RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 TRAV22A0A0B4J277 110 aa4.1□□□□□ -1.75
NEK9-206ENST00000555537 K7EQZ3 153 aa4.09□□□□□ -1.75
NEK9-206ENST00000555537 HRES1P13985 223 aa4.09□□□□□ -1.75
NEK9-206ENST00000555537 C1orf64Q8NEQ6 169 aa4.09□□□□□ -1.75
NEK9-206ENST00000555537 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
NEK9-206ENST00000555537 TP53AIP1Q9HCN2 124 aa4.09□□□□□ -1.75
NEK9-206ENST00000555537 RBM12B-AS1Q9P1G2 102 aa4.08□□□□□ -1.76
NEK9-206ENST00000555537 A8MWP4 228 aa4.07□□□□□ -1.76
NEK9-206ENST00000555537 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
NEK9-206ENST00000555537 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
NEK9-206ENST00000555537 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
NEK9-206ENST00000555537 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
NEK9-206ENST00000555537 H0Y9P7 68 aa4.05□□□□□ -1.76
NEK9-206ENST00000555537 NOTCH2NLQ7Z3S9 236 aa4.05□□□□□ -1.76
NEK9-206ENST00000555537 A0A087WSZ3 146 aa4.04□□□□□ -1.76
NEK9-206ENST00000555537 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
NEK9-206ENST00000555537 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
NEK9-206ENST00000555537 LOC101927531A0A1B0GV80 90 aa4.01□□□□□ -1.77
NEK9-206ENST00000555537 WFDC13Q8IUB5 93 aa4.01□□□□□ -1.77
NEK9-206ENST00000555537 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
NEK9-206ENST00000555537 NDUFS5O43920 106 aa4□□□□□ -1.77
NEK9-206ENST00000555537 SEC61GP60059 68 aa4□□□□□ -1.77
NEK9-206ENST00000555537 LINC00313P59037 77 aa3.99□□□□□ -1.77
NEK9-206ENST00000555537 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
NEK9-206ENST00000555537 CHKB-CPT1BH3BT56 60 aa3.97□□□□□ -1.77
NEK9-206ENST00000555537 PSPHP1O15172 72 aa3.97□□□□□ -1.77
NEK9-206ENST00000555537 Q5VV11 94 aa3.97□□□□□ -1.77
NEK9-206ENST00000555537 A8MUN3 132 aa3.96□□□□□ -1.78
NEK9-206ENST00000555537 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
NEK9-206ENST00000555537 COA5Q86WW8 74 aa3.96□□□□□ -1.78
NEK9-206ENST00000555537 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
NEK9-206ENST00000555537 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
NEK9-206ENST00000555537 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
NEK9-206ENST00000555537 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
NEK9-206ENST00000555537 A0A1B0GVX0 72 aa3.94□□□□□ -1.78
NEK9-206ENST00000555537 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
NEK9-206ENST00000555537 C8orf17Q9NRJ1 99 aa3.94□□□□□ -1.78
NEK9-206ENST00000555537 A6NED7 52 aa3.93□□□□□ -1.78
NEK9-206ENST00000555537 C8orf87E5RJ46 101 aa3.93□□□□□ -1.78
NEK9-206ENST00000555537 DEFB116Q30KQ4 102 aa3.93□□□□□ -1.78
NEK9-206ENST00000555537 SPINK7P58062 85 aa3.92□□□□□ -1.78
NEK9-206ENST00000555537 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
NEK9-206ENST00000555537 A6NN06 94 aa3.91□□□□□ -1.78
NEK9-206ENST00000555537 IGHV6-1A0A0B4J1U7 121 aa3.9□□□□□ -1.79
NEK9-206ENST00000555537 ACYP2P14621 99 aa3.88□□□□□ -1.79
NEK9-206ENST00000555537 C7orf65Q6ZTY9 151 aa3.88□□□□□ -1.79
NEK9-206ENST00000555537 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
NEK9-206ENST00000555537 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
NEK9-206ENST00000555537 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
NEK9-206ENST00000555537 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
NEK9-206ENST00000555537 SPTSSBQ8NFR3 76 aa3.85□□□□□ -1.79
NEK9-206ENST00000555537 KMT2DO14686 5537 aa3.85□□□□□ -1.79
NEK9-206ENST00000555537 MT1BP07438 61 aa3.84□□□□□ -1.79
NEK9-206ENST00000555537 LCA10Q71F78 164 aa3.83□□□□□ -1.8
NEK9-206ENST00000555537 DMAC1Q96GE9 116 aa3.83□□□□□ -1.8
NEK9-206ENST00000555537 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
NEK9-206ENST00000555537 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
NEK9-206ENST00000555537 A0A1B0GU69 56 aa3.78□□□□□ -1.8
NEK9-206ENST00000555537 UQCR11O14957 56 aa3.77□□□□□ -1.81
NEK9-206ENST00000555537 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
NEK9-206ENST00000555537 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
NEK9-206ENST00000555537 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
NEK9-206ENST00000555537 SPRR2EP22531 72 aa3.74□□□□□ -1.81
NEK9-206ENST00000555537 SPRR2BP35325 72 aa3.74□□□□□ -1.81
NEK9-206ENST00000555537 SPRR2AP35326 72 aa3.74□□□□□ -1.81
NEK9-206ENST00000555537 Q5W150 140 aa3.74□□□□□ -1.81
NEK9-206ENST00000555537 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
NEK9-206ENST00000555537 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
NEK9-206ENST00000555537 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
NEK9-206ENST00000555537 A8MU10 97 aa3.71□□□□□ -1.82
NEK9-206ENST00000555537 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
NEK9-206ENST00000555537 SPRR2GQ9BYE4 73 aa3.71□□□□□ -1.82
NEK9-206ENST00000555537 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
NEK9-206ENST00000555537 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
NEK9-206ENST00000555537 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
NEK9-206ENST00000555537 K7ERS5 55 aa3.61□□□□□ -1.83
NEK9-206ENST00000555537 SPRR2DP22532 72 aa3.61□□□□□ -1.83
NEK9-206ENST00000555537 CSAG1Q6PB30 78 aa3.59□□□□□ -1.83
NEK9-206ENST00000555537 KRTAP8-1Q8IUC2 63 aa3.59□□□□□ -1.83
NEK9-206ENST00000555537 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
NEK9-206ENST00000555537 KRTAP3-1Q9BYR8 98 aa3.59□□□□□ -1.83
NEK9-206ENST00000555537 S4R3F8 94 aa3.58□□□□□ -1.84
NEK9-206ENST00000555537 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
NEK9-206ENST00000555537 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
NEK9-206ENST00000555537 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
NEK9-206ENST00000555537 A0A1B0GU33 70 aa3.53□□□□□ -1.84
NEK9-206ENST00000555537 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
NEK9-206ENST00000555537 MT1XP80297 61 aa3.51□□□□□ -1.85
NEK9-206ENST00000555537 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
NEK9-206ENST00000555537 CRIPTQ9P021 101 aa3.48□□□□□ -1.85
NEK9-206ENST00000555537 PRO2289Q9P1D8 64 aa3.48□□□□□ -1.85
NEK9-206ENST00000555537 H0YAA0 97 aa3.47□□□□□ -1.85
NEK9-206ENST00000555537 ADM2Q7Z4H4 148 aa3.47□□□□□ -1.85
NEK9-206ENST00000555537 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
NEK9-206ENST00000555537 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
NEK9-206ENST00000555537 H3BS24 57 aa3.42□□□□□ -1.86
NEK9-206ENST00000555537 ROMO1P60602 79 aa3.42□□□□□ -1.86
NEK9-206ENST00000555537 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
NEK9-206ENST00000555537 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
NEK9-206ENST00000555537 PLAC4Q8WY50 150 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms