RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 SPRR2FQ96RM1 72 aa0.39□□□□□ -2.35
KNL1-203ENST00000526913 H3BNG1 76 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 CFAP126Q5VTH2 177 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 BAGE2Q86Y30 109 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 CTXND1A0A1B0GTU2 59 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 UQCR11O14957 56 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 CFDP00746 253 aaPredicted RBP0.38□□□□□ -2.35
KNL1-203ENST00000526913 LINC00643Q86TS7 51 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 TIMM8BQ9Y5J9 83 aaPredicted RBP0.38□□□□□ -2.35
KNL1-203ENST00000526913 TMEM170BQ5T4T1 132 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 ATP5EP2Q5VTU8 51 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 ANKRD36A6QL64 1941 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 KRTAP19-6Q3LI70 58 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 S100A16Q96FQ6 103 aaKnown RBP0.38□□□□□ -2.35
KNL1-203ENST00000526913 H0YGG7 62 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 NDUFB1O75438 58 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 SPINK1P00995 79 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 WFDC2Q14508 124 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 ST20Q9HBF5 79 aa0.38□□□□□ -2.35
KNL1-203ENST00000526913 PEA15Q15121 130 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 ETDBQ3ZM63 59 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 C9orf92A6NGG3 77 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 MT4P47944 62 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 DEFB107AQ8IZN7 70 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 TRBV25-1A0A075B6N4 114 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 H3BQF6 201 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 HMGN2P05204 90 aaKnown RBP0.37□□□□□ -2.35
KNL1-203ENST00000526913 DEFB131AP59861 70 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 SMIM11BQ8TCY0 68 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 C7orf77A4D0Y5 90 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 PRH1P02810 166 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 SSBP3-AS1Q7Z2R9 100 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 SPRR4Q96PI1 79 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 SMIM2Q9BVW6 85 aa0.37□□□□□ -2.35
KNL1-203ENST00000526913 A0A1B0GWA3 101 aa0.36□□□□□ -2.35
KNL1-203ENST00000526913 IFI6P09912 130 aa0.36□□□□□ -2.35
KNL1-203ENST00000526913 CCL22O00626 93 aa0.36□□□□□ -2.35
KNL1-203ENST00000526913 SMCO4Q9NRQ5 59 aa0.36□□□□□ -2.35
KNL1-203ENST00000526913 A0A096LPF7 62 aa0.36□□□□□ -2.35
KNL1-203ENST00000526913 K7EQZ3 153 aa0.36□□□□□ -2.35
KNL1-203ENST00000526913 NOP10Q9NPE3 64 aaKnown RBP0.36□□□□□ -2.35
KNL1-203ENST00000526913 PRO0255Q9UI72 69 aa0.36□□□□□ -2.35
KNL1-203ENST00000526913 GCHFRP30047 84 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 C10orf113Q5VZT2 155 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 CLPSL2Q6UWE3 100 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 MYMXA0A1B0GTQ4 84 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 ETDCA0A1B0GVM5 59 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 UMAD1C9J7I0 102 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 RPL38P63173 70 aaKnown RBP0.35□□□□□ -2.35
KNL1-203ENST00000526913 DEFB114Q30KQ6 69 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 SPINK9Q5DT21 86 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 TMEM263Q8WUH6 116 aaKnown RBP0.35□□□□□ -2.35
KNL1-203ENST00000526913 SPCS1Q9Y6A9 102 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 NMSQ5H8A3 153 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 NDUFA1O15239 70 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 Q6JHZ5 121 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 SPRR2GQ9BYE4 73 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 LINC00959A0A1B0GUT2 108 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 IGLC2P0DOY2 106 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 IGLC3P0DOY3 106 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 S100ZQ8WXG8 99 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 CNFNQ9BYD5 112 aa0.35□□□□□ -2.35
KNL1-203ENST00000526913 TRBV6-1A0A0K0K1D8 114 aa0.34□□□□□ -2.35
KNL1-203ENST00000526913 PIGYQ3MUY2 71 aa0.34□□□□□ -2.35
KNL1-203ENST00000526913 CEBPZOSA8MTT3 80 aa0.34□□□□□ -2.36
KNL1-203ENST00000526913 ARMS2P0C7Q2 107 aa0.34□□□□□ -2.36
KNL1-203ENST00000526913 DEFB106AQ8N104 65 aa0.34□□□□□ -2.36
KNL1-203ENST00000526913 A0A1B0GUT8 65 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 D6R8Y8 96 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 LEPROTL1O95214 131 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 SPATA8Q6RVD6 105 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 MUSTN1Q8IVN3 82 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 S4R3F8 94 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 NMES1Q9C002 83 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 LINC01546A6NGU7 62 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 CPSF4LA6NMK7 179 aaKnown RBP0.33□□□□□ -2.36
KNL1-203ENST00000526913 C18orf32Q8TCD1 76 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 H0Y9P7 68 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 IFI27P40305 119 aaPredicted RBP0.33□□□□□ -2.36
KNL1-203ENST00000526913 SERF2P84101 59 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 KRTAP19-3Q7Z4W3 81 aa0.33□□□□□ -2.36
KNL1-203ENST00000526913 H0YAA0 97 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 SPRR1BP22528 89 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 BVES-AS1Q5T3Y7 98 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 COX8AP10176 69 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 FCER1GP30273 86 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 GAFA1Q96PS6 74 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 KAAG1Q9UBP8 84 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 LEAP2Q969E1 77 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 KRTAP4-1Q9BYQ7 146 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 TRBV7-4A0A0J9YYF1 115 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 SMIM13P0DJ93 91 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 MT1HP80294 61 aa0.32□□□□□ -2.36
KNL1-203ENST00000526913 A0A087WXM4 84 aa0.31□□□□□ -2.36
KNL1-203ENST00000526913 H3BUT2 72 aa0.31□□□□□ -2.36
KNL1-203ENST00000526913 I3L2K1 104 aa0.31□□□□□ -2.36
KNL1-203ENST00000526913 SNRPGP62308 76 aaKnown RBP0.31□□□□□ -2.36
KNL1-203ENST00000526913 GNGT1P63211 74 aa0.31□□□□□ -2.36
KNL1-203ENST00000526913 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
KNL1-203ENST00000526913 HEPN1Q6WQI6 88 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms