RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HCG22E2RYF7 251 aa3.34□□□□□ -1.88
BRCA1-214ENST00000477152 CSAG1Q6PB30 78 aa3.34□□□□□ -1.88
BRCA1-214ENST00000477152 Q5VV11 94 aa3.33□□□□□ -1.88
BRCA1-214ENST00000477152 NAA38Q9BRA0 125 aaKnown RBP3.33□□□□□ -1.88
BRCA1-214ENST00000477152 C4orf26Q17RF5 130 aa3.32□□□□□ -1.88
BRCA1-214ENST00000477152 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
BRCA1-214ENST00000477152 S4R3F8 94 aa3.32□□□□□ -1.88
BRCA1-214ENST00000477152 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
BRCA1-214ENST00000477152 C5orf47Q569G3 176 aa3.32□□□□□ -1.88
BRCA1-214ENST00000477152 Q5W150 140 aa3.31□□□□□ -1.88
BRCA1-214ENST00000477152 A8MU10 97 aa3.29□□□□□ -1.88
BRCA1-214ENST00000477152 UBL5Q9BZL1 73 aa3.29□□□□□ -1.88
BRCA1-214ENST00000477152 C1orf64Q8NEQ6 169 aa3.29□□□□□ -1.88
BRCA1-214ENST00000477152 TP53AIP1Q9HCN2 124 aa3.29□□□□□ -1.88
BRCA1-214ENST00000477152 BATFQ16520 125 aa3.28□□□□□ -1.88
BRCA1-214ENST00000477152 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
BRCA1-214ENST00000477152 IMUPQ9GZP8 106 aa3.27□□□□□ -1.89
BRCA1-214ENST00000477152 CRIPTQ9P021 101 aa3.27□□□□□ -1.89
BRCA1-214ENST00000477152 SMIM6P0DI80 62 aa3.26□□□□□ -1.89
BRCA1-214ENST00000477152 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
BRCA1-214ENST00000477152 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
BRCA1-214ENST00000477152 A0A1W2PPM0 123 aa3.25□□□□□ -1.89
BRCA1-214ENST00000477152 KRTAP19-8Q3LI54 63 aa3.25□□□□□ -1.89
BRCA1-214ENST00000477152 Q8N9L7 120 aa3.25□□□□□ -1.89
BRCA1-214ENST00000477152 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
BRCA1-214ENST00000477152 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
BRCA1-214ENST00000477152 LCA10Q71F78 164 aa3.24□□□□□ -1.89
BRCA1-214ENST00000477152 MT1BP07438 61 aa3.23□□□□□ -1.89
BRCA1-214ENST00000477152 SPCS1Q9Y6A9 102 aa3.21□□□□□ -1.89
BRCA1-214ENST00000477152 TAX1BP3O14907 124 aa3.2□□□□□ -1.9
BRCA1-214ENST00000477152 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
BRCA1-214ENST00000477152 LOC101927531A0A1B0GV80 90 aa3.18□□□□□ -1.9
BRCA1-214ENST00000477152 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
BRCA1-214ENST00000477152 NDUFC1O43677 76 aa3.17□□□□□ -1.9
BRCA1-214ENST00000477152 CYP4F30PQ9H0H9 118 aa3.16□□□□□ -1.9
BRCA1-214ENST00000477152 TRAV22A0A0B4J277 110 aa3.16□□□□□ -1.9
BRCA1-214ENST00000477152 H0YAA0 97 aa3.15□□□□□ -1.91
BRCA1-214ENST00000477152 NEBP20929 6669 aa3.15□□□□□ -1.91
BRCA1-214ENST00000477152 ATOX1O00244 68 aa3.14□□□□□ -1.91
BRCA1-214ENST00000477152 ACYP1P07311 99 aa3.14□□□□□ -1.91
BRCA1-214ENST00000477152 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
BRCA1-214ENST00000477152 CAMK2N1Q7Z7J9 78 aa3.14□□□□□ -1.91
BRCA1-214ENST00000477152 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
BRCA1-214ENST00000477152 COL5A1-AS1Q5SY13 56 aa3.13□□□□□ -1.91
BRCA1-214ENST00000477152 GTF2H5Q6ZYL4 71 aa3.13□□□□□ -1.91
BRCA1-214ENST00000477152 PLAC4Q8WY50 150 aa3.13□□□□□ -1.91
BRCA1-214ENST00000477152 A8MUN3 132 aa3.12□□□□□ -1.91
BRCA1-214ENST00000477152 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
BRCA1-214ENST00000477152 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
BRCA1-214ENST00000477152 K7EP34 96 aa3.12□□□□□ -1.91
BRCA1-214ENST00000477152 UQCRQO14949 82 aa3.11□□□□□ -1.91
BRCA1-214ENST00000477152 C20orf197Q8N268 126 aa3.11□□□□□ -1.91
BRCA1-214ENST00000477152 F8W1H4 67 aa3.11□□□□□ -1.91
BRCA1-214ENST00000477152 PRO0461Q9UI25 63 aa3.09□□□□□ -1.91
BRCA1-214ENST00000477152 ATP5EP2Q5VTU8 51 aa3.09□□□□□ -1.92
BRCA1-214ENST00000477152 ADM2Q7Z4H4 148 aa3.09□□□□□ -1.92
BRCA1-214ENST00000477152 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.92
BRCA1-214ENST00000477152 MUC12Q9UKN1 5478 aa3.08□□□□□ -1.92
BRCA1-214ENST00000477152 H0Y9P7 68 aa3.08□□□□□ -1.92
BRCA1-214ENST00000477152 SPRR2EP22531 72 aa3.08□□□□□ -1.92
BRCA1-214ENST00000477152 SPRR2BP35325 72 aa3.08□□□□□ -1.92
BRCA1-214ENST00000477152 SPRR2AP35326 72 aa3.08□□□□□ -1.92
BRCA1-214ENST00000477152 R4GN34 69 aa3.07□□□□□ -1.92
BRCA1-214ENST00000477152 HIST1H4AP62805 103 aaKnown RBP3.06□□□□□ -1.92
BRCA1-214ENST00000477152 KRTAP8-1Q8IUC2 63 aa3.06□□□□□ -1.92
BRCA1-214ENST00000477152 A0A087WVE0 104 aa3.05□□□□□ -1.92
BRCA1-214ENST00000477152 ETDBQ3ZM63 59 aa3.05□□□□□ -1.92
BRCA1-214ENST00000477152 MP68P56378 58 aa3.04□□□□□ -1.92
BRCA1-214ENST00000477152 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
BRCA1-214ENST00000477152 FAM240AA0A1B0GVK7 77 aa3.02□□□□□ -1.93
BRCA1-214ENST00000477152 LINC00208Q96KT6 92 aa3.01□□□□□ -1.93
BRCA1-214ENST00000477152 KMT2DO14686 5537 aa3.01□□□□□ -1.93
BRCA1-214ENST00000477152 LOC105371267A0A1B0GV96 52 aa3.01□□□□□ -1.93
BRCA1-214ENST00000477152 M0QZ58 72 aa3□□□□□ -1.93
BRCA1-214ENST00000477152 MT1XP80297 61 aa3□□□□□ -1.93
BRCA1-214ENST00000477152 H3BPC8 53 aa2.98□□□□□ -1.93
BRCA1-214ENST00000477152 SPRR2DP22532 72 aa2.98□□□□□ -1.93
BRCA1-214ENST00000477152 SMIM26A0A096LP01 95 aa2.98□□□□□ -1.93
BRCA1-214ENST00000477152 LINC00643Q86TS7 51 aa2.97□□□□□ -1.93
BRCA1-214ENST00000477152 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
BRCA1-214ENST00000477152 LINC01554Q52M75 96 aa2.96□□□□□ -1.94
BRCA1-214ENST00000477152 SPTSSBQ8NFR3 76 aa2.96□□□□□ -1.94
BRCA1-214ENST00000477152 MT-ATP8P03928 68 aa2.94□□□□□ -1.94
BRCA1-214ENST00000477152 P0C880 135 aa2.94□□□□□ -1.94
BRCA1-214ENST00000477152 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-214ENST00000477152 DMAC1Q96GE9 116 aa2.92□□□□□ -1.94
BRCA1-214ENST00000477152 TRAV7A0A075B6U4 112 aa2.92□□□□□ -1.94
BRCA1-214ENST00000477152 SCGB1A1P11684 91 aa2.92□□□□□ -1.94
BRCA1-214ENST00000477152 ACYP2P14621 99 aa2.91□□□□□ -1.94
BRCA1-214ENST00000477152 J3QR89 54 aa2.87□□□□□ -1.95
BRCA1-214ENST00000477152 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
BRCA1-214ENST00000477152 SMIM20Q8N5G0 67 aa2.83□□□□□ -1.96
BRCA1-214ENST00000477152 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
BRCA1-214ENST00000477152 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
BRCA1-214ENST00000477152 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
BRCA1-214ENST00000477152 PSPHP1O15172 72 aa2.73□□□□□ -1.97
BRCA1-214ENST00000477152 V9GYY9 64 aa2.73□□□□□ -1.97
BRCA1-214ENST00000477152 SERP1Q9Y6X1 66 aa2.72□□□□□ -1.97
BRCA1-214ENST00000477152 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
BRCA1-214ENST00000477152 SPANXA2-OT1Q8N9U9 137 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms