RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 DSTQ03001 7570 aaKnown RBP0.67□□□□□ -2.3
UBR4-217ENST00000497018 A0A087WWC5 75 aa0.67□□□□□ -2.3
UBR4-217ENST00000497018 S100A3P33764 101 aa0.67□□□□□ -2.3
UBR4-217ENST00000497018 MT4P47944 62 aa0.67□□□□□ -2.3
UBR4-217ENST00000497018 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
UBR4-217ENST00000497018 IFI6P09912 130 aa0.66□□□□□ -2.3
UBR4-217ENST00000497018 SPART-AS1P0CW21 52 aa0.66□□□□□ -2.3
UBR4-217ENST00000497018 GCHFRP30047 84 aa0.66□□□□□ -2.3
UBR4-217ENST00000497018 IFI27P40305 119 aaPredicted RBP0.66□□□□□ -2.3
UBR4-217ENST00000497018 FXYD6P3P58550 94 aa0.66□□□□□ -2.3
UBR4-217ENST00000497018 SPINK6Q6UWN8 80 aa0.66□□□□□ -2.3
UBR4-217ENST00000497018 KRTAP4-1Q9BYQ7 146 aa0.66□□□□□ -2.3
UBR4-217ENST00000497018 C10orf95Q9H7T3 257 aa0.66□□□□□ -2.3
UBR4-217ENST00000497018 HMCN1Q96RW7 5635 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 TRAV21A0A0B4J279 112 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 TRBV6-1A0A0K0K1D8 114 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 A0A1B0GUT8 65 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 COX8AP10176 69 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 MINOS1Q5TGZ0 78 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 ATP5EP2Q5VTU8 51 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.65□□□□□ -2.31
UBR4-217ENST00000497018 KRTAP5-4Q6L8H1 288 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 KRTAP5-5Q701N2 237 aaPredicted RBP0.65□□□□□ -2.31
UBR4-217ENST00000497018 S100ZQ8WXG8 99 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 KAAG1Q9UBP8 84 aa0.65□□□□□ -2.31
UBR4-217ENST00000497018 CCL22O00626 93 aa0.64□□□□□ -2.31
UBR4-217ENST00000497018 GNGT1P63211 74 aa0.64□□□□□ -2.31
UBR4-217ENST00000497018 DEFB114Q30KQ6 69 aa0.64□□□□□ -2.31
UBR4-217ENST00000497018 KRTAP19-2Q3LHN2 52 aa0.64□□□□□ -2.31
UBR4-217ENST00000497018 MUC17Q685J3 4493 aa0.64□□□□□ -2.31
UBR4-217ENST00000497018 A0A1B0GU69 56 aa0.63□□□□□ -2.31
UBR4-217ENST00000497018 C3orf79P0CE67 100 aa0.63□□□□□ -2.31
UBR4-217ENST00000497018 SSBP3-AS1Q7Z2R9 100 aa0.63□□□□□ -2.31
UBR4-217ENST00000497018 FLGP20930 4061 aaPredicted RBP0.63□□□□□ -2.31
UBR4-217ENST00000497018 FXYD6-FXYD2A0A087WZ82 144 aa0.62□□□□□ -2.31
UBR4-217ENST00000497018 A0A0D9SG42 100 aa0.62□□□□□ -2.31
UBR4-217ENST00000497018 I3L2K1 104 aa0.62□□□□□ -2.31
UBR4-217ENST00000497018 DNAH8Q96JB1 4490 aa0.62□□□□□ -2.31
UBR4-217ENST00000497018 A0A087WXM4 84 aa0.61□□□□□ -2.31
UBR4-217ENST00000497018 MT2AP02795 61 aa0.61□□□□□ -2.31
UBR4-217ENST00000497018 SPINK9Q5DT21 86 aa0.61□□□□□ -2.31
UBR4-217ENST00000497018 GAFA1Q96PS6 74 aa0.61□□□□□ -2.31
UBR4-217ENST00000497018 NDUFB1O75438 58 aa0.6□□□□□ -2.31
UBR4-217ENST00000497018 MT1FP04733 61 aa0.6□□□□□ -2.31
UBR4-217ENST00000497018 COX7BP24311 80 aa0.6□□□□□ -2.31
UBR4-217ENST00000497018 NREPQ16612 68 aa0.6□□□□□ -2.31
UBR4-217ENST00000497018 LCE1CQ5T751 118 aa0.6□□□□□ -2.31
UBR4-217ENST00000497018 LCE1BQ5T7P3 118 aa0.6□□□□□ -2.31
UBR4-217ENST00000497018 NCBP2-AS2Q69YL0 99 aa0.6□□□□□ -2.31
UBR4-217ENST00000497018 H3BVH4 76 aa0.59□□□□□ -2.31
UBR4-217ENST00000497018 KRTAP5-8O75690 187 aa0.59□□□□□ -2.31
UBR4-217ENST00000497018 SFTA3P0C7M3 94 aa0.59□□□□□ -2.31
UBR4-217ENST00000497018 DEFB130BP0DP73 79 aa0.59□□□□□ -2.31
UBR4-217ENST00000497018 DEFB130AP0DP74 79 aa0.59□□□□□ -2.31
UBR4-217ENST00000497018 KRTAP5-1Q6L8H4 278 aa0.59□□□□□ -2.31
UBR4-217ENST00000497018 KRTAP8-1Q8IUC2 63 aa0.59□□□□□ -2.31
UBR4-217ENST00000497018 CPSF4LA6NMK7 179 aaKnown RBP0.58□□□□□ -2.32
UBR4-217ENST00000497018 ATXN8Q156A1 80 aa0.58□□□□□ -2.32
UBR4-217ENST00000497018 FAM103A1Q9BTL3 118 aaKnown RBP0.58□□□□□ -2.32
UBR4-217ENST00000497018 CNFNQ9BYD5 112 aa0.58□□□□□ -2.32
UBR4-217ENST00000497018 TP53AIP1Q9HCN2 124 aa0.58□□□□□ -2.32
UBR4-217ENST00000497018 CRIPTQ9P021 101 aa0.58□□□□□ -2.32
UBR4-217ENST00000497018 H3BUA1 57 aa0.57□□□□□ -2.32
UBR4-217ENST00000497018 APELAP0DMC3 54 aa0.57□□□□□ -2.32
UBR4-217ENST00000497018 USMG5Q96IX5 58 aa0.57□□□□□ -2.32
UBR4-217ENST00000497018 H3BNG1 76 aa0.56□□□□□ -2.32
UBR4-217ENST00000497018 K7EQZ3 153 aa0.56□□□□□ -2.32
UBR4-217ENST00000497018 DEFB131AP59861 70 aa0.56□□□□□ -2.32
UBR4-217ENST00000497018 COX6A2Q02221 97 aa0.56□□□□□ -2.32
UBR4-217ENST00000497018 ENHOQ6UWT2 76 aa0.56□□□□□ -2.32
UBR4-217ENST00000497018 WFDC10BQ8IUB3 73 aa0.56□□□□□ -2.32
UBR4-217ENST00000497018 A0A096LPF7 62 aa0.55□□□□□ -2.32
UBR4-217ENST00000497018 LINC01549A6NIU2 74 aa0.55□□□□□ -2.32
UBR4-217ENST00000497018 NDUFA4O00483 81 aa0.55□□□□□ -2.32
UBR4-217ENST00000497018 GNG13Q9P2W3 67 aa0.55□□□□□ -2.32
UBR4-217ENST00000497018 OBSCNQ5VST9 7968 aa0.55□□□□□ -2.32
UBR4-217ENST00000497018 RPS27LQ71UM5 84 aaKnown RBP0.54□□□□□ -2.32
UBR4-217ENST00000497018 PIGYQ3MUY2 71 aa0.53□□□□□ -2.32
UBR4-217ENST00000497018 LINC01556Q5JQF7 62 aa0.53□□□□□ -2.32
UBR4-217ENST00000497018 KRTAP4-3Q9BYR4 195 aa0.53□□□□□ -2.32
UBR4-217ENST00000497018 TTTY10Q9BZA0 68 aa0.53□□□□□ -2.32
UBR4-217ENST00000497018 KCNQ1DNQ9H478 68 aa0.53□□□□□ -2.32
UBR4-217ENST00000497018 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
UBR4-217ENST00000497018 SPRR1AP35321 89 aa0.52□□□□□ -2.33
UBR4-217ENST00000497018 KRTAP20-2Q3LI61 65 aa0.52□□□□□ -2.33
UBR4-217ENST00000497018 KRTAP5-2Q701N4 177 aa0.52□□□□□ -2.33
UBR4-217ENST00000497018 Q8IZM0 81 aa0.52□□□□□ -2.33
UBR4-217ENST00000497018 LEAP2Q969E1 77 aa0.52□□□□□ -2.33
UBR4-217ENST00000497018 MRPL34Q9BQ48 92 aaKnown RBP0.52□□□□□ -2.33
UBR4-217ENST00000497018 KRTAP4-4Q9BYR3 166 aa0.52□□□□□ -2.33
UBR4-217ENST00000497018 TIMM8BQ9Y5J9 83 aaPredicted RBP0.52□□□□□ -2.33
UBR4-217ENST00000497018 I3L3M4 83 aa0.51□□□□□ -2.33
UBR4-217ENST00000497018 NDUFA3O95167 84 aa0.51□□□□□ -2.33
UBR4-217ENST00000497018 CRIP1P50238 77 aa0.51□□□□□ -2.33
UBR4-217ENST00000497018 RHPN1-AS1Q9BWJ2 59 aa0.51□□□□□ -2.33
UBR4-217ENST00000497018 NOP10Q9NPE3 64 aaKnown RBP0.51□□□□□ -2.33
UBR4-217ENST00000497018 PRO0255Q9UI72 69 aa0.51□□□□□ -2.33
UBR4-217ENST00000497018 PRH1P02810 166 aa0.5□□□□□ -2.33
UBR4-217ENST00000497018 HTN1P15515 57 aa0.5□□□□□ -2.33
UBR4-217ENST00000497018 SPRR1BP22528 89 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms