Y9G9 81 aa3.98□□□□□ -1.77
GTF2A1-204ENST00000556268 CXCL6P80162 114 aa3.97□□□□□ -1.77
GTF2A1-204ENST00000556268 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
GTF2A1-204ENST00000556268 NREPQ16612 68 aa3.96□□□□□ -1.78
GTF2A1-204ENST00000556268 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
GTF2A1-204ENST00000556268 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
GTF2A1-204ENST00000556268 C4orf26Q17RF5 130 aa3.94□□□□□ -1.78
GTF2A1-204ENST00000556268 PYY3Q5JQD4 70 aa3.94□□□□□ -1.78
GTF2A1-204ENST00000556268 C7orf65Q6ZTY9 151 aa3.94□□□□□ -1.78
GTF2A1-204ENST00000556268 NDUFS5O43920 106 aa3.93□□□□□ -1.78
GTF2A1-204ENST00000556268 C5orf47Q569G3 176 aa3.93□□□□□ -1.78
GTF2A1-204ENST00000556268 FAM236AA0A1B0GUQ0 79 aa3.92□□□□□ -1.78
GTF2A1-204ENST00000556268 FAM236BA0A1B0GV22 79 aa3.92□□□□□ -1.78
GTF2A1-204ENST00000556268 K7EQZ3 153 aa3.92□□□□□ -1.78
GTF2A1-204ENST00000556268 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
GTF2A1-204ENST00000556268 UQCR10Q9UDW1 63 aa3.92□□□□□ -1.78
GTF2A1-204ENST00000556268 ATXN8Q156A1 80 aa3.91□□□□□ -1.78
GTF2A1-204ENST00000556268 C14orf132Q9NPU4 83 aa3.91□□□□□ -1.78
GTF2A1-204ENST00000556268 KLKP1Q107X0 134 aa3.88□□□□□ -1.79
GTF2A1-204ENST00000556268 LCA10Q71F78 164 aa3.87□□□□□ -1.79
GTF2A1-204ENST00000556268 S4R3F8 94 aa3.87□□□□□ -1.79
GTF2A1-204ENST00000556268 HCG22E2RYF7 251 aa3.85□□□□□ -1.79
GTF2A1-204ENST00000556268 BPY2O14599 106 aa3.85□□□□□ -1.79
GTF2A1-204ENST00000556268 CASC2Q6XLA1 102 aa3.84□□□□□ -1.79
GTF2A1-204ENST00000556268 C1orf64Q8NEQ6 169 aa3.84□□□□□ -1.79
GTF2A1-204ENST00000556268 NAA38Q9BRA0 125 aaKnown RBP3.84□□□□□ -1.79
GTF2A1-204ENST00000556268 CRIPTQ9P021 101 aa3.84□□□□□ -1.79
GTF2A1-204ENST00000556268 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
GTF2A1-204ENST00000556268 Q8N9L7 120 aa3.81□□□□□ -1.8
GTF2A1-204ENST00000556268 SPRR2FQ96RM1 72 aa3.81□□□□□ -1.8
GTF2A1-204ENST00000556268 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
GTF2A1-204ENST00000556268 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
GTF2A1-204ENST00000556268 M0R143 59 aa3.79□□□□□ -1.8
GTF2A1-204ENST00000556268 SPRR2EP22531 72 aa3.79□□□□□ -1.8
GTF2A1-204ENST00000556268 SPRR2BP35325 72 aa3.79□□□□□ -1.8
GTF2A1-204ENST00000556268 SPRR2AP35326 72 aa3.79□□□□□ -1.8
GTF2A1-204ENST00000556268 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
GTF2A1-204ENST00000556268 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
GTF2A1-204ENST00000556268 IMUPQ9GZP8 106 aa3.78□□□□□ -1.8
GTF2A1-204ENST00000556268 H3BT86 120 aa3.77□□□□□ -1.81
GTF2A1-204ENST00000556268 A0A087WVE0 104 aa3.74□□□□□ -1.81
GTF2A1-204ENST00000556268 MT1XP80297 61 aa3.74□□□□□ -1.81
GTF2A1-204ENST00000556268 H0YAA0 97 aa3.73□□□□□ -1.81
GTF2A1-204ENST00000556268 TP53AIP1Q9HCN2 124 aa3.73□□□□□ -1.81
GTF2A1-204ENST00000556268 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
GTF2A1-204ENST00000556268 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
GTF2A1-204ENST00000556268 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
GTF2A1-204ENST00000556268 TSTD3H0UI37 97 aa3.7□□□□□ -1.82
GTF2A1-204ENST00000556268 A0A1W2PPM0 123 aa3.67□□□□□ -1.82
GTF2A1-204ENST00000556268 SPRR2DP22532 72 aa3.67□□□□□ -1.82
GTF2A1-204ENST00000556268 UBL5Q9BZL1 73 aa3.67□□□□□ -1.82
GTF2A1-204ENST00000556268 TAX1BP3O14907 124 aa3.66□□□□□ -1.82
GTF2A1-204ENST00000556268 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
GTF2A1-204ENST00000556268 A8MUN3 132 aa3.64□□□□□ -1.83
GTF2A1-204ENST00000556268 NDUFC1O43677 76 aa3.64□□□□□ -1.83
GTF2A1-204ENST00000556268 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
GTF2A1-204ENST00000556268 ADM2Q7Z4H4 148 aa3.63□□□□□ -1.83
GTF2A1-204ENST00000556268 BATFQ16520 125 aa3.62□□□□□ -1.83
GTF2A1-204ENST00000556268 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
GTF2A1-204ENST00000556268 LOC101927531A0A1B0GV80 90 aa3.6□□□□□ -1.83
GTF2A1-204ENST00000556268 TRAV22A0A0B4J277 110 aa3.58□□□□□ -1.84
GTF2A1-204ENST00000556268 SMIM6P0DI80 62 aa3.58□□□□□ -1.84
GTF2A1-204ENST00000556268 SPCS1Q9Y6A9 102 aa3.58□□□□□ -1.84
GTF2A1-204ENST00000556268 K7EP34 96 aa3.57□□□□□ -1.84
GTF2A1-204ENST00000556268 ACYP1P07311 99 aa3.55□□□□□ -1.84
GTF2A1-204ENST00000556268 P0C880 135 aa3.54□□□□□ -1.84
GTF2A1-204ENST00000556268 R4GN34 69 aa3.53□□□□□ -1.84
GTF2A1-204ENST00000556268 UQCRQO14949 82 aa3.52□□□□□ -1.85
GTF2A1-204ENST00000556268 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
GTF2A1-204ENST00000556268 ATOX1O00244 68 aa3.5□□□□□ -1.85
GTF2A1-204ENST00000556268 M0QZ58 72 aa3.49□□□□□ -1.85
GTF2A1-204ENST00000556268 H0Y9P7 68 aa3.48□□□□□ -1.85
GTF2A1-204ENST00000556268 C20orf197Q8N268 126 aa3.48□□□□□ -1.85
GTF2A1-204ENST00000556268 F8W1H4 67 aa3.45□□□□□ -1.86
GTF2A1-204ENST00000556268 ETDBQ3ZM63 59 aa3.44□□□□□ -1.86
GTF2A1-204ENST00000556268 COL5A1-AS1Q5SY13 56 aa3.44□□□□□ -1.86
GTF2A1-204ENST00000556268 LINC01554Q52M75 96 aa3.43□□□□□ -1.86
GTF2A1-204ENST00000556268 LINC00208Q96KT6 92 aa3.43□□□□□ -1.86
GTF2A1-204ENST00000556268 LOC105371267A0A1B0GV96 52 aa3.39□□□□□ -1.87
GTF2A1-204ENST00000556268 ATP5EP2Q5VTU8 51 aa3.39□□□□□ -1.87
GTF2A1-204ENST00000556268 GTF2H5Q6ZYL4 71 aa3.39□□□□□ -1.87
GTF2A1-204ENST00000556268 HIST1H4AP62805 103 aaKnown RBP3.38□□□□□ -1.87
GTF2A1-204ENST00000556268 DMAC1Q96GE9 116 aa3.37□□□□□ -1.87
GTF2A1-204ENST00000556268 FAM240AA0A1B0GVK7 77 aa3.36□□□□□ -1.87
GTF2A1-204ENST00000556268 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
GTF2A1-204ENST00000556268 MP68P56378 58 aa3.35□□□□□ -1.87
GTF2A1-204ENST00000556268 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
GTF2A1-204ENST00000556268 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
GTF2A1-204ENST00000556268 MT1EP04732 61 aa3.33□□□□□ -1.88
GTF2A1-204ENST00000556268 H3BPC8 53 aa3.31□□□□□ -1.88
GTF2A1-204ENST00000556268 TRAV7A0A075B6U4 112 aa3.3□□□□□ -1.88
GTF2A1-204ENST00000556268 MT-ATP8P03928 68 aa3.3□□□□□ -1.88
GTF2A1-204ENST00000556268 LINC00643Q86TS7 51 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms