RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SPRR1BP22528 89 aa1.38□□□□□ -2.19
SNHG1-222ENST00000545308 MEIG1Q5JSS6 88 aa1.38□□□□□ -2.19
SNHG1-222ENST00000545308 MRPL54Q6P161 138 aaKnown RBP1.38□□□□□ -2.19
SNHG1-222ENST00000545308 V9GYV3 84 aa1.38□□□□□ -2.19
SNHG1-222ENST00000545308 TRBV10-3A0A0K0K1G6 114 aa1.37□□□□□ -2.19
SNHG1-222ENST00000545308 MYMXA0A1B0GTQ4 84 aa1.37□□□□□ -2.19
SNHG1-222ENST00000545308 A6NN06 94 aa1.37□□□□□ -2.19
SNHG1-222ENST00000545308 MT1FP04733 61 aa1.37□□□□□ -2.19
SNHG1-222ENST00000545308 ADCYAP1P18509 176 aa1.37□□□□□ -2.19
SNHG1-222ENST00000545308 Q96NJ1 140 aa1.37□□□□□ -2.19
SNHG1-222ENST00000545308 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
SNHG1-222ENST00000545308 F8WEM9 126 aa1.36□□□□□ -2.19
SNHG1-222ENST00000545308 OCIAD2Q56VL3 154 aa1.36□□□□□ -2.19
SNHG1-222ENST00000545308 TMEM170BQ5T4T1 132 aa1.36□□□□□ -2.19
SNHG1-222ENST00000545308 SMCO4Q9NRQ5 59 aa1.36□□□□□ -2.19
SNHG1-222ENST00000545308 SMIM13P0DJ93 91 aa1.35□□□□□ -2.19
SNHG1-222ENST00000545308 IGLC3P0DOY3 106 aa1.35□□□□□ -2.19
SNHG1-222ENST00000545308 ADIRFQ15847 76 aa1.35□□□□□ -2.19
SNHG1-222ENST00000545308 Q6JHZ5 121 aa1.35□□□□□ -2.19
SNHG1-222ENST00000545308 DEFB105AQ8NG35 78 aa1.35□□□□□ -2.19
SNHG1-222ENST00000545308 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
SNHG1-222ENST00000545308 PEA15Q15121 130 aa1.34□□□□□ -2.19
SNHG1-222ENST00000545308 ATOH7Q8N100 152 aa1.34□□□□□ -2.19
SNHG1-222ENST00000545308 S100A1P23297 94 aa1.33□□□□□ -2.2
SNHG1-222ENST00000545308 COX7BP24311 80 aa1.33□□□□□ -2.2
SNHG1-222ENST00000545308 BAGE3Q86Y29 109 aa1.33□□□□□ -2.2
SNHG1-222ENST00000545308 TRAV13-2A0A0B4J235 113 aa1.32□□□□□ -2.2
SNHG1-222ENST00000545308 LINC01546A6NGU7 62 aa1.32□□□□□ -2.2
SNHG1-222ENST00000545308 IGKCP01834 107 aa1.32□□□□□ -2.2
SNHG1-222ENST00000545308 Q6ZQY7 126 aa1.32□□□□□ -2.2
SNHG1-222ENST00000545308 COPS9Q8WXC6 57 aa1.32□□□□□ -2.2
SNHG1-222ENST00000545308 TRBV7-7A0A0K0K1E9 115 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 FAM236AA0A1B0GUQ0 79 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 FAM236BA0A1B0GV22 79 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 SNCGO76070 127 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 C3orf79P0CE67 100 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 SPRR2EP22531 72 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 SPRR2BP35325 72 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 SPRR2AP35326 72 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 ELOF1P60002 83 aaKnown RBP1.31□□□□□ -2.2
SNHG1-222ENST00000545308 Q5VV11 94 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 CSAG1Q6PB30 78 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 PPDPFLQ8WWR9 84 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 DMAC1Q96GE9 116 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 SPANXDQ9BXN6 97 aa1.31□□□□□ -2.2
SNHG1-222ENST00000545308 NEBP20929 6669 aa1.3□□□□□ -2.2
SNHG1-222ENST00000545308 KMT2DO14686 5537 aa1.3□□□□□ -2.2
SNHG1-222ENST00000545308 IGLV5-48A0A075B6I7 105 aa1.3□□□□□ -2.2
SNHG1-222ENST00000545308 PDE6GP18545 87 aa1.3□□□□□ -2.2
SNHG1-222ENST00000545308 S100PP25815 95 aa1.3□□□□□ -2.2
SNHG1-222ENST00000545308 SNHG12Q9BXW3 62 aa1.3□□□□□ -2.2
SNHG1-222ENST00000545308 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
SNHG1-222ENST00000545308 LINC00575Q6W349 94 aa1.29□□□□□ -2.2
SNHG1-222ENST00000545308 DSCR8Q96T75 97 aa1.29□□□□□ -2.2
SNHG1-222ENST00000545308 SEC11CQ9BY50 192 aa1.29□□□□□ -2.2
SNHG1-222ENST00000545308 A0A1B0GV90 55 aa1.28□□□□□ -2.2
SNHG1-222ENST00000545308 SPRR2FQ96RM1 72 aa1.28□□□□□ -2.2
SNHG1-222ENST00000545308 C12orf57Q99622 126 aa1.28□□□□□ -2.2
SNHG1-222ENST00000545308 CCKP06307 115 aa1.27□□□□□ -2.21
SNHG1-222ENST00000545308 SPRR2DP22532 72 aa1.27□□□□□ -2.21
SNHG1-222ENST00000545308 PLNP26678 52 aa1.27□□□□□ -2.21
SNHG1-222ENST00000545308 SPINK7P58062 85 aa1.27□□□□□ -2.21
SNHG1-222ENST00000545308 H1FX-AS1Q4G0G2 97 aa1.27□□□□□ -2.21
SNHG1-222ENST00000545308 IFI27L1Q96BM0 104 aa1.27□□□□□ -2.21
SNHG1-222ENST00000545308 hADV29S1A0JD25 119 aa1.26□□□□□ -2.21
SNHG1-222ENST00000545308 CCDC179H3BU77 68 aa1.26□□□□□ -2.21
SNHG1-222ENST00000545308 WFDC13Q8IUB5 93 aa1.26□□□□□ -2.21
SNHG1-222ENST00000545308 LINC00308Q8TCZ7 52 aa1.26□□□□□ -2.21
SNHG1-222ENST00000545308 A0A1W2PPM0 123 aa1.25□□□□□ -2.21
SNHG1-222ENST00000545308 IFITM1P13164 125 aa1.25□□□□□ -2.21
SNHG1-222ENST00000545308 NPC2P61916 151 aa1.25□□□□□ -2.21
SNHG1-222ENST00000545308 LOC101927531A0A1B0GV80 90 aa1.24□□□□□ -2.21
SNHG1-222ENST00000545308 NDUFB1O75438 58 aa1.24□□□□□ -2.21
SNHG1-222ENST00000545308 KRTAP19-8Q3LI54 63 aa1.24□□□□□ -2.21
SNHG1-222ENST00000545308 LINC01545Q5VT33 79 aa1.24□□□□□ -2.21
SNHG1-222ENST00000545308 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
SNHG1-222ENST00000545308 C18orf32Q8TCD1 76 aa1.24□□□□□ -2.21
SNHG1-222ENST00000545308 CRIPTQ9P021 101 aa1.24□□□□□ -2.21
SNHG1-222ENST00000545308 LEPROTL1O95214 131 aa1.23□□□□□ -2.21
SNHG1-222ENST00000545308 BVES-AS1Q5T3Y7 98 aa1.23□□□□□ -2.21
SNHG1-222ENST00000545308 C14orf144Q96I85 54 aa1.23□□□□□ -2.21
SNHG1-222ENST00000545308 SPRR2GQ9BYE4 73 aa1.23□□□□□ -2.21
SNHG1-222ENST00000545308 DLEU1O43261 78 aa1.22□□□□□ -2.21
SNHG1-222ENST00000545308 MT1BP07438 61 aa1.22□□□□□ -2.21
SNHG1-222ENST00000545308 PMCHL1Q16048 86 aa1.22□□□□□ -2.21
SNHG1-222ENST00000545308 TRBV7-4A0A0J9YYF1 115 aa1.21□□□□□ -2.22
SNHG1-222ENST00000545308 SMIM11BQ8TCY0 68 aa1.21□□□□□ -2.22
SNHG1-222ENST00000545308 PLAC4Q8WY50 150 aa1.21□□□□□ -2.22
SNHG1-222ENST00000545308 H0YGX0 51 aa1.2□□□□□ -2.22
SNHG1-222ENST00000545308 SMIM6P0DI80 62 aa1.2□□□□□ -2.22
SNHG1-222ENST00000545308 KLKP1Q107X0 134 aa1.2□□□□□ -2.22
SNHG1-222ENST00000545308 DSTQ03001 7570 aaKnown RBP1.19□□□□□ -2.22
SNHG1-222ENST00000545308 K7EQZ3 153 aa1.19□□□□□ -2.22
SNHG1-222ENST00000545308 MUSTN1Q8IVN3 82 aa1.19□□□□□ -2.22
SNHG1-222ENST00000545308 LINC00208Q96KT6 92 aa1.19□□□□□ -2.22
SNHG1-222ENST00000545308 H3BUT2 72 aa1.18□□□□□ -2.22
SNHG1-222ENST00000545308 SPTSSBQ8NFR3 76 aa1.18□□□□□ -2.22
SNHG1-222ENST00000545308 LINC00472Q9H8W2 130 aa1.18□□□□□ -2.22
SNHG1-222ENST00000545308 TMEM218A2RU14 115 aa1.17□□□□□ -2.22
SNHG1-222ENST00000545308 S4R3F8 94 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms