RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 UQCR10Q9UDW1 63 aa1.85□□□□□ -2.11
SND1-216ENST00000492840 SPINK8P0C7L1 97 aa1.84□□□□□ -2.11
SND1-216ENST00000492840 CRIP1P50238 77 aa1.84□□□□□ -2.11
SND1-216ENST00000492840 ADIRFQ15847 76 aa1.84□□□□□ -2.11
SND1-216ENST00000492840 PMCHL1Q16048 86 aa1.84□□□□□ -2.11
SND1-216ENST00000492840 C20orf197Q8N268 126 aa1.84□□□□□ -2.11
SND1-216ENST00000492840 PMCHL2Q9BQD1 86 aa1.84□□□□□ -2.11
SND1-216ENST00000492840 VAMP8Q9BV40 100 aa1.84□□□□□ -2.11
SND1-216ENST00000492840 TRAV13-2A0A0B4J235 113 aa1.83□□□□□ -2.12
SND1-216ENST00000492840 SPRR2DP22532 72 aa1.83□□□□□ -2.12
SND1-216ENST00000492840 LINC00575Q6W349 94 aa1.83□□□□□ -2.12
SND1-216ENST00000492840 PPP1R1CQ8WVI7 109 aa1.83□□□□□ -2.12
SND1-216ENST00000492840 SNHG12Q9BXW3 62 aa1.83□□□□□ -2.12
SND1-216ENST00000492840 PRO1933Q9H354 126 aa1.83□□□□□ -2.12
SND1-216ENST00000492840 ELOF1P60002 83 aaKnown RBP1.82□□□□□ -2.12
SND1-216ENST00000492840 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
SND1-216ENST00000492840 SPRR2FQ96RM1 72 aa1.82□□□□□ -2.12
SND1-216ENST00000492840 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
SND1-216ENST00000492840 ARL14EPLP0DKL9 152 aa1.81□□□□□ -2.12
SND1-216ENST00000492840 SEC11AP67812 179 aa1.81□□□□□ -2.12
SND1-216ENST00000492840 SERF2P84101 59 aa1.81□□□□□ -2.12
SND1-216ENST00000492840 BAGE3Q86Y29 109 aa1.81□□□□□ -2.12
SND1-216ENST00000492840 BAGE2Q86Y30 109 aa1.81□□□□□ -2.12
SND1-216ENST00000492840 I3L3M4 83 aa1.8□□□□□ -2.12
SND1-216ENST00000492840 KLKP1Q107X0 134 aa1.8□□□□□ -2.12
SND1-216ENST00000492840 COX7B2Q8TF08 81 aa1.8□□□□□ -2.12
SND1-216ENST00000492840 TMEM167BQ9NRX6 74 aa1.8□□□□□ -2.12
SND1-216ENST00000492840 DSTQ03001 7570 aaKnown RBP1.8□□□□□ -2.12
SND1-216ENST00000492840 A0A1W2PPM0 123 aa1.79□□□□□ -2.12
SND1-216ENST00000492840 GCHFRP30047 84 aa1.79□□□□□ -2.12
SND1-216ENST00000492840 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
SND1-216ENST00000492840 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
SND1-216ENST00000492840 RPL39LQ96EH5 51 aaKnown RBP1.79□□□□□ -2.12
SND1-216ENST00000492840 ST20Q9HBF5 79 aa1.79□□□□□ -2.12
SND1-216ENST00000492840 MANBALQ9NQG1 85 aa1.79□□□□□ -2.12
SND1-216ENST00000492840 FAM213BQ8TBF2 198 aa1.78□□□□□ -2.12
SND1-216ENST00000492840 SMIM13P0DJ93 91 aa1.77□□□□□ -2.13
SND1-216ENST00000492840 IGLC3P0DOY3 106 aa1.77□□□□□ -2.13
SND1-216ENST00000492840 KRTDAPP60985 99 aa1.77□□□□□ -2.13
SND1-216ENST00000492840 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
SND1-216ENST00000492840 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
SND1-216ENST00000492840 CYP4F30PQ9H0H9 118 aa1.76□□□□□ -2.13
SND1-216ENST00000492840 GNG13Q9P2W3 67 aa1.76□□□□□ -2.13
SND1-216ENST00000492840 F2Z2F3 143 aa1.75□□□□□ -2.13
SND1-216ENST00000492840 F8VRH5 84 aa1.75□□□□□ -2.13
SND1-216ENST00000492840 K7EP34 96 aa1.75□□□□□ -2.13
SND1-216ENST00000492840 FCER1GP30273 86 aa1.75□□□□□ -2.13
SND1-216ENST00000492840 ATP5EP56381 51 aaPredicted RBP1.75□□□□□ -2.13
SND1-216ENST00000492840 Q8IZM0 81 aa1.75□□□□□ -2.13
SND1-216ENST00000492840 C18orf32Q8TCD1 76 aa1.75□□□□□ -2.13
SND1-216ENST00000492840 TOMM7Q9P0U1 55 aa1.75□□□□□ -2.13
SND1-216ENST00000492840 CTXND1A0A1B0GTU2 59 aa1.74□□□□□ -2.13
SND1-216ENST00000492840 BVES-AS1Q5T3Y7 98 aa1.74□□□□□ -2.13
SND1-216ENST00000492840 PLAC4Q8WY50 150 aa1.74□□□□□ -2.13
SND1-216ENST00000492840 SPCS1Q9Y6A9 102 aa1.74□□□□□ -2.13
SND1-216ENST00000492840 V9GYV3 84 aa1.74□□□□□ -2.13
SND1-216ENST00000492840 LEPROTL1O95214 131 aa1.73□□□□□ -2.13
SND1-216ENST00000492840 POLR2KP53803 58 aaKnown RBP1.73□□□□□ -2.13
SND1-216ENST00000492840 H3BUT2 72 aa1.72□□□□□ -2.13
SND1-216ENST00000492840 ACYP1P07311 99 aa1.72□□□□□ -2.13
SND1-216ENST00000492840 C3orf79P0CE67 100 aa1.72□□□□□ -2.13
SND1-216ENST00000492840 COX8AP10176 69 aa1.72□□□□□ -2.13
SND1-216ENST00000492840 CNFNQ9BYD5 112 aa1.72□□□□□ -2.13
SND1-216ENST00000492840 HIGD1BQ9P298 99 aa1.72□□□□□ -2.13
SND1-216ENST00000492840 ETDCA0A1B0GVM5 59 aa1.71□□□□□ -2.14
SND1-216ENST00000492840 LINC01549A6NIU2 74 aa1.71□□□□□ -2.14
SND1-216ENST00000492840 SYS1-DBNDD2H3BUS1 97 aa1.71□□□□□ -2.14
SND1-216ENST00000492840 MT1BP07438 61 aa1.7□□□□□ -2.14
SND1-216ENST00000492840 COX6CP09669 75 aa1.7□□□□□ -2.14
SND1-216ENST00000492840 Q5VV11 94 aa1.7□□□□□ -2.14
SND1-216ENST00000492840 KRTAP8-1Q8IUC2 63 aa1.7□□□□□ -2.14
SND1-216ENST00000492840 Q96NJ1 140 aa1.7□□□□□ -2.14
SND1-216ENST00000492840 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
SND1-216ENST00000492840 SMIM27A0A1W2PRY6 76 aa1.69□□□□□ -2.14
SND1-216ENST00000492840 SPRR1AP35321 89 aa1.69□□□□□ -2.14
SND1-216ENST00000492840 IFI27P40305 119 aaPredicted RBP1.69□□□□□ -2.14
SND1-216ENST00000492840 RPL39P62891 51 aaKnown RBP1.69□□□□□ -2.14
SND1-216ENST00000492840 PPP1R17O96001 155 aa1.68□□□□□ -2.14
SND1-216ENST00000492840 ETDBQ3ZM63 59 aa1.68□□□□□ -2.14
SND1-216ENST00000492840 MYMXA0A1B0GTQ4 84 aa1.67□□□□□ -2.14
SND1-216ENST00000492840 K7EMI3 77 aa1.67□□□□□ -2.14
SND1-216ENST00000492840 PLNP26678 52 aa1.67□□□□□ -2.14
SND1-216ENST00000492840 ATXN8Q156A1 80 aa1.67□□□□□ -2.14
SND1-216ENST00000492840 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
SND1-216ENST00000492840 NXT2Q9NPJ8 142 aaKnown RBP1.67□□□□□ -2.14
SND1-216ENST00000492840 A0A1B0GUT8 65 aa1.66□□□□□ -2.14
SND1-216ENST00000492840 ATOX1O00244 68 aa1.66□□□□□ -2.14
SND1-216ENST00000492840 TMEM170BQ5T4T1 132 aa1.66□□□□□ -2.14
SND1-216ENST00000492840 KCNQ1DNQ9H478 68 aa1.66□□□□□ -2.14
SND1-216ENST00000492840 NDUFC1O43677 76 aa1.65□□□□□ -2.15
SND1-216ENST00000492840 MT-ATP8P03928 68 aa1.65□□□□□ -2.15
SND1-216ENST00000492840 KRTAP19-8Q3LI54 63 aa1.65□□□□□ -2.15
SND1-216ENST00000492840 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.15
SND1-216ENST00000492840 Q6ZRX8 168 aa1.65□□□□□ -2.15
SND1-216ENST00000492840 LINC00643Q86TS7 51 aa1.65□□□□□ -2.15
SND1-216ENST00000492840 CDKN2A-AS1Q9UH64 79 aa1.65□□□□□ -2.15
SND1-216ENST00000492840 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
SND1-216ENST00000492840 TRBV7-7A0A0K0K1E9 115 aa1.64□□□□□ -2.15
SND1-216ENST00000492840 SPRR1BP22528 89 aa1.64□□□□□ -2.15
SND1-216ENST00000492840 C20orf78Q9BR46 151 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms