RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 H3BPC8 53 aa6.18□□□□□ -1.42
CAPRIN1-213ENST00000533562 USH2AO75445 5202 aa6.18□□□□□ -1.42
CAPRIN1-213ENST00000533562 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
CAPRIN1-213ENST00000533562 ZCCHC13Q8WW36 166 aaKnown RBP6.16□□□□□ -1.42
CAPRIN1-213ENST00000533562 MT2AP02795 61 aa6.15□□□□□ -1.42
CAPRIN1-213ENST00000533562 SPANXA2-OT1Q8N9U9 137 aa6.15□□□□□ -1.42
CAPRIN1-213ENST00000533562 C1orf64Q8NEQ6 169 aa6.14□□□□□ -1.43
CAPRIN1-213ENST00000533562 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
CAPRIN1-213ENST00000533562 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
CAPRIN1-213ENST00000533562 SPINK7P58062 85 aa6.13□□□□□ -1.43
CAPRIN1-213ENST00000533562 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
CAPRIN1-213ENST00000533562 MP68P56378 58 aa6.12□□□□□ -1.43
CAPRIN1-213ENST00000533562 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
CAPRIN1-213ENST00000533562 Q8N9P0 234 aaPredicted RBP6.12□□□□□ -1.43
CAPRIN1-213ENST00000533562 A8MWP4 228 aa6.11□□□□□ -1.43
CAPRIN1-213ENST00000533562 MT1FP04733 61 aa6.1□□□□□ -1.43
CAPRIN1-213ENST00000533562 HCG22E2RYF7 251 aa6.09□□□□□ -1.43
CAPRIN1-213ENST00000533562 C8orf17Q9NRJ1 99 aa6.09□□□□□ -1.43
CAPRIN1-213ENST00000533562 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
CAPRIN1-213ENST00000533562 KRTAP19-4Q3LI73 84 aa6.06□□□□□ -1.44
CAPRIN1-213ENST00000533562 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
CAPRIN1-213ENST00000533562 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
CAPRIN1-213ENST00000533562 LOC101927531A0A1B0GV80 90 aa6.04□□□□□ -1.44
CAPRIN1-213ENST00000533562 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
CAPRIN1-213ENST00000533562 PSPHP1O15172 72 aa6.03□□□□□ -1.44
CAPRIN1-213ENST00000533562 Q5VV11 94 aa6.03□□□□□ -1.44
CAPRIN1-213ENST00000533562 WFDC13Q8IUB5 93 aa6.03□□□□□ -1.44
CAPRIN1-213ENST00000533562 LINC00208Q96KT6 92 aa6.03□□□□□ -1.44
CAPRIN1-213ENST00000533562 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
CAPRIN1-213ENST00000533562 CHKB-CPT1BH3BT56 60 aa6.02□□□□□ -1.45
CAPRIN1-213ENST00000533562 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
CAPRIN1-213ENST00000533562 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
CAPRIN1-213ENST00000533562 A8MUN3 132 aa6□□□□□ -1.45
CAPRIN1-213ENST00000533562 MRPL34Q9BQ48 92 aaKnown RBP6□□□□□ -1.45
CAPRIN1-213ENST00000533562 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
CAPRIN1-213ENST00000533562 LCA10Q71F78 164 aa5.98□□□□□ -1.45
CAPRIN1-213ENST00000533562 Q8N9L7 120 aa5.98□□□□□ -1.45
CAPRIN1-213ENST00000533562 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
CAPRIN1-213ENST00000533562 A6NN06 94 aa5.96□□□□□ -1.46
CAPRIN1-213ENST00000533562 A6NED7 52 aa5.95□□□□□ -1.46
CAPRIN1-213ENST00000533562 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
CAPRIN1-213ENST00000533562 K7EQZ3 153 aa5.94□□□□□ -1.46
CAPRIN1-213ENST00000533562 H1FX-AS1Q4G0G2 97 aa5.94□□□□□ -1.46
CAPRIN1-213ENST00000533562 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
CAPRIN1-213ENST00000533562 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
CAPRIN1-213ENST00000533562 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
CAPRIN1-213ENST00000533562 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
CAPRIN1-213ENST00000533562 H0Y9P7 68 aa5.9□□□□□ -1.46
CAPRIN1-213ENST00000533562 IGKV2D-30A0A075B6S6 120 aa5.89□□□□□ -1.47
CAPRIN1-213ENST00000533562 IGKV2-30P06310 120 aa5.89□□□□□ -1.47
CAPRIN1-213ENST00000533562 CASC2Q6XLA1 102 aa5.89□□□□□ -1.47
CAPRIN1-213ENST00000533562 TP53AIP1Q9HCN2 124 aa5.89□□□□□ -1.47
CAPRIN1-213ENST00000533562 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
CAPRIN1-213ENST00000533562 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-213ENST00000533562 Q5W150 140 aa5.86□□□□□ -1.47
CAPRIN1-213ENST00000533562 COA5Q86WW8 74 aa5.86□□□□□ -1.47
CAPRIN1-213ENST00000533562 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
CAPRIN1-213ENST00000533562 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
CAPRIN1-213ENST00000533562 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
CAPRIN1-213ENST00000533562 A8MU10 97 aa5.71□□□□□ -1.5
CAPRIN1-213ENST00000533562 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
CAPRIN1-213ENST00000533562 S4R3F8 94 aa5.69□□□□□ -1.5
CAPRIN1-213ENST00000533562 ACYP2P14621 99 aa5.68□□□□□ -1.5
CAPRIN1-213ENST00000533562 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
CAPRIN1-213ENST00000533562 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
CAPRIN1-213ENST00000533562 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
CAPRIN1-213ENST00000533562 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
CAPRIN1-213ENST00000533562 UQCR11O14957 56 aa5.6□□□□□ -1.51
CAPRIN1-213ENST00000533562 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
CAPRIN1-213ENST00000533562 A0A1B0GU69 56 aa5.58□□□□□ -1.52
CAPRIN1-213ENST00000533562 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
CAPRIN1-213ENST00000533562 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
CAPRIN1-213ENST00000533562 MT1BP07438 61 aa5.56□□□□□ -1.52
CAPRIN1-213ENST00000533562 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
CAPRIN1-213ENST00000533562 DMAC1Q96GE9 116 aa5.55□□□□□ -1.52
CAPRIN1-213ENST00000533562 CRIPTQ9P021 101 aa5.51□□□□□ -1.53
CAPRIN1-213ENST00000533562 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
CAPRIN1-213ENST00000533562 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
CAPRIN1-213ENST00000533562 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
CAPRIN1-213ENST00000533562 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
CAPRIN1-213ENST00000533562 NEBP20929 6669 aa5.47□□□□□ -1.53
CAPRIN1-213ENST00000533562 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
CAPRIN1-213ENST00000533562 H0YAA0 97 aa5.41□□□□□ -1.54
CAPRIN1-213ENST00000533562 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
CAPRIN1-213ENST00000533562 KRTAP5-9P26371 169 aa5.35□□□□□ -1.55
CAPRIN1-213ENST00000533562 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
CAPRIN1-213ENST00000533562 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
CAPRIN1-213ENST00000533562 ROMO1P60602 79 aa5.34□□□□□ -1.55
CAPRIN1-213ENST00000533562 KMT2DO14686 5537 aa5.34□□□□□ -1.56
CAPRIN1-213ENST00000533562 K7ERS5 55 aa5.33□□□□□ -1.56
CAPRIN1-213ENST00000533562 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
CAPRIN1-213ENST00000533562 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
CAPRIN1-213ENST00000533562 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
CAPRIN1-213ENST00000533562 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
CAPRIN1-213ENST00000533562 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
CAPRIN1-213ENST00000533562 PLAC4Q8WY50 150 aa5.27□□□□□ -1.57
CAPRIN1-213ENST00000533562 R4GN34 69 aa5.24□□□□□ -1.57
CAPRIN1-213ENST00000533562 MT1XP80297 61 aa5.2□□□□□ -1.58
CAPRIN1-213ENST00000533562 P0C880 135 aa5.18□□□□□ -1.58
CAPRIN1-213ENST00000533562 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms