RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 DEFB136Q30KP8 78 aa1.29□□□□□ -2.2
HMGN4-202ENST00000477243 LINC01549A6NIU2 74 aa1.28□□□□□ -2.2
HMGN4-202ENST00000477243 MT1HL1P0DM35 61 aa1.28□□□□□ -2.2
HMGN4-202ENST00000477243 NCBP2-AS2Q69YL0 99 aa1.28□□□□□ -2.2
HMGN4-202ENST00000477243 UBE2DNLQ8IWF7 75 aa1.28□□□□□ -2.2
HMGN4-202ENST00000477243 UBL5Q9BZL1 73 aa1.28□□□□□ -2.2
HMGN4-202ENST00000477243 FXYD6Q9H0Q3 95 aa1.28□□□□□ -2.2
HMGN4-202ENST00000477243 SPRR2DP22532 72 aa1.27□□□□□ -2.21
HMGN4-202ENST00000477243 COX7BP24311 80 aa1.27□□□□□ -2.21
HMGN4-202ENST00000477243 SSBP3-AS1Q7Z2R9 100 aa1.26□□□□□ -2.21
HMGN4-202ENST00000477243 NDUFA4O00483 81 aa1.25□□□□□ -2.21
HMGN4-202ENST00000477243 SERF2P84101 59 aa1.25□□□□□ -2.21
HMGN4-202ENST00000477243 ENHOQ6UWT2 76 aa1.25□□□□□ -2.21
HMGN4-202ENST00000477243 KRTAP4-8A0A0G2JLE6 195 aa1.24□□□□□ -2.21
HMGN4-202ENST00000477243 LINC00959A0A1B0GUT2 108 aa1.24□□□□□ -2.21
HMGN4-202ENST00000477243 KRTAP9-6A8MVA2 160 aa1.24□□□□□ -2.21
HMGN4-202ENST00000477243 DEFB114Q30KQ6 69 aa1.24□□□□□ -2.21
HMGN4-202ENST00000477243 KRTAP4-11Q9BYQ6 195 aa1.24□□□□□ -2.21
HMGN4-202ENST00000477243 DEFB4AO15263 64 aa1.22□□□□□ -2.21
HMGN4-202ENST00000477243 ANGP03950 147 aaKnown RBP1.22□□□□□ -2.21
HMGN4-202ENST00000477243 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
HMGN4-202ENST00000477243 CPSF4LA6NMK7 179 aaKnown RBP1.21□□□□□ -2.22
HMGN4-202ENST00000477243 K7EMI3 77 aa1.21□□□□□ -2.22
HMGN4-202ENST00000477243 FCER1GP30273 86 aa1.21□□□□□ -2.22
HMGN4-202ENST00000477243 KRTAP12-1P59990 96 aa1.21□□□□□ -2.22
HMGN4-202ENST00000477243 KRTAP10-10P60014 251 aa1.21□□□□□ -2.22
HMGN4-202ENST00000477243 DEFB135Q30KP9 77 aa1.21□□□□□ -2.22
HMGN4-202ENST00000477243 LCE3EQ5T5B0 92 aa1.21□□□□□ -2.22
HMGN4-202ENST00000477243 NMES1Q9C002 83 aa1.21□□□□□ -2.22
HMGN4-202ENST00000477243 KCNQ1DNQ9H478 68 aa1.21□□□□□ -2.22
HMGN4-202ENST00000477243 M0R1W7 72 aa1.2□□□□□ -2.22
HMGN4-202ENST00000477243 ARL14EPLP0DKL9 152 aa1.2□□□□□ -2.22
HMGN4-202ENST00000477243 KRTAP10-7P60409 375 aaPredicted RBP1.2□□□□□ -2.22
HMGN4-202ENST00000477243 PIGYQ3MUY2 71 aa1.2□□□□□ -2.22
HMGN4-202ENST00000477243 USMG5Q96IX5 58 aa1.2□□□□□ -2.22
HMGN4-202ENST00000477243 CMC2Q9NRP2 79 aa1.2□□□□□ -2.22
HMGN4-202ENST00000477243 DEFB131BA0A096LNP1 70 aa1.19□□□□□ -2.22
HMGN4-202ENST00000477243 KRTAP13-1Q8IUC0 172 aa1.19□□□□□ -2.22
HMGN4-202ENST00000477243 PRH1P02810 166 aa1.18□□□□□ -2.22
HMGN4-202ENST00000477243 PLNP26678 52 aa1.18□□□□□ -2.22
HMGN4-202ENST00000477243 TOMM5Q8N4H5 51 aa1.18□□□□□ -2.22
HMGN4-202ENST00000477243 CNFNQ9BYD5 112 aa1.18□□□□□ -2.22
HMGN4-202ENST00000477243 TP53AIP1Q9HCN2 124 aa1.18□□□□□ -2.22
HMGN4-202ENST00000477243 CRIPTQ9P021 101 aa1.18□□□□□ -2.22
HMGN4-202ENST00000477243 KAAG1Q9UBP8 84 aa1.18□□□□□ -2.22
HMGN4-202ENST00000477243 MUC17Q685J3 4493 aa1.17□□□□□ -2.22
HMGN4-202ENST00000477243 ETDCA0A1B0GVM5 59 aa1.17□□□□□ -2.22
HMGN4-202ENST00000477243 I3L3M4 83 aa1.17□□□□□ -2.22
HMGN4-202ENST00000477243 KRTAP5-8O75690 187 aa1.17□□□□□ -2.22
HMGN4-202ENST00000477243 KRTAP10-5P60370 271 aa1.17□□□□□ -2.22
HMGN4-202ENST00000477243 SPINK9Q5DT21 86 aa1.16□□□□□ -2.22
HMGN4-202ENST00000477243 LCE1EQ5T753 118 aa1.16□□□□□ -2.22
HMGN4-202ENST00000477243 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
HMGN4-202ENST00000477243 I3L2K1 104 aa1.15□□□□□ -2.23
HMGN4-202ENST00000477243 MT4P47944 62 aa1.15□□□□□ -2.23
HMGN4-202ENST00000477243 MINOS1Q5TGZ0 78 aa1.15□□□□□ -2.23
HMGN4-202ENST00000477243 COX6B2Q6YFQ2 88 aa1.15□□□□□ -2.23
HMGN4-202ENST00000477243 K7EQZ3 153 aa1.14□□□□□ -2.23
HMGN4-202ENST00000477243 KRTAP12-4P60329 112 aa1.14□□□□□ -2.23
HMGN4-202ENST00000477243 IGIPA6NJ69 53 aa1.13□□□□□ -2.23
HMGN4-202ENST00000477243 HTN3P15516 51 aa1.13□□□□□ -2.23
HMGN4-202ENST00000477243 Q6ZSA8 131 aa1.13□□□□□ -2.23
HMGN4-202ENST00000477243 MRPL34Q9BQ48 92 aaKnown RBP1.13□□□□□ -2.23
HMGN4-202ENST00000477243 C10orf95Q9H7T3 257 aa1.13□□□□□ -2.23
HMGN4-202ENST00000477243 ABRACLQ9P1F3 81 aa1.13□□□□□ -2.23
HMGN4-202ENST00000477243 COX6A2Q02221 97 aa1.12□□□□□ -2.23
HMGN4-202ENST00000477243 PRO0255Q9UI72 69 aa1.12□□□□□ -2.23
HMGN4-202ENST00000477243 DNAH8Q96JB1 4490 aa1.12□□□□□ -2.23
HMGN4-202ENST00000477243 H0YGX0 51 aa1.11□□□□□ -2.23
HMGN4-202ENST00000477243 MT1HP80294 61 aa1.11□□□□□ -2.23
HMGN4-202ENST00000477243 Q8IZM0 81 aa1.11□□□□□ -2.23
HMGN4-202ENST00000477243 SMIM27A0A1W2PRY6 76 aa1.1□□□□□ -2.23
HMGN4-202ENST00000477243 LCE3DQ9BYE3 92 aa1.1□□□□□ -2.23
HMGN4-202ENST00000477243 M0R2T5 61 aa1.09□□□□□ -2.23
HMGN4-202ENST00000477243 SPART-AS1P0CW21 52 aa1.09□□□□□ -2.23
HMGN4-202ENST00000477243 KRTAP4-1Q9BYQ7 146 aa1.09□□□□□ -2.23
HMGN4-202ENST00000477243 LINC01546A6NGU7 62 aa1.08□□□□□ -2.24
HMGN4-202ENST00000477243 RPS27LQ71UM5 84 aaKnown RBP1.07□□□□□ -2.24
HMGN4-202ENST00000477243 LEAP2Q969E1 77 aa1.07□□□□□ -2.24
HMGN4-202ENST00000477243 TMEM167BQ9NRX6 74 aa1.07□□□□□ -2.24
HMGN4-202ENST00000477243 KRTAP19-2Q3LHN2 52 aa1.06□□□□□ -2.24
HMGN4-202ENST00000477243 CDKN2A-AS1Q9UH64 79 aa1.06□□□□□ -2.24
HMGN4-202ENST00000477243 CRIP1P50238 77 aa1.05□□□□□ -2.24
HMGN4-202ENST00000477243 A0A0D9SG42 100 aa1.04□□□□□ -2.24
HMGN4-202ENST00000477243 LINC00158P58513 81 aa1.04□□□□□ -2.24
HMGN4-202ENST00000477243 H3BUA1 57 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 NDUFA3O95167 84 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 DEFB130BP0DP73 79 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 DEFB130AP0DP74 79 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 DEFB131AP59861 70 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 KRTAP12-3P60328 96 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 SPINK6Q6UWN8 80 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 KRTAP5-2Q701N4 177 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
HMGN4-202ENST00000477243 APELAP0DMC3 54 aa1.02□□□□□ -2.25
HMGN4-202ENST00000477243 SPRR1AP35321 89 aa1.02□□□□□ -2.25
HMGN4-202ENST00000477243 DEFB105AQ8NG35 78 aa1.02□□□□□ -2.25
HMGN4-202ENST00000477243 H0YAA0 97 aa1.01□□□□□ -2.25
HMGN4-202ENST00000477243 TIMM8BQ9Y5J9 83 aaPredicted RBP1.01□□□□□ -2.25
HMGN4-202ENST00000477243 A0A096LPF7 62 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms