RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 DEFB131BA0A096LNP1 70 aa3.07□□□□□ -1.92
SF1-217ENST00000486960 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
SF1-217ENST00000486960 ZCCHC13Q8WW36 166 aaKnown RBP3.07□□□□□ -1.92
SF1-217ENST00000486960 PRO0255Q9UI72 69 aa3.07□□□□□ -1.92
SF1-217ENST00000486960 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
SF1-217ENST00000486960 IGLV4-60A0A075B6I1 120 aa3.06□□□□□ -1.92
SF1-217ENST00000486960 I3L3M4 83 aa3.06□□□□□ -1.92
SF1-217ENST00000486960 RPL39P62891 51 aaKnown RBP3.06□□□□□ -1.92
SF1-217ENST00000486960 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.05□□□□□ -1.92
SF1-217ENST00000486960 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
SF1-217ENST00000486960 LOC110117498A0A087WWA1 95 aa3.04□□□□□ -1.92
SF1-217ENST00000486960 H3BNG1 76 aa3.04□□□□□ -1.92
SF1-217ENST00000486960 IGKV4-1P06312 121 aa3.03□□□□□ -1.92
SF1-217ENST00000486960 WFDC10BQ8IUB3 73 aa3.03□□□□□ -1.92
SF1-217ENST00000486960 Q8N9L7 120 aa3.03□□□□□ -1.92
SF1-217ENST00000486960 LINC00304Q8N9R0 145 aa3.03□□□□□ -1.92
SF1-217ENST00000486960 Q96NJ1 140 aa3.03□□□□□ -1.92
SF1-217ENST00000486960 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
SF1-217ENST00000486960 ZNF625Q96I27 306 aaPredicted RBP3.02□□□□□ -1.93
SF1-217ENST00000486960 INE1O15225 51 aa3.01□□□□□ -1.93
SF1-217ENST00000486960 IGLV6-57P01721 117 aa3.01□□□□□ -1.93
SF1-217ENST00000486960 ACYP2P14621 99 aa3.01□□□□□ -1.93
SF1-217ENST00000486960 LINC00472Q9H8W2 130 aa3.01□□□□□ -1.93
SF1-217ENST00000486960 COX6A2Q02221 97 aa3□□□□□ -1.93
SF1-217ENST00000486960 CLPSL2Q6UWE3 100 aa3□□□□□ -1.93
SF1-217ENST00000486960 KRTAP11-1Q8IUC1 163 aa3□□□□□ -1.93
SF1-217ENST00000486960 KRTAP1-5Q9BYS1 174 aa3□□□□□ -1.93
SF1-217ENST00000486960 A0A1B0GU69 56 aa2.98□□□□□ -1.93
SF1-217ENST00000486960 LINC00959A0A1B0GUT2 108 aa2.98□□□□□ -1.93
SF1-217ENST00000486960 ANGP03950 147 aaKnown RBP2.98□□□□□ -1.93
SF1-217ENST00000486960 LINC01556Q5JQF7 62 aa2.98□□□□□ -1.93
SF1-217ENST00000486960 COA5Q86WW8 74 aa2.98□□□□□ -1.93
SF1-217ENST00000486960 NDUFA1O15239 70 aa2.97□□□□□ -1.93
SF1-217ENST00000486960 UBE2DNLQ8IWF7 75 aa2.96□□□□□ -1.94
SF1-217ENST00000486960 LINC00308Q8TCZ7 52 aa2.96□□□□□ -1.94
SF1-217ENST00000486960 CDKN2A-AS1Q9UH64 79 aa2.96□□□□□ -1.94
SF1-217ENST00000486960 COX7BP24311 80 aa2.95□□□□□ -1.94
SF1-217ENST00000486960 KMT2DO14686 5537 aa2.95□□□□□ -1.94
SF1-217ENST00000486960 NCR3O14931 201 aa2.94□□□□□ -1.94
SF1-217ENST00000486960 DSCR10P59022 87 aa2.94□□□□□ -1.94
SF1-217ENST00000486960 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
SF1-217ENST00000486960 Q6ZQY7 126 aa2.94□□□□□ -1.94
SF1-217ENST00000486960 Q6ZRN7 208 aaPredicted RBP2.94□□□□□ -1.94
SF1-217ENST00000486960 IGKV2-28A0A075B6P5 120 aa2.93□□□□□ -1.94
SF1-217ENST00000486960 H0YGX0 51 aa2.93□□□□□ -1.94
SF1-217ENST00000486960 IGKV2D-28P01615 120 aa2.93□□□□□ -1.94
SF1-217ENST00000486960 ETDCA0A1B0GVM5 59 aa2.92□□□□□ -1.94
SF1-217ENST00000486960 KCNQ1DNQ9H478 68 aa2.92□□□□□ -1.94
SF1-217ENST00000486960 IGKV2-24A0A0C4DH68 120 aa2.91□□□□□ -1.94
SF1-217ENST00000486960 UNQ6190/PRO20217Q6UXQ8 127 aa2.9□□□□□ -1.95
SF1-217ENST00000486960 TOMM7Q9P0U1 55 aa2.9□□□□□ -1.95
SF1-217ENST00000486960 GVQW2A0A096LPI5 108 aaPredicted RBP2.89□□□□□ -1.95
SF1-217ENST00000486960 Q8IZM0 81 aa2.89□□□□□ -1.95
SF1-217ENST00000486960 C6orf48Q9UBA6 75 aa2.89□□□□□ -1.95
SF1-217ENST00000486960 SMIM11BQ8TCY0 68 aa2.88□□□□□ -1.95
SF1-217ENST00000486960 ANAPC11Q9NYG5 84 aa2.87□□□□□ -1.95
SF1-217ENST00000486960 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
SF1-217ENST00000486960 Q6ZRX8 168 aa2.86□□□□□ -1.95
SF1-217ENST00000486960 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
SF1-217ENST00000486960 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
SF1-217ENST00000486960 Q6ZSA8 131 aa2.85□□□□□ -1.95
SF1-217ENST00000486960 LINC00158P58513 81 aa2.84□□□□□ -1.95
SF1-217ENST00000486960 PLAC4Q8WY50 150 aa2.84□□□□□ -1.95
SF1-217ENST00000486960 A0A096LNI7 61 aa2.83□□□□□ -1.96
SF1-217ENST00000486960 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
SF1-217ENST00000486960 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
SF1-217ENST00000486960 LINC00575Q6W349 94 aa2.81□□□□□ -1.96
SF1-217ENST00000486960 KRTAP10-6P60371 365 aaPredicted RBP2.8□□□□□ -1.96
SF1-217ENST00000486960 KRTAP10-8P60410 259 aa2.8□□□□□ -1.96
SF1-217ENST00000486960 KRTAP1-4P0C5Y4 121 aa2.76□□□□□ -1.97
SF1-217ENST00000486960 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
SF1-217ENST00000486960 MT1HP80294 61 aa2.76□□□□□ -1.97
SF1-217ENST00000486960 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
SF1-217ENST00000486960 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
SF1-217ENST00000486960 MT3P25713 68 aa2.75□□□□□ -1.97
SF1-217ENST00000486960 KRTAP4-1Q9BYQ7 146 aa2.75□□□□□ -1.97
SF1-217ENST00000486960 SPRR1AP35321 89 aa2.74□□□□□ -1.97
SF1-217ENST00000486960 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
SF1-217ENST00000486960 PRLHP81277 87 aa2.72□□□□□ -1.97
SF1-217ENST00000486960 KRTAP19-2Q3LHN2 52 aa2.72□□□□□ -1.97
SF1-217ENST00000486960 KRTAP13-1Q8IUC0 172 aa2.72□□□□□ -1.97
SF1-217ENST00000486960 IGLV5-48A0A075B6I7 105 aa2.71□□□□□ -1.98
SF1-217ENST00000486960 CRIPTQ9P021 101 aa2.69□□□□□ -1.98
SF1-217ENST00000486960 RPL37P61927 97 aaKnown RBP2.67□□□□□ -1.98
SF1-217ENST00000486960 DEFB105AQ8NG35 78 aa2.66□□□□□ -1.98
SF1-217ENST00000486960 SPRR1BP22528 89 aa2.64□□□□□ -1.99
SF1-217ENST00000486960 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
SF1-217ENST00000486960 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
SF1-217ENST00000486960 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
SF1-217ENST00000486960 LCE1AQ5T7P2 110 aa2.62□□□□□ -1.99
SF1-217ENST00000486960 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
SF1-217ENST00000486960 COX6B2Q6YFQ2 88 aa2.62□□□□□ -1.99
SF1-217ENST00000486960 K7EQZ3 153 aa2.6□□□□□ -1.99
SF1-217ENST00000486960 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
SF1-217ENST00000486960 MRPL34Q9BQ48 92 aaKnown RBP2.59□□□□□ -1.99
SF1-217ENST00000486960 TP53AIP1Q9HCN2 124 aa2.59□□□□□ -1.99
SF1-217ENST00000486960 KRTAP13-4Q3LI77 160 aa2.57□□□□□ -2
SF1-217ENST00000486960 KRTAP5-9P26371 169 aa2.53□□□□□ -2
SF1-217ENST00000486960 HMCN1Q96RW7 5635 aa2.53□□□□□ -2.01
SF1-217ENST00000486960 MMP24-AS1A0A0U1RRL7 71 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms