RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
SCARNA6.1-201ENST00000516989 A0A087WVE0 104 aa2.94□□□□□ -1.94
SCARNA6.1-201ENST00000516989 HRES1P13985 223 aa2.94□□□□□ -1.94
SCARNA6.1-201ENST00000516989 TP53AIP1Q9HCN2 124 aa2.94□□□□□ -1.94
SCARNA6.1-201ENST00000516989 M0R2T5 61 aa2.93□□□□□ -1.94
SCARNA6.1-201ENST00000516989 MT1HP80294 61 aa2.91□□□□□ -1.94
SCARNA6.1-201ENST00000516989 C7orf65Q6ZTY9 151 aa2.91□□□□□ -1.94
SCARNA6.1-201ENST00000516989 UQCRQO14949 82 aa2.9□□□□□ -1.95
SCARNA6.1-201ENST00000516989 MT-ATP8P03928 68 aa2.9□□□□□ -1.95
SCARNA6.1-201ENST00000516989 SCGB1A1P11684 91 aa2.9□□□□□ -1.95
SCARNA6.1-201ENST00000516989 V9GYY9 64 aa2.89□□□□□ -1.95
SCARNA6.1-201ENST00000516989 TRAV22A0A0B4J277 110 aa2.88□□□□□ -1.95
SCARNA6.1-201ENST00000516989 H0Y9P7 68 aa2.88□□□□□ -1.95
SCARNA6.1-201ENST00000516989 C4orf26Q17RF5 130 aa2.88□□□□□ -1.95
SCARNA6.1-201ENST00000516989 IMUPQ9GZP8 106 aa2.88□□□□□ -1.95
SCARNA6.1-201ENST00000516989 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
SCARNA6.1-201ENST00000516989 SMIM26A0A096LP01 95 aa2.87□□□□□ -1.95
SCARNA6.1-201ENST00000516989 LOC101927531A0A1B0GV80 90 aa2.86□□□□□ -1.95
SCARNA6.1-201ENST00000516989 ATOX1O00244 68 aa2.86□□□□□ -1.95
SCARNA6.1-201ENST00000516989 MP68P56378 58 aa2.86□□□□□ -1.95
SCARNA6.1-201ENST00000516989 H1FX-AS1Q4G0G2 97 aa2.86□□□□□ -1.95
SCARNA6.1-201ENST00000516989 LINC00208Q96KT6 92 aa2.86□□□□□ -1.95
SCARNA6.1-201ENST00000516989 CYP4F30PQ9H0H9 118 aa2.86□□□□□ -1.95
SCARNA6.1-201ENST00000516989 C5orf47Q569G3 176 aa2.85□□□□□ -1.95
SCARNA6.1-201ENST00000516989 C1orf64Q8NEQ6 169 aa2.85□□□□□ -1.95
SCARNA6.1-201ENST00000516989 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
SCARNA6.1-201ENST00000516989 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
SCARNA6.1-201ENST00000516989 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
SCARNA6.1-201ENST00000516989 FAM236AA0A1B0GUQ0 79 aa2.83□□□□□ -1.96
SCARNA6.1-201ENST00000516989 FAM236BA0A1B0GV22 79 aa2.83□□□□□ -1.96
SCARNA6.1-201ENST00000516989 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
SCARNA6.1-201ENST00000516989 H3BPC8 53 aa2.81□□□□□ -1.96
SCARNA6.1-201ENST00000516989 SMIM20Q8N5G0 67 aa2.81□□□□□ -1.96
SCARNA6.1-201ENST00000516989 TRAV7A0A075B6U4 112 aa2.8□□□□□ -1.96
SCARNA6.1-201ENST00000516989 KLKP1Q107X0 134 aa2.8□□□□□ -1.96
SCARNA6.1-201ENST00000516989 A8MU10 97 aa2.78□□□□□ -1.96
SCARNA6.1-201ENST00000516989 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
SCARNA6.1-201ENST00000516989 S4R3F8 94 aa2.78□□□□□ -1.96
SCARNA6.1-201ENST00000516989 PSPHP1O15172 72 aa2.76□□□□□ -1.97
SCARNA6.1-201ENST00000516989 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
SCARNA6.1-201ENST00000516989 CSAG1Q6PB30 78 aa2.76□□□□□ -1.97
SCARNA6.1-201ENST00000516989 LCA10Q71F78 164 aa2.76□□□□□ -1.97
SCARNA6.1-201ENST00000516989 SERP2Q8N6R1 65 aa2.76□□□□□ -1.97
SCARNA6.1-201ENST00000516989 A8MUN3 132 aa2.75□□□□□ -1.97
SCARNA6.1-201ENST00000516989 MT2AP02795 61 aa2.75□□□□□ -1.97
SCARNA6.1-201ENST00000516989 SNURFQ9Y675 71 aa2.75□□□□□ -1.97
SCARNA6.1-201ENST00000516989 C20orf197Q8N268 126 aa2.74□□□□□ -1.97
SCARNA6.1-201ENST00000516989 NDUFC1O43677 76 aa2.73□□□□□ -1.97
SCARNA6.1-201ENST00000516989 MT1FP04733 61 aa2.73□□□□□ -1.97
SCARNA6.1-201ENST00000516989 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
SCARNA6.1-201ENST00000516989 COX7CP15954 63 aa2.71□□□□□ -1.98
SCARNA6.1-201ENST00000516989 DMAC1Q96GE9 116 aa2.71□□□□□ -1.98
SCARNA6.1-201ENST00000516989 NEBP20929 6669 aa2.71□□□□□ -1.98
SCARNA6.1-201ENST00000516989 ACYP2P14621 99 aa2.7□□□□□ -1.98
SCARNA6.1-201ENST00000516989 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
SCARNA6.1-201ENST00000516989 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
SCARNA6.1-201ENST00000516989 ANAPC13Q9BS18 74 aa2.69□□□□□ -1.98
SCARNA6.1-201ENST00000516989 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
SCARNA6.1-201ENST00000516989 USH2AO75445 5202 aa2.68□□□□□ -1.98
SCARNA6.1-201ENST00000516989 CHKB-CPT1BH3BT56 60 aa2.67□□□□□ -1.98
SCARNA6.1-201ENST00000516989 SPANXA2-OT1Q8N9U9 137 aa2.67□□□□□ -1.98
SCARNA6.1-201ENST00000516989 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
SCARNA6.1-201ENST00000516989 ADM2Q7Z4H4 148 aa2.65□□□□□ -1.99
SCARNA6.1-201ENST00000516989 SPTSSBQ8NFR3 76 aa2.64□□□□□ -1.99
SCARNA6.1-201ENST00000516989 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
SCARNA6.1-201ENST00000516989 H0YAA0 97 aa2.63□□□□□ -1.99
SCARNA6.1-201ENST00000516989 CCDC179H3BU77 68 aa2.63□□□□□ -1.99
SCARNA6.1-201ENST00000516989 H7BZZ5 65 aa2.63□□□□□ -1.99
SCARNA6.1-201ENST00000516989 CYSTM1Q9H1C7 97 aa2.63□□□□□ -1.99
SCARNA6.1-201ENST00000516989 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
SCARNA6.1-201ENST00000516989 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
SCARNA6.1-201ENST00000516989 COA5Q86WW8 74 aa2.61□□□□□ -1.99
SCARNA6.1-201ENST00000516989 CRIPTQ9P021 101 aa2.61□□□□□ -1.99
SCARNA6.1-201ENST00000516989 P0C880 135 aa2.58□□□□□ -2
SCARNA6.1-201ENST00000516989 SPRR2GQ9BYE4 73 aa2.58□□□□□ -2
SCARNA6.1-201ENST00000516989 R4GN34 69 aa2.57□□□□□ -2
SCARNA6.1-201ENST00000516989 MUC12Q9UKN1 5478 aa2.57□□□□□ -2
SCARNA6.1-201ENST00000516989 M0QZ58 72 aa2.56□□□□□ -2
SCARNA6.1-201ENST00000516989 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
SCARNA6.1-201ENST00000516989 Q5VV11 94 aa2.56□□□□□ -2
SCARNA6.1-201ENST00000516989 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
SCARNA6.1-201ENST00000516989 ATP5EP56381 51 aaPredicted RBP2.54□□□□□ -2
SCARNA6.1-201ENST00000516989 SERP1Q9Y6X1 66 aa2.54□□□□□ -2
SCARNA6.1-201ENST00000516989 KMT2DO14686 5537 aa2.53□□□□□ -2
SCARNA6.1-201ENST00000516989 MT1BP07438 61 aa2.53□□□□□ -2
SCARNA6.1-201ENST00000516989 KRTAP10-7P60409 375 aaPredicted RBP2.53□□□□□ -2
SCARNA6.1-201ENST00000516989 LINC01554Q52M75 96 aa2.53□□□□□ -2
SCARNA6.1-201ENST00000516989 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
SCARNA6.1-201ENST00000516989 LCE1EQ5T753 118 aa2.53□□□□□ -2
SCARNA6.1-201ENST00000516989 TMEM258P61165 79 aa2.52□□□□□ -2.01
SCARNA6.1-201ENST00000516989 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
SCARNA6.1-201ENST00000516989 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
SCARNA6.1-201ENST00000516989 A0A1B0GU69 56 aa2.49□□□□□ -2.01
SCARNA6.1-201ENST00000516989 A6NN06 94 aa2.49□□□□□ -2.01
SCARNA6.1-201ENST00000516989 K7ERS5 55 aa2.48□□□□□ -2.01
SCARNA6.1-201ENST00000516989 KRTAP12-2P59991 146 aa2.48□□□□□ -2.01
SCARNA6.1-201ENST00000516989 A0A1B0GU33 70 aa2.47□□□□□ -2.01
SCARNA6.1-201ENST00000516989 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
SCARNA6.1-201ENST00000516989 SPATA8Q6RVD6 105 aa2.45□□□□□ -2.02
SCARNA6.1-201ENST00000516989 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms