RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 HIST1H2BKO60814 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST1H2BJP06899 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 COX6CP09669 75 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST1H2BOP23527 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST1H2BBP33778 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST1H2BDP58876 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST1H2BCP62807 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST2H2BEQ16778 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST1H2BHQ93079 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST1H2BNQ99877 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 HIST1H2BMQ99879 126 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 MRPL34Q9BQ48 92 aaKnown RBP1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 H3BMG7 143 aa1.21□□□□□ -2.22
DEPDC1-203ENST00000488146 A8MUN3 132 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 APOC3P02656 99 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 Q6ZQT0 140 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 TP53AIP1Q9HCN2 124 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 PRO1854Q9UHT4 67 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 K7ERS5 55 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 DNAL4O96015 105 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 CSAG1Q6PB30 78 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 C20orf197Q8N268 126 aa1.2□□□□□ -2.22
DEPDC1-203ENST00000488146 NPC2P61916 151 aa1.19□□□□□ -2.22
DEPDC1-203ENST00000488146 KRTAP25-1Q3LHN0 102 aa1.19□□□□□ -2.22
DEPDC1-203ENST00000488146 LYRM7Q5U5X0 104 aa1.19□□□□□ -2.22
DEPDC1-203ENST00000488146 MMP24-AS1A0A0U1RRL7 71 aa1.19□□□□□ -2.22
DEPDC1-203ENST00000488146 RBM3P98179 157 aaKnown RBP1.19□□□□□ -2.22
DEPDC1-203ENST00000488146 HSD52Q0P140 79 aa1.19□□□□□ -2.22
DEPDC1-203ENST00000488146 TTTY13Q9BZ97 58 aa1.19□□□□□ -2.22
DEPDC1-203ENST00000488146 SPANXA2-OT1Q8N9U9 137 aa1.18□□□□□ -2.22
DEPDC1-203ENST00000488146 C9JAW5 83 aa1.18□□□□□ -2.22
DEPDC1-203ENST00000488146 H3BUT2 72 aa1.18□□□□□ -2.22
DEPDC1-203ENST00000488146 CCKP06307 115 aa1.18□□□□□ -2.22
DEPDC1-203ENST00000488146 VAMP8Q9BV40 100 aa1.18□□□□□ -2.22
DEPDC1-203ENST00000488146 PRO0461Q9UI25 63 aa1.18□□□□□ -2.22
DEPDC1-203ENST00000488146 S4R3F8 94 aa1.18□□□□□ -2.22
DEPDC1-203ENST00000488146 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
DEPDC1-203ENST00000488146 R4GN34 69 aa1.17□□□□□ -2.22
DEPDC1-203ENST00000488146 MACF1Q9UPN3 7388 aaKnown RBP1.17□□□□□ -2.22
DEPDC1-203ENST00000488146 SPRR2EP22531 72 aa1.16□□□□□ -2.22
DEPDC1-203ENST00000488146 SPRR2BP35325 72 aa1.16□□□□□ -2.22
DEPDC1-203ENST00000488146 SPRR2AP35326 72 aa1.16□□□□□ -2.22
DEPDC1-203ENST00000488146 hDV103S1A0JD37 113 aa1.16□□□□□ -2.22
DEPDC1-203ENST00000488146 H3BT86 120 aa1.15□□□□□ -2.22
DEPDC1-203ENST00000488146 ATXN8Q156A1 80 aa1.15□□□□□ -2.22
DEPDC1-203ENST00000488146 FABP2P12104 132 aa1.15□□□□□ -2.23
DEPDC1-203ENST00000488146 C1orf64Q8NEQ6 169 aa1.15□□□□□ -2.23
DEPDC1-203ENST00000488146 LOC101927531A0A1B0GV80 90 aa1.14□□□□□ -2.23
DEPDC1-203ENST00000488146 SPRR2DP22532 72 aa1.14□□□□□ -2.23
DEPDC1-203ENST00000488146 PMAIP1Q13794 54 aa1.14□□□□□ -2.23
DEPDC1-203ENST00000488146 ATOX1O00244 68 aa1.13□□□□□ -2.23
DEPDC1-203ENST00000488146 LCE3DQ9BYE3 92 aa1.13□□□□□ -2.23
DEPDC1-203ENST00000488146 HCG22E2RYF7 251 aa1.13□□□□□ -2.23
DEPDC1-203ENST00000488146 NREPQ16612 68 aa1.13□□□□□ -2.23
DEPDC1-203ENST00000488146 SPINT4Q6UDR6 99 aa1.13□□□□□ -2.23
DEPDC1-203ENST00000488146 KRTAP8-1Q8IUC2 63 aa1.13□□□□□ -2.23
DEPDC1-203ENST00000488146 M0R143 59 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 MT1XP80297 61 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 ATOH7Q8N100 152 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 FSIP2Q5CZC0 6907 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 H3BPC8 53 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 BAALC-AS2P0C853 105 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 PLAC4Q8WY50 150 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 FAM236AA0A1B0GUQ0 79 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 FAM236BA0A1B0GV22 79 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 KMT2DO14686 5537 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 S100A1P23297 94 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 CASC2Q6XLA1 102 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 UQCR10Q9UDW1 63 aa1.12□□□□□ -2.23
DEPDC1-203ENST00000488146 TRAV22A0A0B4J277 110 aa1.11□□□□□ -2.23
DEPDC1-203ENST00000488146 SPATA45Q537H7 98 aa1.11□□□□□ -2.23
DEPDC1-203ENST00000488146 ATP5EP2Q5VTU8 51 aa1.11□□□□□ -2.23
DEPDC1-203ENST00000488146 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
DEPDC1-203ENST00000488146 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
DEPDC1-203ENST00000488146 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
DEPDC1-203ENST00000488146 LCA10Q71F78 164 aa1.11□□□□□ -2.23
DEPDC1-203ENST00000488146 UQCRQO14949 82 aa1.1□□□□□ -2.23
DEPDC1-203ENST00000488146 NDUFC1O43677 76 aa1.1□□□□□ -2.23
DEPDC1-203ENST00000488146 FXYD2P54710 66 aa1.1□□□□□ -2.23
DEPDC1-203ENST00000488146 CYSTM1Q9H1C7 97 aa1.09□□□□□ -2.23
DEPDC1-203ENST00000488146 A0A1B0GU33 70 aa1.08□□□□□ -2.24
DEPDC1-203ENST00000488146 SMIM20Q8N5G0 67 aa1.08□□□□□ -2.24
DEPDC1-203ENST00000488146 CYP4F30PQ9H0H9 118 aa1.08□□□□□ -2.24
DEPDC1-203ENST00000488146 M0QZ58 72 aa1.08□□□□□ -2.24
DEPDC1-203ENST00000488146 SPTSSBQ8NFR3 76 aa1.08□□□□□ -2.24
DEPDC1-203ENST00000488146 SPRR5A0A1B0GTR4 108 aa1.07□□□□□ -2.24
DEPDC1-203ENST00000488146 ACYP1P07311 99 aa1.07□□□□□ -2.24
DEPDC1-203ENST00000488146 UBL5Q9BZL1 73 aa1.07□□□□□ -2.24
DEPDC1-203ENST00000488146 BATFQ16520 125 aa1.07□□□□□ -2.24
DEPDC1-203ENST00000488146 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
DEPDC1-203ENST00000488146 TRAV7A0A075B6U4 112 aa1.06□□□□□ -2.24
DEPDC1-203ENST00000488146 TAX1BP3O14907 124 aa1.06□□□□□ -2.24
DEPDC1-203ENST00000488146 LCE3AQ5TA76 89 aa1.06□□□□□ -2.24
DEPDC1-203ENST00000488146 C10orf95Q9H7T3 257 aa1.06□□□□□ -2.24
DEPDC1-203ENST00000488146 MUC12Q9UKN1 5478 aa1.06□□□□□ -2.24
DEPDC1-203ENST00000488146 PP632Q6XCG6 107 aa1.06□□□□□ -2.24
DEPDC1-203ENST00000488146 MT1GP13640 62 aa1.05□□□□□ -2.24
DEPDC1-203ENST00000488146 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms