RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SSBP3-AS1Q7Z2R9 100 aa1.71□□□□□ -2.14
SCARNA13-201ENST00000516672 SPRR4Q96PI1 79 aa1.71□□□□□ -2.14
SCARNA13-201ENST00000516672 KRTAP9-9Q9BYP9 154 aa1.71□□□□□ -2.14
SCARNA13-201ENST00000516672 V9GYY9 64 aa1.71□□□□□ -2.14
SCARNA13-201ENST00000516672 TRAV22A0A0B4J277 110 aa1.7□□□□□ -2.14
SCARNA13-201ENST00000516672 A0A1B0GW54 56 aa1.7□□□□□ -2.14
SCARNA13-201ENST00000516672 SPRR1BP22528 89 aa1.7□□□□□ -2.14
SCARNA13-201ENST00000516672 PRLHP81277 87 aa1.7□□□□□ -2.14
SCARNA13-201ENST00000516672 Q5VV11 94 aa1.7□□□□□ -2.14
SCARNA13-201ENST00000516672 Q8NBF4 154 aa1.7□□□□□ -2.14
SCARNA13-201ENST00000516672 Q9BRP9 147 aa1.7□□□□□ -2.14
SCARNA13-201ENST00000516672 A0A087X002 238 aa1.69□□□□□ -2.14
SCARNA13-201ENST00000516672 LOC100996750A0A140TA64 210 aa1.69□□□□□ -2.14
SCARNA13-201ENST00000516672 K7EQZ3 153 aa1.69□□□□□ -2.14
SCARNA13-201ENST00000516672 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
SCARNA13-201ENST00000516672 SPINK1P00995 79 aa1.69□□□□□ -2.14
SCARNA13-201ENST00000516672 RPS29P62273 56 aaKnown RBP1.69□□□□□ -2.14
SCARNA13-201ENST00000516672 TYMSOSQ8TAI1 123 aa1.69□□□□□ -2.14
SCARNA13-201ENST00000516672 A8MUN3 132 aa1.68□□□□□ -2.14
SCARNA13-201ENST00000516672 CD164Q04900 197 aa1.68□□□□□ -2.14
SCARNA13-201ENST00000516672 PMAIP1Q13794 54 aa1.68□□□□□ -2.14
SCARNA13-201ENST00000516672 KRTAP13-2Q52LG2 175 aa1.68□□□□□ -2.14
SCARNA13-201ENST00000516672 C4orf48Q5BLP8 95 aa1.68□□□□□ -2.14
SCARNA13-201ENST00000516672 Q8N9P0 234 aaPredicted RBP1.68□□□□□ -2.14
SCARNA13-201ENST00000516672 KRTAP4-8A0A0G2JLE6 195 aa1.67□□□□□ -2.14
SCARNA13-201ENST00000516672 HCG22E2RYF7 251 aa1.67□□□□□ -2.14
SCARNA13-201ENST00000516672 PSPHP1O15172 72 aa1.67□□□□□ -2.14
SCARNA13-201ENST00000516672 LINC00304Q8N9R0 145 aa1.67□□□□□ -2.14
SCARNA13-201ENST00000516672 SPANXA2-OT1Q8N9U9 137 aa1.67□□□□□ -2.14
SCARNA13-201ENST00000516672 ANAPC11Q9NYG5 84 aa1.67□□□□□ -2.14
SCARNA13-201ENST00000516672 A0A0G2JQZ4 141 aa1.66□□□□□ -2.14
SCARNA13-201ENST00000516672 LOC101927531A0A1B0GV80 90 aa1.66□□□□□ -2.14
SCARNA13-201ENST00000516672 PCOTHQ58A44 107 aa1.66□□□□□ -2.14
SCARNA13-201ENST00000516672 IGFL1Q6UW32 110 aa1.66□□□□□ -2.14
SCARNA13-201ENST00000516672 LCA10Q71F78 164 aa1.66□□□□□ -2.14
SCARNA13-201ENST00000516672 Q75L30 129 aa1.66□□□□□ -2.14
SCARNA13-201ENST00000516672 IGLV9-49A0A0B4J1Y8 123 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 H0Y9P7 68 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 H3BPC8 53 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 NDUFB1O75438 58 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 MOBPQ13875 183 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 KTN1-AS1Q86SY8 53 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 DEFB105AQ8NG35 78 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 LINC00208Q96KT6 92 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 LIMD2Q9BT23 127 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 RBM12B-AS1Q9P1G2 102 aa1.65□□□□□ -2.15
SCARNA13-201ENST00000516672 MMP24-AS1A0A0U1RRL7 71 aa1.64□□□□□ -2.15
SCARNA13-201ENST00000516672 COA5Q86WW8 74 aa1.64□□□□□ -2.15
SCARNA13-201ENST00000516672 WFDC13Q8IUB5 93 aa1.64□□□□□ -2.15
SCARNA13-201ENST00000516672 PRR15LQ9BU68 103 aa1.64□□□□□ -2.15
SCARNA13-201ENST00000516672 LINC00472Q9H8W2 130 aa1.64□□□□□ -2.15
SCARNA13-201ENST00000516672 A8MWP4 228 aa1.63□□□□□ -2.15
SCARNA13-201ENST00000516672 MP68P56378 58 aa1.63□□□□□ -2.15
SCARNA13-201ENST00000516672 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
SCARNA13-201ENST00000516672 Q96NJ1 140 aa1.63□□□□□ -2.15
SCARNA13-201ENST00000516672 CDC42SE1Q9NRR8 79 aa1.63□□□□□ -2.15
SCARNA13-201ENST00000516672 LINC01558Q9Y6Z2 57 aa1.63□□□□□ -2.15
SCARNA13-201ENST00000516672 A0A087WSZ3 146 aa1.62□□□□□ -2.15
SCARNA13-201ENST00000516672 CHKB-CPT1BH3BT56 60 aa1.62□□□□□ -2.15
SCARNA13-201ENST00000516672 DEFB116Q30KQ4 102 aa1.62□□□□□ -2.15
SCARNA13-201ENST00000516672 CASC2Q6XLA1 102 aa1.62□□□□□ -2.15
SCARNA13-201ENST00000516672 ATP11AUNQ6ZP68 121 aa1.62□□□□□ -2.15
SCARNA13-201ENST00000516672 C7orf65Q6ZTY9 151 aa1.62□□□□□ -2.15
SCARNA13-201ENST00000516672 NDUFS5O43920 106 aa1.61□□□□□ -2.15
SCARNA13-201ENST00000516672 HRES1P13985 223 aa1.61□□□□□ -2.15
SCARNA13-201ENST00000516672 SPINK7P58062 85 aa1.61□□□□□ -2.15
SCARNA13-201ENST00000516672 KRTAP10-5P60370 271 aa1.6□□□□□ -2.15
SCARNA13-201ENST00000516672 A6NED7 52 aa1.59□□□□□ -2.15
SCARNA13-201ENST00000516672 SPTSSBQ8NFR3 76 aa1.59□□□□□ -2.15
SCARNA13-201ENST00000516672 KRTAP4-11Q9BYQ6 195 aa1.59□□□□□ -2.15
SCARNA13-201ENST00000516672 C8orf17Q9NRJ1 99 aa1.59□□□□□ -2.15
SCARNA13-201ENST00000516672 C8orf87E5RJ46 101 aa1.58□□□□□ -2.16
SCARNA13-201ENST00000516672 A0A1B0GVX0 72 aa1.57□□□□□ -2.16
SCARNA13-201ENST00000516672 LINC00313P59037 77 aa1.57□□□□□ -2.16
SCARNA13-201ENST00000516672 Q5W150 140 aa1.57□□□□□ -2.16
SCARNA13-201ENST00000516672 NOTCH2NLQ7Z3S9 236 aa1.57□□□□□ -2.16
SCARNA13-201ENST00000516672 PRAC1Q96KF2 57 aa1.57□□□□□ -2.16
SCARNA13-201ENST00000516672 TP53AIP1Q9HCN2 124 aa1.57□□□□□ -2.16
SCARNA13-201ENST00000516672 ADM2Q7Z4H4 148 aa1.56□□□□□ -2.16
SCARNA13-201ENST00000516672 DMAC1Q96GE9 116 aa1.56□□□□□ -2.16
SCARNA13-201ENST00000516672 MRPL34Q9BQ48 92 aaKnown RBP1.56□□□□□ -2.16
SCARNA13-201ENST00000516672 RPL37P61927 97 aaKnown RBP1.55□□□□□ -2.16
SCARNA13-201ENST00000516672 SPATA8Q6RVD6 105 aa1.55□□□□□ -2.16
SCARNA13-201ENST00000516672 C20orf166-AS1Q96NR2 134 aa1.55□□□□□ -2.16
SCARNA13-201ENST00000516672 IGHV6-1A0A0B4J1U7 121 aa1.54□□□□□ -2.16
SCARNA13-201ENST00000516672 A8MUU9 505 aa1.54□□□□□ -2.16
SCARNA13-201ENST00000516672 C9orf92A6NGG3 77 aa1.53□□□□□ -2.16
SCARNA13-201ENST00000516672 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
SCARNA13-201ENST00000516672 KRTAP16-1A8MUX0 517 aa1.52□□□□□ -2.17
SCARNA13-201ENST00000516672 IGKV2-30P06310 120 aa1.52□□□□□ -2.17
SCARNA13-201ENST00000516672 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
SCARNA13-201ENST00000516672 LINC01554Q52M75 96 aa1.52□□□□□ -2.17
SCARNA13-201ENST00000516672 ACYP2P14621 99 aa1.51□□□□□ -2.17
SCARNA13-201ENST00000516672 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
SCARNA13-201ENST00000516672 MIR22HGQ0VDD5 57 aa1.5□□□□□ -2.17
SCARNA13-201ENST00000516672 CSAG1Q6PB30 78 aa1.5□□□□□ -2.17
SCARNA13-201ENST00000516672 IGKV2D-30A0A075B6S6 120 aa1.49□□□□□ -2.17
SCARNA13-201ENST00000516672 A0A1B0GU69 56 aa1.49□□□□□ -2.17
SCARNA13-201ENST00000516672 H3BS24 57 aa1.49□□□□□ -2.17
SCARNA13-201ENST00000516672 H0YAA0 97 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms