RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 A0A0G2JQZ4 141 aa4.98□□□□□ -1.61
CTNNA1-221ENST00000520339 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
CTNNA1-221ENST00000520339 A6NN06 94 aa4.97□□□□□ -1.61
CTNNA1-221ENST00000520339 SNURFQ9Y675 71 aa4.96□□□□□ -1.62
CTNNA1-221ENST00000520339 NREPQ16612 68 aa4.95□□□□□ -1.62
CTNNA1-221ENST00000520339 OCR1Q9BZK8 76 aa4.95□□□□□ -1.62
CTNNA1-221ENST00000520339 TRAV22A0A0B4J277 110 aa4.94□□□□□ -1.62
CTNNA1-221ENST00000520339 A0A1B0GW54 56 aa4.94□□□□□ -1.62
CTNNA1-221ENST00000520339 A0A1W2PNM2 257 aa4.94□□□□□ -1.62
CTNNA1-221ENST00000520339 A8MUN3 132 aa4.94□□□□□ -1.62
CTNNA1-221ENST00000520339 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
CTNNA1-221ENST00000520339 IGFL1Q6UW32 110 aa4.94□□□□□ -1.62
CTNNA1-221ENST00000520339 MT3P25713 68 aa4.93□□□□□ -1.62
CTNNA1-221ENST00000520339 NDUFB1O75438 58 aa4.9□□□□□ -1.63
CTNNA1-221ENST00000520339 KRTAP10-6P60371 365 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-221ENST00000520339 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-221ENST00000520339 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
CTNNA1-221ENST00000520339 BPY2O14599 106 aa4.88□□□□□ -1.63
CTNNA1-221ENST00000520339 Q5VV11 94 aa4.88□□□□□ -1.63
CTNNA1-221ENST00000520339 A0A087WSZ3 146 aa4.87□□□□□ -1.63
CTNNA1-221ENST00000520339 LOC101927531A0A1B0GV80 90 aa4.87□□□□□ -1.63
CTNNA1-221ENST00000520339 C1orf64Q8NEQ6 169 aa4.87□□□□□ -1.63
CTNNA1-221ENST00000520339 HCG22E2RYF7 251 aa4.86□□□□□ -1.63
CTNNA1-221ENST00000520339 MP68P56378 58 aa4.86□□□□□ -1.63
CTNNA1-221ENST00000520339 LINC01554Q52M75 96 aa4.86□□□□□ -1.63
CTNNA1-221ENST00000520339 M0R2T5 61 aa4.85□□□□□ -1.63
CTNNA1-221ENST00000520339 COX6B2Q6YFQ2 88 aa4.85□□□□□ -1.63
CTNNA1-221ENST00000520339 ZCCHC13Q8WW36 166 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-221ENST00000520339 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
CTNNA1-221ENST00000520339 CHKB-CPT1BH3BT56 60 aa4.83□□□□□ -1.64
CTNNA1-221ENST00000520339 PSPHP1O15172 72 aa4.83□□□□□ -1.64
CTNNA1-221ENST00000520339 SPANXA2-OT1Q8N9U9 137 aa4.83□□□□□ -1.64
CTNNA1-221ENST00000520339 LINC00313P59037 77 aa4.81□□□□□ -1.64
CTNNA1-221ENST00000520339 H3BPC8 53 aa4.79□□□□□ -1.64
CTNNA1-221ENST00000520339 IGKV4-1P06312 121 aa4.79□□□□□ -1.64
CTNNA1-221ENST00000520339 SPTSSBQ8NFR3 76 aa4.79□□□□□ -1.64
CTNNA1-221ENST00000520339 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
CTNNA1-221ENST00000520339 Q8N9L7 120 aa4.78□□□□□ -1.64
CTNNA1-221ENST00000520339 LINC00472Q9H8W2 130 aa4.78□□□□□ -1.64
CTNNA1-221ENST00000520339 DSCR10P59022 87 aa4.77□□□□□ -1.65
CTNNA1-221ENST00000520339 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
CTNNA1-221ENST00000520339 CASC2Q6XLA1 102 aa4.77□□□□□ -1.65
CTNNA1-221ENST00000520339 Q96NJ1 140 aa4.77□□□□□ -1.65
CTNNA1-221ENST00000520339 C20orf166-AS1Q96NR2 134 aa4.77□□□□□ -1.65
CTNNA1-221ENST00000520339 A6NED7 52 aa4.76□□□□□ -1.65
CTNNA1-221ENST00000520339 A8MUU9 505 aa4.76□□□□□ -1.65
CTNNA1-221ENST00000520339 A8MWP4 228 aa4.76□□□□□ -1.65
CTNNA1-221ENST00000520339 K7EQZ3 153 aa4.76□□□□□ -1.65
CTNNA1-221ENST00000520339 LINC00208Q96KT6 92 aa4.73□□□□□ -1.65
CTNNA1-221ENST00000520339 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
CTNNA1-221ENST00000520339 LINC01558Q9Y6Z2 57 aa4.73□□□□□ -1.65
CTNNA1-221ENST00000520339 A0A1B0GVX0 72 aa4.71□□□□□ -1.66
CTNNA1-221ENST00000520339 USH2AO75445 5202 aa4.7□□□□□ -1.66
CTNNA1-221ENST00000520339 IGHV6-1A0A0B4J1U7 121 aa4.69□□□□□ -1.66
CTNNA1-221ENST00000520339 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
CTNNA1-221ENST00000520339 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
CTNNA1-221ENST00000520339 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
CTNNA1-221ENST00000520339 A8MU10 97 aa4.67□□□□□ -1.66
CTNNA1-221ENST00000520339 C8orf17Q9NRJ1 99 aa4.67□□□□□ -1.66
CTNNA1-221ENST00000520339 MT2AP02795 61 aa4.63□□□□□ -1.67
CTNNA1-221ENST00000520339 HRES1P13985 223 aa4.63□□□□□ -1.67
CTNNA1-221ENST00000520339 MRPL34Q9BQ48 92 aaKnown RBP4.62□□□□□ -1.67
CTNNA1-221ENST00000520339 MT1FP04733 61 aa4.59□□□□□ -1.67
CTNNA1-221ENST00000520339 TP53AIP1Q9HCN2 124 aa4.59□□□□□ -1.67
CTNNA1-221ENST00000520339 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
CTNNA1-221ENST00000520339 COA5Q86WW8 74 aa4.57□□□□□ -1.68
CTNNA1-221ENST00000520339 H0Y9P7 68 aa4.56□□□□□ -1.68
CTNNA1-221ENST00000520339 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
CTNNA1-221ENST00000520339 SPINK7P58062 85 aa4.52□□□□□ -1.69
CTNNA1-221ENST00000520339 ROMO1P60602 79 aa4.51□□□□□ -1.69
CTNNA1-221ENST00000520339 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
CTNNA1-221ENST00000520339 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
CTNNA1-221ENST00000520339 Q5W150 140 aa4.47□□□□□ -1.69
CTNNA1-221ENST00000520339 SYNE2Q8WXH0 6885 aaKnown RBP4.44□□□□□ -1.7
CTNNA1-221ENST00000520339 CSAG1Q6PB30 78 aa4.44□□□□□ -1.7
CTNNA1-221ENST00000520339 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
CTNNA1-221ENST00000520339 KRTAP19-6Q3LI70 58 aa4.43□□□□□ -1.7
CTNNA1-221ENST00000520339 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
CTNNA1-221ENST00000520339 UQCR11O14957 56 aa4.42□□□□□ -1.7
CTNNA1-221ENST00000520339 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
CTNNA1-221ENST00000520339 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
CTNNA1-221ENST00000520339 H1FX-AS1Q4G0G2 97 aa4.37□□□□□ -1.71
CTNNA1-221ENST00000520339 KRTAP10-12P60413 245 aa4.34□□□□□ -1.71
CTNNA1-221ENST00000520339 DMAC1Q96GE9 116 aa4.34□□□□□ -1.71
CTNNA1-221ENST00000520339 A0A1B0GU69 56 aa4.33□□□□□ -1.72
CTNNA1-221ENST00000520339 ACYP2P14621 99 aa4.33□□□□□ -1.72
CTNNA1-221ENST00000520339 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
CTNNA1-221ENST00000520339 K7ERS5 55 aa4.28□□□□□ -1.72
CTNNA1-221ENST00000520339 P0C880 135 aa4.27□□□□□ -1.73
CTNNA1-221ENST00000520339 NEBP20929 6669 aa4.24□□□□□ -1.73
CTNNA1-221ENST00000520339 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
CTNNA1-221ENST00000520339 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
CTNNA1-221ENST00000520339 MT1BP07438 61 aa4.19□□□□□ -1.74
CTNNA1-221ENST00000520339 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
CTNNA1-221ENST00000520339 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CTNNA1-221ENST00000520339 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
CTNNA1-221ENST00000520339 S4R3F8 94 aa4.16□□□□□ -1.74
CTNNA1-221ENST00000520339 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
CTNNA1-221ENST00000520339 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
CTNNA1-221ENST00000520339 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms