RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 SPRR4Q96PI1 79 aa0.99□□□□□ -2.25
KNTC1-215ENST00000546125 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
KNTC1-215ENST00000546125 A0A087WVE0 104 aa0.98□□□□□ -2.25
KNTC1-215ENST00000546125 SPRR2DP22532 72 aa0.98□□□□□ -2.25
KNTC1-215ENST00000546125 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.98□□□□□ -2.25
KNTC1-215ENST00000546125 LINC00575Q6W349 94 aa0.98□□□□□ -2.25
KNTC1-215ENST00000546125 C6orf201Q7Z4U5 140 aa0.98□□□□□ -2.25
KNTC1-215ENST00000546125 GAFA1Q96PS6 74 aa0.98□□□□□ -2.25
KNTC1-215ENST00000546125 UBE2D4Q9Y2X8 147 aa0.98□□□□□ -2.25
KNTC1-215ENST00000546125 FLGP20930 4061 aaPredicted RBP0.98□□□□□ -2.25
KNTC1-215ENST00000546125 G3V318 75 aa0.97□□□□□ -2.25
KNTC1-215ENST00000546125 NCR3O14931 201 aa0.97□□□□□ -2.25
KNTC1-215ENST00000546125 IFI27P40305 119 aaPredicted RBP0.97□□□□□ -2.25
KNTC1-215ENST00000546125 SPINK13Q1W4C9 94 aa0.97□□□□□ -2.25
KNTC1-215ENST00000546125 PCOTHQ58A44 107 aa0.97□□□□□ -2.25
KNTC1-215ENST00000546125 TMEM263Q8WUH6 116 aaKnown RBP0.97□□□□□ -2.25
KNTC1-215ENST00000546125 PLAC8Q9NZF1 115 aa0.97□□□□□ -2.25
KNTC1-215ENST00000546125 A0A087WXM4 84 aa0.96□□□□□ -2.26
KNTC1-215ENST00000546125 H0Y9P7 68 aa0.96□□□□□ -2.26
KNTC1-215ENST00000546125 GCHFRP30047 84 aa0.96□□□□□ -2.26
KNTC1-215ENST00000546125 SPATA8Q6RVD6 105 aa0.96□□□□□ -2.26
KNTC1-215ENST00000546125 SMIM11BQ8TCY0 68 aa0.96□□□□□ -2.26
KNTC1-215ENST00000546125 PLAC4Q8WY50 150 aa0.96□□□□□ -2.26
KNTC1-215ENST00000546125 LINC00472Q9H8W2 130 aa0.96□□□□□ -2.26
KNTC1-215ENST00000546125 A0A1B0GUT8 65 aa0.95□□□□□ -2.26
KNTC1-215ENST00000546125 COX8AP10176 69 aa0.95□□□□□ -2.26
KNTC1-215ENST00000546125 GNGT1P63211 74 aa0.95□□□□□ -2.26
KNTC1-215ENST00000546125 Q6ZRX8 168 aa0.95□□□□□ -2.26
KNTC1-215ENST00000546125 DEFB107AQ8IZN7 70 aa0.95□□□□□ -2.26
KNTC1-215ENST00000546125 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
KNTC1-215ENST00000546125 GVQW2A0A096LPI5 108 aaPredicted RBP0.94□□□□□ -2.26
KNTC1-215ENST00000546125 TRBV7-4A0A0J9YYF1 115 aa0.94□□□□□ -2.26
KNTC1-215ENST00000546125 NDUFB1O75438 58 aa0.94□□□□□ -2.26
KNTC1-215ENST00000546125 SFTA3P0C7M3 94 aa0.94□□□□□ -2.26
KNTC1-215ENST00000546125 KRTAP19-2Q3LHN2 52 aa0.94□□□□□ -2.26
KNTC1-215ENST00000546125 C10orf113Q5VZT2 155 aa0.94□□□□□ -2.26
KNTC1-215ENST00000546125 KRTAP4-1Q9BYQ7 146 aa0.94□□□□□ -2.26
KNTC1-215ENST00000546125 TRBV6-1A0A0K0K1D8 114 aa0.93□□□□□ -2.26
KNTC1-215ENST00000546125 SPINK7P58062 85 aa0.93□□□□□ -2.26
KNTC1-215ENST00000546125 RPL37P61927 97 aaKnown RBP0.93□□□□□ -2.26
KNTC1-215ENST00000546125 H3BVH4 76 aa0.92□□□□□ -2.26
KNTC1-215ENST00000546125 NDUFA4O00483 81 aa0.92□□□□□ -2.26
KNTC1-215ENST00000546125 DEFB130BP0DP73 79 aa0.92□□□□□ -2.26
KNTC1-215ENST00000546125 DEFB130AP0DP74 79 aa0.92□□□□□ -2.26
KNTC1-215ENST00000546125 KRTAP12-1P59990 96 aa0.92□□□□□ -2.26
KNTC1-215ENST00000546125 SPRR2FQ96RM1 72 aa0.92□□□□□ -2.26
KNTC1-215ENST00000546125 NDUFA3O95167 84 aa0.91□□□□□ -2.26
KNTC1-215ENST00000546125 C3orf79P0CE67 100 aa0.91□□□□□ -2.26
KNTC1-215ENST00000546125 FXYD6P3P58550 94 aa0.91□□□□□ -2.26
KNTC1-215ENST00000546125 ATXN8Q156A1 80 aa0.91□□□□□ -2.26
KNTC1-215ENST00000546125 GNG13Q9P2W3 67 aa0.91□□□□□ -2.26
KNTC1-215ENST00000546125 TRAV21A0A0B4J279 112 aa0.9□□□□□ -2.27
KNTC1-215ENST00000546125 A0A1B0GU69 56 aa0.9□□□□□ -2.27
KNTC1-215ENST00000546125 S100A3P33764 101 aa0.9□□□□□ -2.27
KNTC1-215ENST00000546125 DEFB131AP59861 70 aa0.9□□□□□ -2.27
KNTC1-215ENST00000546125 LINC01556Q5JQF7 62 aa0.9□□□□□ -2.27
KNTC1-215ENST00000546125 FXYD6-FXYD2A0A087WZ82 144 aa0.89□□□□□ -2.27
KNTC1-215ENST00000546125 A0A096LPF7 62 aa0.89□□□□□ -2.27
KNTC1-215ENST00000546125 NREPQ16612 68 aa0.89□□□□□ -2.27
KNTC1-215ENST00000546125 TIMM8BQ9Y5J9 83 aaPredicted RBP0.89□□□□□ -2.27
KNTC1-215ENST00000546125 LINC00959A0A1B0GUT2 108 aa0.87□□□□□ -2.27
KNTC1-215ENST00000546125 MT2AP02795 61 aa0.87□□□□□ -2.27
KNTC1-215ENST00000546125 SSBP3-AS1Q7Z2R9 100 aa0.87□□□□□ -2.27
KNTC1-215ENST00000546125 FAM103A1Q9BTL3 118 aaKnown RBP0.87□□□□□ -2.27
KNTC1-215ENST00000546125 RHPN1-AS1Q9BWJ2 59 aa0.87□□□□□ -2.27
KNTC1-215ENST00000546125 COX7BP24311 80 aa0.86□□□□□ -2.27
KNTC1-215ENST00000546125 PRO0255Q9UI72 69 aa0.86□□□□□ -2.27
KNTC1-215ENST00000546125 MT1FP04733 61 aa0.85□□□□□ -2.27
KNTC1-215ENST00000546125 MT4P47944 62 aa0.85□□□□□ -2.27
KNTC1-215ENST00000546125 RPL38P63173 70 aaKnown RBP0.85□□□□□ -2.27
KNTC1-215ENST00000546125 WFDC10BQ8IUB3 73 aa0.85□□□□□ -2.27
KNTC1-215ENST00000546125 TMEM167AQ8TBQ9 72 aa0.85□□□□□ -2.27
KNTC1-215ENST00000546125 LINC01549A6NIU2 74 aa0.84□□□□□ -2.27
KNTC1-215ENST00000546125 ANGP03950 147 aaKnown RBP0.84□□□□□ -2.27
KNTC1-215ENST00000546125 KLK9Q2XQG4 91 aa0.84□□□□□ -2.27
KNTC1-215ENST00000546125 LEAP2Q969E1 77 aa0.84□□□□□ -2.27
KNTC1-215ENST00000546125 ENHOQ6UWT2 76 aa0.83□□□□□ -2.28
KNTC1-215ENST00000546125 UBL5Q9BZL1 73 aa0.83□□□□□ -2.28
KNTC1-215ENST00000546125 NOP10Q9NPE3 64 aaKnown RBP0.83□□□□□ -2.28
KNTC1-215ENST00000546125 CPSF4LA6NMK7 179 aaKnown RBP0.82□□□□□ -2.28
KNTC1-215ENST00000546125 APELAP0DMC3 54 aa0.82□□□□□ -2.28
KNTC1-215ENST00000546125 PRCDQ00LT1 54 aa0.82□□□□□ -2.28
KNTC1-215ENST00000546125 SPINK9Q5DT21 86 aa0.82□□□□□ -2.28
KNTC1-215ENST00000546125 RPS27LQ71UM5 84 aaKnown RBP0.82□□□□□ -2.28
KNTC1-215ENST00000546125 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
KNTC1-215ENST00000546125 SNRPGP15A8MWD9 76 aa0.81□□□□□ -2.28
KNTC1-215ENST00000546125 PIGYQ3MUY2 71 aa0.81□□□□□ -2.28
KNTC1-215ENST00000546125 CNFNQ9BYD5 112 aa0.81□□□□□ -2.28
KNTC1-215ENST00000546125 TP53AIP1Q9HCN2 124 aa0.81□□□□□ -2.28
KNTC1-215ENST00000546125 CRIPTQ9P021 101 aa0.81□□□□□ -2.28
KNTC1-215ENST00000546125 SYNE1Q8NF91 8797 aaKnown RBP0.8□□□□□ -2.28
KNTC1-215ENST00000546125 I3L2K1 104 aa0.8□□□□□ -2.28
KNTC1-215ENST00000546125 PRH1P02810 166 aa0.8□□□□□ -2.28
KNTC1-215ENST00000546125 FXYD6Q9H0Q3 95 aa0.8□□□□□ -2.28
KNTC1-215ENST00000546125 I3L3M4 83 aa0.79□□□□□ -2.28
KNTC1-215ENST00000546125 ARL14EPLP0DKL9 152 aa0.79□□□□□ -2.28
KNTC1-215ENST00000546125 FCER1GP30273 86 aa0.79□□□□□ -2.28
KNTC1-215ENST00000546125 COX6A2Q02221 97 aa0.79□□□□□ -2.28
KNTC1-215ENST00000546125 KCNQ1DNQ9H478 68 aa0.79□□□□□ -2.28
KNTC1-215ENST00000546125 C10orf95Q9H7T3 257 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms