RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ORMDL1Q9P0S3 153 aa3.13□□□□□ -1.91
XRN1-212ENST00000486211 CYSTM1Q9H1C7 97 aa3.12□□□□□ -1.91
XRN1-212ENST00000486211 hDV103S1A0JD37 113 aa3.11□□□□□ -1.91
XRN1-212ENST00000486211 H3BQ85 93 aa3.11□□□□□ -1.91
XRN1-212ENST00000486211 TMEM256-PLSCR3K7ERE1 68 aa3.11□□□□□ -1.91
XRN1-212ENST00000486211 PDE6GP18545 87 aa3.11□□□□□ -1.91
XRN1-212ENST00000486211 NDUFA5Q16718 116 aa3.11□□□□□ -1.91
XRN1-212ENST00000486211 H0YAA0 97 aa3.1□□□□□ -1.91
XRN1-212ENST00000486211 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
XRN1-212ENST00000486211 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
XRN1-212ENST00000486211 A0A087WVE0 104 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 A0A0B4J2C4 111 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BKO60814 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 MT1EP04732 61 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BJP06899 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BOP23527 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BBP33778 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BDP58876 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BCP62807 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST2H2BEQ16778 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BHQ93079 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BNQ99877 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 HIST1H2BMQ99879 126 aa3.09□□□□□ -1.91
XRN1-212ENST00000486211 DNAL4O96015 105 aa3.08□□□□□ -1.92
XRN1-212ENST00000486211 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
XRN1-212ENST00000486211 CEND1Q8N111 149 aa3.05□□□□□ -1.92
XRN1-212ENST00000486211 C9JAW5 83 aa3.04□□□□□ -1.92
XRN1-212ENST00000486211 ADM2Q7Z4H4 148 aa3.04□□□□□ -1.92
XRN1-212ENST00000486211 V9GYY9 64 aa3.04□□□□□ -1.92
XRN1-212ENST00000486211 HCG22E2RYF7 251 aa3.01□□□□□ -1.93
XRN1-212ENST00000486211 MT1GP13640 62 aa3.01□□□□□ -1.93
XRN1-212ENST00000486211 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
XRN1-212ENST00000486211 COA6Q5JTJ3 125 aaKnown RBP3.01□□□□□ -1.93
XRN1-212ENST00000486211 PRO1854Q9UHT4 67 aa3.01□□□□□ -1.93
XRN1-212ENST00000486211 A0A1B0GW54 56 aa3□□□□□ -1.93
XRN1-212ENST00000486211 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
XRN1-212ENST00000486211 R4GN34 69 aa2.98□□□□□ -1.93
XRN1-212ENST00000486211 A8MU10 97 aa2.97□□□□□ -1.93
XRN1-212ENST00000486211 MT1MQ8N339 61 aa2.97□□□□□ -1.93
XRN1-212ENST00000486211 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
XRN1-212ENST00000486211 COX8AP10176 69 aa2.96□□□□□ -1.94
XRN1-212ENST00000486211 NREPQ16612 68 aa2.96□□□□□ -1.94
XRN1-212ENST00000486211 LOC110117498A0A087WWA1 95 aa2.95□□□□□ -1.94
XRN1-212ENST00000486211 DLEU1O43261 78 aa2.95□□□□□ -1.94
XRN1-212ENST00000486211 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
XRN1-212ENST00000486211 CASC2Q6XLA1 102 aa2.95□□□□□ -1.94
XRN1-212ENST00000486211 HIST3H2BBQ8N257 126 aa2.95□□□□□ -1.94
XRN1-212ENST00000486211 M0QZ58 72 aa2.94□□□□□ -1.94
XRN1-212ENST00000486211 NDUFC1O43677 76 aa2.93□□□□□ -1.94
XRN1-212ENST00000486211 P0C880 135 aa2.93□□□□□ -1.94
XRN1-212ENST00000486211 FXYD2P54710 66 aa2.93□□□□□ -1.94
XRN1-212ENST00000486211 HIGD1BQ9P298 99 aa2.93□□□□□ -1.94
XRN1-212ENST00000486211 PSMB2P49721 201 aa2.92□□□□□ -1.94
XRN1-212ENST00000486211 LINC01554Q52M75 96 aa2.92□□□□□ -1.94
XRN1-212ENST00000486211 BAALC-AS2P0C853 105 aa2.91□□□□□ -1.94
XRN1-212ENST00000486211 COX6CP09669 75 aa2.9□□□□□ -1.95
XRN1-212ENST00000486211 CAMK2N1Q7Z7J9 78 aa2.9□□□□□ -1.95
XRN1-212ENST00000486211 Q8N9L7 120 aa2.9□□□□□ -1.95
XRN1-212ENST00000486211 SMIM26A0A096LP01 95 aa2.89□□□□□ -1.95
XRN1-212ENST00000486211 FAM240AA0A1B0GVK7 77 aa2.89□□□□□ -1.95
XRN1-212ENST00000486211 K7ERJ3 54 aa2.88□□□□□ -1.95
XRN1-212ENST00000486211 C14orf144Q96I85 54 aa2.88□□□□□ -1.95
XRN1-212ENST00000486211 HIST1H2BLQ99880 126 aa2.88□□□□□ -1.95
XRN1-212ENST00000486211 JMJD7-PLA2G4BH0Y9G9 81 aa2.87□□□□□ -1.95
XRN1-212ENST00000486211 S100A6P06703 90 aa2.87□□□□□ -1.95
XRN1-212ENST00000486211 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
XRN1-212ENST00000486211 C14orf132Q9NPU4 83 aa2.87□□□□□ -1.95
XRN1-212ENST00000486211 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
XRN1-212ENST00000486211 BPY2O14599 106 aa2.86□□□□□ -1.95
XRN1-212ENST00000486211 MT1LQ93083 61 aa2.86□□□□□ -1.95
XRN1-212ENST00000486211 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
XRN1-212ENST00000486211 CYP4F30PQ9H0H9 118 aa2.85□□□□□ -1.95
XRN1-212ENST00000486211 K7EP34 96 aa2.84□□□□□ -1.95
XRN1-212ENST00000486211 PSPHP1O15172 72 aa2.84□□□□□ -1.95
XRN1-212ENST00000486211 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
XRN1-212ENST00000486211 C20orf197Q8N268 126 aa2.83□□□□□ -1.96
XRN1-212ENST00000486211 PRO0461Q9UI25 63 aa2.81□□□□□ -1.96
XRN1-212ENST00000486211 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
XRN1-212ENST00000486211 SCGB1C2P0DMR2 95 aa2.79□□□□□ -1.96
XRN1-212ENST00000486211 NAA38Q9BRA0 125 aaKnown RBP2.78□□□□□ -1.96
XRN1-212ENST00000486211 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
XRN1-212ENST00000486211 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
XRN1-212ENST00000486211 TP53AIP1Q9HCN2 124 aa2.77□□□□□ -1.97
XRN1-212ENST00000486211 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
XRN1-212ENST00000486211 S100A2P29034 98 aa2.76□□□□□ -1.97
XRN1-212ENST00000486211 BATFQ16520 125 aa2.76□□□□□ -1.97
XRN1-212ENST00000486211 SPATA45Q537H7 98 aa2.76□□□□□ -1.97
XRN1-212ENST00000486211 ATXN8Q156A1 80 aa2.75□□□□□ -1.97
XRN1-212ENST00000486211 A0A1W2PPM0 123 aa2.74□□□□□ -1.97
XRN1-212ENST00000486211 HSD52Q0P140 79 aa2.74□□□□□ -1.97
XRN1-212ENST00000486211 ACYP1P07311 99 aa2.73□□□□□ -1.97
XRN1-212ENST00000486211 VAMP8Q9BV40 100 aa2.73□□□□□ -1.97
XRN1-212ENST00000486211 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
XRN1-212ENST00000486211 TRAV22A0A0B4J277 110 aa2.71□□□□□ -1.98
XRN1-212ENST00000486211 LOC101927531A0A1B0GV80 90 aa2.71□□□□□ -1.98
XRN1-212ENST00000486211 MT-ATP8P03928 68 aa2.71□□□□□ -1.98
XRN1-212ENST00000486211 A0A0D9SG42 100 aa2.7□□□□□ -1.98
XRN1-212ENST00000486211 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
XRN1-212ENST00000486211 ANAPC13Q9BS18 74 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms