RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 IGKV2D-30A0A075B6S6 120 aa4.34□□□□□ -1.71
SNX17-207ENST00000489402 hDV103S1A0JD37 113 aa4.34□□□□□ -1.71
SNX17-207ENST00000489402 IGKV2-30P06310 120 aa4.34□□□□□ -1.71
SNX17-207ENST00000489402 C7orf65Q6ZTY9 151 aa4.34□□□□□ -1.71
SNX17-207ENST00000489402 CXCL6P80162 114 aa4.33□□□□□ -1.72
SNX17-207ENST00000489402 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
SNX17-207ENST00000489402 HIST1H4AP62805 103 aaKnown RBP4.32□□□□□ -1.72
SNX17-207ENST00000489402 K7EQZ3 153 aa4.31□□□□□ -1.72
SNX17-207ENST00000489402 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
SNX17-207ENST00000489402 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
SNX17-207ENST00000489402 A6NN06 94 aa4.29□□□□□ -1.72
SNX17-207ENST00000489402 A0A087WVE0 104 aa4.28□□□□□ -1.72
SNX17-207ENST00000489402 BPY2O14599 106 aa4.27□□□□□ -1.73
SNX17-207ENST00000489402 C4orf26Q17RF5 130 aa4.27□□□□□ -1.73
SNX17-207ENST00000489402 C5orf47Q569G3 176 aa4.26□□□□□ -1.73
SNX17-207ENST00000489402 Q5VV11 94 aa4.26□□□□□ -1.73
SNX17-207ENST00000489402 Q5W150 140 aa4.26□□□□□ -1.73
SNX17-207ENST00000489402 ANAPC13Q9BS18 74 aa4.26□□□□□ -1.73
SNX17-207ENST00000489402 ATOX1O00244 68 aa4.25□□□□□ -1.73
SNX17-207ENST00000489402 MT1BP07438 61 aa4.25□□□□□ -1.73
SNX17-207ENST00000489402 CASC2Q6XLA1 102 aa4.25□□□□□ -1.73
SNX17-207ENST00000489402 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
SNX17-207ENST00000489402 S4R3F8 94 aa4.23□□□□□ -1.73
SNX17-207ENST00000489402 CSAG1Q6PB30 78 aa4.22□□□□□ -1.73
SNX17-207ENST00000489402 Q8N9L7 120 aa4.22□□□□□ -1.73
SNX17-207ENST00000489402 COX7CP15954 63 aa4.2□□□□□ -1.74
SNX17-207ENST00000489402 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
SNX17-207ENST00000489402 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
SNX17-207ENST00000489402 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
SNX17-207ENST00000489402 KMT2DO14686 5537 aa4.19□□□□□ -1.74
SNX17-207ENST00000489402 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
SNX17-207ENST00000489402 CCDC179H3BU77 68 aa4.19□□□□□ -1.74
SNX17-207ENST00000489402 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
SNX17-207ENST00000489402 SMIM20Q8N5G0 67 aa4.19□□□□□ -1.74
SNX17-207ENST00000489402 TRAV7A0A075B6U4 112 aa4.18□□□□□ -1.74
SNX17-207ENST00000489402 UQCRQO14949 82 aa4.18□□□□□ -1.74
SNX17-207ENST00000489402 C1orf64Q8NEQ6 169 aa4.18□□□□□ -1.74
SNX17-207ENST00000489402 LCA10Q71F78 164 aa4.17□□□□□ -1.74
SNX17-207ENST00000489402 OCR1Q9BZK8 76 aa4.17□□□□□ -1.74
SNX17-207ENST00000489402 KLKP1Q107X0 134 aa4.16□□□□□ -1.74
SNX17-207ENST00000489402 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
SNX17-207ENST00000489402 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
SNX17-207ENST00000489402 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
SNX17-207ENST00000489402 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
SNX17-207ENST00000489402 CRIPTQ9P021 101 aa4.11□□□□□ -1.75
SNX17-207ENST00000489402 TP53AIP1Q9HCN2 124 aa4.1□□□□□ -1.75
SNX17-207ENST00000489402 C20orf197Q8N268 126 aa4.09□□□□□ -1.75
SNX17-207ENST00000489402 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
SNX17-207ENST00000489402 H7BZZ5 65 aa4.05□□□□□ -1.76
SNX17-207ENST00000489402 H3BPC8 53 aa4.04□□□□□ -1.76
SNX17-207ENST00000489402 NDUFC1O43677 76 aa4.04□□□□□ -1.76
SNX17-207ENST00000489402 TMEM258P61165 79 aa4.04□□□□□ -1.76
SNX17-207ENST00000489402 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
SNX17-207ENST00000489402 MP68P56378 58 aa4.02□□□□□ -1.77
SNX17-207ENST00000489402 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
SNX17-207ENST00000489402 TRAV22A0A0B4J277 110 aa4.01□□□□□ -1.77
SNX17-207ENST00000489402 H0Y9P7 68 aa4.01□□□□□ -1.77
SNX17-207ENST00000489402 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
SNX17-207ENST00000489402 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
SNX17-207ENST00000489402 SPRR2EP22531 72 aa4□□□□□ -1.77
SNX17-207ENST00000489402 SPRR2BP35325 72 aa4□□□□□ -1.77
SNX17-207ENST00000489402 SPRR2AP35326 72 aa4□□□□□ -1.77
SNX17-207ENST00000489402 LOC101927531A0A1B0GV80 90 aa3.99□□□□□ -1.77
SNX17-207ENST00000489402 H0YAA0 97 aa3.99□□□□□ -1.77
SNX17-207ENST00000489402 LINC00208Q96KT6 92 aa3.99□□□□□ -1.77
SNX17-207ENST00000489402 A8MUN3 132 aa3.97□□□□□ -1.77
SNX17-207ENST00000489402 ATP5EP56381 51 aaPredicted RBP3.97□□□□□ -1.77
SNX17-207ENST00000489402 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
SNX17-207ENST00000489402 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
SNX17-207ENST00000489402 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
SNX17-207ENST00000489402 ADM2Q7Z4H4 148 aa3.94□□□□□ -1.78
SNX17-207ENST00000489402 KRTAP8-1Q8IUC2 63 aa3.94□□□□□ -1.78
SNX17-207ENST00000489402 SPANXA2-OT1Q8N9U9 137 aa3.94□□□□□ -1.78
SNX17-207ENST00000489402 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
SNX17-207ENST00000489402 MT1XP80297 61 aa3.92□□□□□ -1.78
SNX17-207ENST00000489402 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
SNX17-207ENST00000489402 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
SNX17-207ENST00000489402 SERP1Q9Y6X1 66 aa3.92□□□□□ -1.78
SNX17-207ENST00000489402 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
SNX17-207ENST00000489402 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
SNX17-207ENST00000489402 R4GN34 69 aa3.88□□□□□ -1.79
SNX17-207ENST00000489402 SPRR2DP22532 72 aa3.87□□□□□ -1.79
SNX17-207ENST00000489402 M0QZ58 72 aa3.83□□□□□ -1.8
SNX17-207ENST00000489402 SMIM26A0A096LP01 95 aa3.82□□□□□ -1.8
SNX17-207ENST00000489402 P0C880 135 aa3.81□□□□□ -1.8
SNX17-207ENST00000489402 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
SNX17-207ENST00000489402 LINC01554Q52M75 96 aa3.79□□□□□ -1.8
SNX17-207ENST00000489402 COA5Q86WW8 74 aa3.79□□□□□ -1.8
SNX17-207ENST00000489402 ACYP2P14621 99 aa3.78□□□□□ -1.8
SNX17-207ENST00000489402 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
SNX17-207ENST00000489402 Q1T7F1 81 aa3.75□□□□□ -1.81
SNX17-207ENST00000489402 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
SNX17-207ENST00000489402 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
SNX17-207ENST00000489402 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
SNX17-207ENST00000489402 V9GYY9 64 aa3.71□□□□□ -1.82
SNX17-207ENST00000489402 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
SNX17-207ENST00000489402 LINC01558Q9Y6Z2 57 aa3.69□□□□□ -1.82
SNX17-207ENST00000489402 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
SNX17-207ENST00000489402 SPTSSBQ8NFR3 76 aa3.63□□□□□ -1.83
SNX17-207ENST00000489402 PSPHP1O15172 72 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms