RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 LSM2Q9Y333 95 aaKnown RBP-0.2□□□□□ -2.44
SCARNA16.5-201ENST00000517114 R4GMQ9 66 aa-0.2□□□□□ -2.44
SCARNA16.5-201ENST00000517114 V9GYS6 101 aa-0.2□□□□□ -2.44
SCARNA16.5-201ENST00000517114 BORCS7-ASMTA0A0B4J1R7 106 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 A0A1B0GUT8 65 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FAM240BA0A1B0GVZ2 78 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NAP1L6A6NFF2 107 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LINC01549A6NIU2 74 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TMEM256-PLSCR3K7ERE1 68 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ATOX1O00244 68 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 UQCR11O14957 56 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 INE1O15225 51 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PFDN1O60925 122 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 DEXIO95424 95 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MT-ND4LP03901 98 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 GYPCP04921 128 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H2BJP06899 126 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PLNP26678 52 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FAUP35544 74 aaKnown RBP-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PPP1R2P41236 205 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 GNG4P50150 75 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 DAPP51397 102 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FXYD2P54710 66 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H2BDP58876 126 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 GNG11P61952 73 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LSM6P62312 80 aaKnown RBP-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SELENOWP63302 87 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CATR1Q13166 79 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 COX17Q14061 63 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 VAMP3Q15836 100 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ADIRFQ15847 76 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST2H2BEQ16778 126 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TMEM244Q5VVB8 128 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 RPL22L1Q6P5R6 122 aaKnown RBP-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ZNF720Q7Z2F6 126 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SMIM15Q7Z3B0 74 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 S100A7AQ86SG5 101 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 UBL4BQ8N7F7 174 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LINC00301Q8NCQ3 95 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 BRK1Q8WUW1 75 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 BORCS7Q96B45 105 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TOMM6Q96B49 74 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 C14orf144Q96I85 54 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PPP1R2P1Q96PQ5 205 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H2BMQ99879 126 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ANAPC13Q9BS18 74 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 UBL5Q9BZL1 73 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NCOR1P1Q9H4R4 102 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SAR1AQ9NR31 198 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SMCO4Q9NRQ5 59 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LYRM2Q9NU23 88 aaPredicted RBP-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 GID8Q9NWU2 228 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 C1orf109Q9NX04 203 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CCDC167Q9P0B6 97 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TMEM216Q9P0N5 145 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 COPZ2Q9P299 210 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CACFD1Q9UGQ2 172 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 DNAJC15Q9Y5T4 150 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SAR1BQ9Y6B6 198 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LINC01558Q9Y6Z2 57 aa-0.21□□□□□ -2.44
SCARNA16.5-201ENST00000517114 A0A1W2PRE2 83 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 BBIP1A8MTZ0 92 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FAM25AB3EWG3 89 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FAM25CB3EWG5 89 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FAM25GB3EWG6 89 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CCDC179H3BU77 68 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 GNGT2O14610 69 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CASQ2O14958 399 aaPredicted RBP-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 BIRC5O15392 142 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 DPM2O94777 84 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NDUFB6O95139 128 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 APOC1P02654 83 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SMIM6P0DI80 62 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 COX7CP15954 63 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H2BOP23527 126 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 S100GP29377 79 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 S100A11P31949 105 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H2BBP33778 126 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MAGOHP61326 146 aaKnown RBP-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FABP9Q0Z7S8 132 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ATXN8Q156A1 80 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 WHAMMP3Q1A5X7 153 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 ETDBQ3ZM63 59 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 COL5A1-AS1Q5SY13 56 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 LINC01545Q5VT33 79 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 FUNDC1Q8IVP5 155 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 IFT20Q8IY31 132 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CCDC12Q8WUD4 166 aaPredicted RBP-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SMIM4Q8WVI0 70 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H2BHQ93079 126 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 MAGOHBQ96A72 148 aaKnown RBP-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 NAP1L5Q96NT1 182 aaPredicted RBP-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 HIST1H2BNQ99877 126 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 SMIM7Q9BQ49 75 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 CMC2Q9NRP2 79 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 TMEM167BQ9NRX6 74 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 AHSPQ9NZD4 102 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 PRO1854Q9UHT4 67 aa-0.22□□□□□ -2.44
SCARNA16.5-201ENST00000517114 EFCAB10A6NFE3 127 aa-0.23□□□□□ -2.45
SCARNA16.5-201ENST00000517114 LINC00587B1AMM8 73 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms