RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
SSX2IP-206ENST00000476905 A0A087WVE0 104 aa4.25□□□□□ -1.73
SSX2IP-206ENST00000476905 TP53AIP1Q9HCN2 124 aa4.24□□□□□ -1.73
SSX2IP-206ENST00000476905 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
SSX2IP-206ENST00000476905 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
SSX2IP-206ENST00000476905 ATP5EP2Q5VTU8 51 aa4.22□□□□□ -1.73
SSX2IP-206ENST00000476905 LINC00643Q86TS7 51 aa4.22□□□□□ -1.73
SSX2IP-206ENST00000476905 CYP4F30PQ9H0H9 118 aa4.22□□□□□ -1.73
SSX2IP-206ENST00000476905 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.73
SSX2IP-206ENST00000476905 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
SSX2IP-206ENST00000476905 C1orf64Q8NEQ6 169 aa4.2□□□□□ -1.74
SSX2IP-206ENST00000476905 ANAPC13Q9BS18 74 aa4.2□□□□□ -1.74
SSX2IP-206ENST00000476905 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
SSX2IP-206ENST00000476905 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
SSX2IP-206ENST00000476905 MP68P56378 58 aa4.17□□□□□ -1.74
SSX2IP-206ENST00000476905 LCA10Q71F78 164 aa4.17□□□□□ -1.74
SSX2IP-206ENST00000476905 UQCRQO14949 82 aa4.15□□□□□ -1.74
SSX2IP-206ENST00000476905 LOC101927531A0A1B0GV80 90 aa4.15□□□□□ -1.75
SSX2IP-206ENST00000476905 H0Y9P7 68 aa4.14□□□□□ -1.75
SSX2IP-206ENST00000476905 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
SSX2IP-206ENST00000476905 S4R3F8 94 aa4.14□□□□□ -1.75
SSX2IP-206ENST00000476905 SMIM20Q8N5G0 67 aa4.14□□□□□ -1.75
SSX2IP-206ENST00000476905 ADM2Q7Z4H4 148 aa4.12□□□□□ -1.75
SSX2IP-206ENST00000476905 KLKP1Q107X0 134 aa4.12□□□□□ -1.75
SSX2IP-206ENST00000476905 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
SSX2IP-206ENST00000476905 CSAG1Q6PB30 78 aa4.1□□□□□ -1.75
SSX2IP-206ENST00000476905 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
SSX2IP-206ENST00000476905 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
SSX2IP-206ENST00000476905 J3QR89 54 aa4.09□□□□□ -1.76
SSX2IP-206ENST00000476905 ATOX1O00244 68 aa4.09□□□□□ -1.76
SSX2IP-206ENST00000476905 MT-ATP8P03928 68 aa4.07□□□□□ -1.76
SSX2IP-206ENST00000476905 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
SSX2IP-206ENST00000476905 MT1BP07438 61 aa4.05□□□□□ -1.76
SSX2IP-206ENST00000476905 SPRR2GQ9BYE4 73 aa4.05□□□□□ -1.76
SSX2IP-206ENST00000476905 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
SSX2IP-206ENST00000476905 FAM236AA0A1B0GUQ0 79 aa4.03□□□□□ -1.76
SSX2IP-206ENST00000476905 FAM236BA0A1B0GV22 79 aa4.03□□□□□ -1.76
SSX2IP-206ENST00000476905 KRTAP19-8Q3LI54 63 aa4.02□□□□□ -1.77
SSX2IP-206ENST00000476905 IMUPQ9GZP8 106 aa4.01□□□□□ -1.77
SSX2IP-206ENST00000476905 K7ERU9 68 aa4□□□□□ -1.77
SSX2IP-206ENST00000476905 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
SSX2IP-206ENST00000476905 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
SSX2IP-206ENST00000476905 SCGB1A1P11684 91 aa4□□□□□ -1.77
SSX2IP-206ENST00000476905 A8MUN3 132 aa3.99□□□□□ -1.77
SSX2IP-206ENST00000476905 H3BPC8 53 aa3.98□□□□□ -1.77
SSX2IP-206ENST00000476905 NDUFC1O43677 76 aa3.98□□□□□ -1.77
SSX2IP-206ENST00000476905 H0YAA0 97 aa3.96□□□□□ -1.78
SSX2IP-206ENST00000476905 DMAC1Q96GE9 116 aa3.96□□□□□ -1.78
SSX2IP-206ENST00000476905 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
SSX2IP-206ENST00000476905 Q5VV11 94 aa3.93□□□□□ -1.78
SSX2IP-206ENST00000476905 A6NED7 52 aa3.92□□□□□ -1.78
SSX2IP-206ENST00000476905 P0C880 135 aa3.92□□□□□ -1.78
SSX2IP-206ENST00000476905 CRIPTQ9P021 101 aa3.91□□□□□ -1.78
SSX2IP-206ENST00000476905 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
SSX2IP-206ENST00000476905 SNURFQ9Y675 71 aa3.9□□□□□ -1.79
SSX2IP-206ENST00000476905 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
SSX2IP-206ENST00000476905 A6NN06 94 aa3.88□□□□□ -1.79
SSX2IP-206ENST00000476905 C20orf197Q8N268 126 aa3.83□□□□□ -1.8
SSX2IP-206ENST00000476905 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
SSX2IP-206ENST00000476905 ACYP2P14621 99 aa3.83□□□□□ -1.8
SSX2IP-206ENST00000476905 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
SSX2IP-206ENST00000476905 K7ERS5 55 aa3.82□□□□□ -1.8
SSX2IP-206ENST00000476905 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
SSX2IP-206ENST00000476905 KMT2DO14686 5537 aa3.82□□□□□ -1.8
SSX2IP-206ENST00000476905 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
SSX2IP-206ENST00000476905 MT1XP80297 61 aa3.81□□□□□ -1.8
SSX2IP-206ENST00000476905 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
SSX2IP-206ENST00000476905 M0QZ58 72 aa3.78□□□□□ -1.8
SSX2IP-206ENST00000476905 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
SSX2IP-206ENST00000476905 R4GN34 69 aa3.78□□□□□ -1.8
SSX2IP-206ENST00000476905 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
SSX2IP-206ENST00000476905 COX7CP15954 63 aa3.74□□□□□ -1.81
SSX2IP-206ENST00000476905 NEBP20929 6669 aa3.73□□□□□ -1.81
SSX2IP-206ENST00000476905 LINC01554Q52M75 96 aa3.73□□□□□ -1.81
SSX2IP-206ENST00000476905 CHKB-CPT1BH3BT56 60 aa3.72□□□□□ -1.81
SSX2IP-206ENST00000476905 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
SSX2IP-206ENST00000476905 PLAC4Q8WY50 150 aa3.72□□□□□ -1.81
SSX2IP-206ENST00000476905 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.82
SSX2IP-206ENST00000476905 H7BZZ5 65 aa3.7□□□□□ -1.82
SSX2IP-206ENST00000476905 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
SSX2IP-206ENST00000476905 MT3P25713 68 aa3.7□□□□□ -1.82
SSX2IP-206ENST00000476905 SPTSSBQ8NFR3 76 aa3.7□□□□□ -1.82
SSX2IP-206ENST00000476905 COA5Q86WW8 74 aa3.69□□□□□ -1.82
SSX2IP-206ENST00000476905 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
SSX2IP-206ENST00000476905 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
SSX2IP-206ENST00000476905 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
SSX2IP-206ENST00000476905 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
SSX2IP-206ENST00000476905 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
SSX2IP-206ENST00000476905 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
SSX2IP-206ENST00000476905 CCDC179H3BU77 68 aa3.62□□□□□ -1.83
SSX2IP-206ENST00000476905 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
SSX2IP-206ENST00000476905 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
SSX2IP-206ENST00000476905 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
SSX2IP-206ENST00000476905 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
SSX2IP-206ENST00000476905 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
SSX2IP-206ENST00000476905 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
SSX2IP-206ENST00000476905 A0A1B0GU33 70 aa3.56□□□□□ -1.84
SSX2IP-206ENST00000476905 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
SSX2IP-206ENST00000476905 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
SSX2IP-206ENST00000476905 A0A0D9SG42 100 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms