RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 MMP24-AS1A0A0U1RRL7 71 aa5.99□□□□□ -1.45
SREBF1-215ENST00000487401 NDUFS5O43920 106 aa5.99□□□□□ -1.45
SREBF1-215ENST00000487401 hDV103S1A0JD37 113 aa5.98□□□□□ -1.45
SREBF1-215ENST00000487401 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.46
SREBF1-215ENST00000487401 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
SREBF1-215ENST00000487401 CASC2Q6XLA1 102 aa5.94□□□□□ -1.46
SREBF1-215ENST00000487401 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
SREBF1-215ENST00000487401 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
SREBF1-215ENST00000487401 H3BPC8 53 aa5.92□□□□□ -1.46
SREBF1-215ENST00000487401 MP68P56378 58 aa5.92□□□□□ -1.46
SREBF1-215ENST00000487401 MACF1Q9UPN3 7388 aaKnown RBP5.89□□□□□ -1.47
SREBF1-215ENST00000487401 C4orf26Q17RF5 130 aa5.89□□□□□ -1.47
SREBF1-215ENST00000487401 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
SREBF1-215ENST00000487401 C7orf65Q6ZTY9 151 aa5.89□□□□□ -1.47
SREBF1-215ENST00000487401 Q5W150 140 aa5.88□□□□□ -1.47
SREBF1-215ENST00000487401 CYP4F30PQ9H0H9 118 aa5.88□□□□□ -1.47
SREBF1-215ENST00000487401 H0Y9P7 68 aa5.87□□□□□ -1.47
SREBF1-215ENST00000487401 TRAV22A0A0B4J277 110 aa5.86□□□□□ -1.47
SREBF1-215ENST00000487401 SYNE2Q8WXH0 6885 aaKnown RBP5.85□□□□□ -1.47
SREBF1-215ENST00000487401 LINC00208Q96KT6 92 aa5.85□□□□□ -1.47
SREBF1-215ENST00000487401 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.47
SREBF1-215ENST00000487401 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
SREBF1-215ENST00000487401 C1orf64Q8NEQ6 169 aa5.81□□□□□ -1.48
SREBF1-215ENST00000487401 Q1T7F1 81 aa5.75□□□□□ -1.49
SREBF1-215ENST00000487401 S4R3F8 94 aa5.72□□□□□ -1.49
SREBF1-215ENST00000487401 CSAG1Q6PB30 78 aa5.71□□□□□ -1.5
SREBF1-215ENST00000487401 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
SREBF1-215ENST00000487401 V9GYY9 64 aa5.7□□□□□ -1.5
SREBF1-215ENST00000487401 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
SREBF1-215ENST00000487401 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
SREBF1-215ENST00000487401 PRO0628Q9UI54 55 aa5.68□□□□□ -1.5
SREBF1-215ENST00000487401 LCA10Q71F78 164 aa5.65□□□□□ -1.5
SREBF1-215ENST00000487401 COA5Q86WW8 74 aa5.65□□□□□ -1.5
SREBF1-215ENST00000487401 Q5VV11 94 aa5.63□□□□□ -1.51
SREBF1-215ENST00000487401 A6NN06 94 aa5.62□□□□□ -1.51
SREBF1-215ENST00000487401 BRK1Q8WUW1 75 aa5.6□□□□□ -1.51
SREBF1-215ENST00000487401 MT1BP07438 61 aa5.59□□□□□ -1.51
SREBF1-215ENST00000487401 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
SREBF1-215ENST00000487401 A8MUN3 132 aa5.58□□□□□ -1.52
SREBF1-215ENST00000487401 PSPHP1O15172 72 aa5.58□□□□□ -1.52
SREBF1-215ENST00000487401 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
SREBF1-215ENST00000487401 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
SREBF1-215ENST00000487401 NEBP20929 6669 aa5.54□□□□□ -1.52
SREBF1-215ENST00000487401 PRR15LQ9BU68 103 aa5.54□□□□□ -1.52
SREBF1-215ENST00000487401 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
SREBF1-215ENST00000487401 ACYP2P14621 99 aa5.53□□□□□ -1.52
SREBF1-215ENST00000487401 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
SREBF1-215ENST00000487401 CRIPTQ9P021 101 aa5.51□□□□□ -1.53
SREBF1-215ENST00000487401 CHKB-CPT1BH3BT56 60 aa5.5□□□□□ -1.53
SREBF1-215ENST00000487401 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
SREBF1-215ENST00000487401 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
SREBF1-215ENST00000487401 A6NED7 52 aa5.42□□□□□ -1.54
SREBF1-215ENST00000487401 H0YAA0 97 aa5.4□□□□□ -1.54
SREBF1-215ENST00000487401 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
SREBF1-215ENST00000487401 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
SREBF1-215ENST00000487401 A8MU10 97 aa5.37□□□□□ -1.55
SREBF1-215ENST00000487401 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
SREBF1-215ENST00000487401 KMT2DO14686 5537 aa5.35□□□□□ -1.55
SREBF1-215ENST00000487401 KRTAP5-9P26371 169 aa5.34□□□□□ -1.55
SREBF1-215ENST00000487401 A0A1B0GU69 56 aa5.32□□□□□ -1.56
SREBF1-215ENST00000487401 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
SREBF1-215ENST00000487401 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
SREBF1-215ENST00000487401 KRTAP3-2Q9BYR7 98 aa5.31□□□□□ -1.56
SREBF1-215ENST00000487401 SPTSSBQ8NFR3 76 aa5.3□□□□□ -1.56
SREBF1-215ENST00000487401 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
SREBF1-215ENST00000487401 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
SREBF1-215ENST00000487401 SPATA8Q6RVD6 105 aa5.26□□□□□ -1.57
SREBF1-215ENST00000487401 R4GN34 69 aa5.25□□□□□ -1.57
SREBF1-215ENST00000487401 UQCR11O14957 56 aa5.23□□□□□ -1.57
SREBF1-215ENST00000487401 MT1XP80297 61 aa5.22□□□□□ -1.57
SREBF1-215ENST00000487401 M0QZ58 72 aa5.2□□□□□ -1.58
SREBF1-215ENST00000487401 P0C880 135 aa5.2□□□□□ -1.58
SREBF1-215ENST00000487401 SEC61GP60059 68 aa5.2□□□□□ -1.58
SREBF1-215ENST00000487401 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
SREBF1-215ENST00000487401 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
SREBF1-215ENST00000487401 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
SREBF1-215ENST00000487401 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
SREBF1-215ENST00000487401 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
SREBF1-215ENST00000487401 SPRR2EP22531 72 aa5.15□□□□□ -1.59
SREBF1-215ENST00000487401 SPRR2BP35325 72 aa5.15□□□□□ -1.59
SREBF1-215ENST00000487401 SPRR2AP35326 72 aa5.15□□□□□ -1.59
SREBF1-215ENST00000487401 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
SREBF1-215ENST00000487401 LINC01554Q52M75 96 aa5.14□□□□□ -1.59
SREBF1-215ENST00000487401 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
SREBF1-215ENST00000487401 A0A1B0GU33 70 aa5.08□□□□□ -1.6
SREBF1-215ENST00000487401 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
SREBF1-215ENST00000487401 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
SREBF1-215ENST00000487401 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
SREBF1-215ENST00000487401 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
SREBF1-215ENST00000487401 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
SREBF1-215ENST00000487401 SPRR2DP22532 72 aa4.98□□□□□ -1.61
SREBF1-215ENST00000487401 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
SREBF1-215ENST00000487401 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
SREBF1-215ENST00000487401 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
SREBF1-215ENST00000487401 K7ERS5 55 aa4.9□□□□□ -1.63
SREBF1-215ENST00000487401 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
SREBF1-215ENST00000487401 KRTAP13-4Q3LI77 160 aa4.84□□□□□ -1.63
SREBF1-215ENST00000487401 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
SREBF1-215ENST00000487401 H3BS24 57 aa4.8□□□□□ -1.64
SREBF1-215ENST00000487401 A0A0D9SG42 100 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms