RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 USH2AO75445 5202 aa5.37□□□□□ -1.55
COL4A6-205ENST00000468338 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
COL4A6-205ENST00000468338 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
COL4A6-205ENST00000468338 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
COL4A6-205ENST00000468338 FAM240AA0A1B0GVK7 77 aa5.3□□□□□ -1.56
COL4A6-205ENST00000468338 ACYP1P07311 99 aa5.3□□□□□ -1.56
COL4A6-205ENST00000468338 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
COL4A6-205ENST00000468338 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
COL4A6-205ENST00000468338 ATP5EP2Q5VTU8 51 aa5.24□□□□□ -1.57
COL4A6-205ENST00000468338 C1orf64Q8NEQ6 169 aa5.2□□□□□ -1.58
COL4A6-205ENST00000468338 CYP4F30PQ9H0H9 118 aa5.2□□□□□ -1.58
COL4A6-205ENST00000468338 A0A1B0GV90 55 aa5.19□□□□□ -1.58
COL4A6-205ENST00000468338 TRAV22A0A0B4J277 110 aa5.18□□□□□ -1.58
COL4A6-205ENST00000468338 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
COL4A6-205ENST00000468338 FCGBPQ9Y6R7 5405 aaPredicted RBP5.17□□□□□ -1.58
COL4A6-205ENST00000468338 HIST1H4AP62805 103 aaKnown RBP5.16□□□□□ -1.58
COL4A6-205ENST00000468338 LOC101927531A0A1B0GV80 90 aa5.15□□□□□ -1.59
COL4A6-205ENST00000468338 C5orf47Q569G3 176 aa5.15□□□□□ -1.59
COL4A6-205ENST00000468338 S4R3F8 94 aa5.15□□□□□ -1.59
COL4A6-205ENST00000468338 UQCRQO14949 82 aa5.14□□□□□ -1.59
COL4A6-205ENST00000468338 KRTAP19-6Q3LI70 58 aa5.14□□□□□ -1.59
COL4A6-205ENST00000468338 LCA10Q71F78 164 aa5.14□□□□□ -1.59
COL4A6-205ENST00000468338 CSAG1Q6PB30 78 aa5.13□□□□□ -1.59
COL4A6-205ENST00000468338 A0A087WVE0 104 aa5.12□□□□□ -1.59
COL4A6-205ENST00000468338 ATOX1O00244 68 aa5.1□□□□□ -1.59
COL4A6-205ENST00000468338 H0Y9P7 68 aa5.09□□□□□ -1.59
COL4A6-205ENST00000468338 J3QR89 54 aa5.05□□□□□ -1.6
COL4A6-205ENST00000468338 SPRR2GQ9BYE4 73 aa5.05□□□□□ -1.6
COL4A6-205ENST00000468338 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
COL4A6-205ENST00000468338 FAM236AA0A1B0GUQ0 79 aa5.04□□□□□ -1.6
COL4A6-205ENST00000468338 FAM236BA0A1B0GV22 79 aa5.04□□□□□ -1.6
COL4A6-205ENST00000468338 LINC00208Q96KT6 92 aa5.02□□□□□ -1.61
COL4A6-205ENST00000468338 A8MUN3 132 aa5.01□□□□□ -1.61
COL4A6-205ENST00000468338 KLKP1Q107X0 134 aa5.01□□□□□ -1.61
COL4A6-205ENST00000468338 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
COL4A6-205ENST00000468338 MT1BP07438 61 aa5□□□□□ -1.61
COL4A6-205ENST00000468338 MP68P56378 58 aa4.99□□□□□ -1.61
COL4A6-205ENST00000468338 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
COL4A6-205ENST00000468338 H0YAA0 97 aa4.97□□□□□ -1.61
COL4A6-205ENST00000468338 H3BPC8 53 aa4.97□□□□□ -1.61
COL4A6-205ENST00000468338 NDUFC1O43677 76 aa4.96□□□□□ -1.62
COL4A6-205ENST00000468338 IMUPQ9GZP8 106 aa4.96□□□□□ -1.62
COL4A6-205ENST00000468338 Q5VV11 94 aa4.95□□□□□ -1.62
COL4A6-205ENST00000468338 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
COL4A6-205ENST00000468338 MACF1Q9UPN3 7388 aaKnown RBP4.94□□□□□ -1.62
COL4A6-205ENST00000468338 SCGB1A1P11684 91 aa4.91□□□□□ -1.62
COL4A6-205ENST00000468338 DMAC1Q96GE9 116 aa4.89□□□□□ -1.63
COL4A6-205ENST00000468338 K7ERU9 68 aa4.88□□□□□ -1.63
COL4A6-205ENST00000468338 MT-ATP8P03928 68 aa4.88□□□□□ -1.63
COL4A6-205ENST00000468338 A6NN06 94 aa4.87□□□□□ -1.63
COL4A6-205ENST00000468338 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
COL4A6-205ENST00000468338 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
COL4A6-205ENST00000468338 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
COL4A6-205ENST00000468338 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
COL4A6-205ENST00000468338 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
COL4A6-205ENST00000468338 TRAV7A0A075B6U4 112 aa4.83□□□□□ -1.64
COL4A6-205ENST00000468338 SMIM20Q8N5G0 67 aa4.83□□□□□ -1.64
COL4A6-205ENST00000468338 V9GYY9 64 aa4.81□□□□□ -1.64
COL4A6-205ENST00000468338 P0C880 135 aa4.78□□□□□ -1.64
COL4A6-205ENST00000468338 ACYP2P14621 99 aa4.75□□□□□ -1.65
COL4A6-205ENST00000468338 C20orf197Q8N268 126 aa4.74□□□□□ -1.65
COL4A6-205ENST00000468338 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
COL4A6-205ENST00000468338 R4GN34 69 aa4.72□□□□□ -1.65
COL4A6-205ENST00000468338 SNURFQ9Y675 71 aa4.7□□□□□ -1.66
COL4A6-205ENST00000468338 MT1XP80297 61 aa4.69□□□□□ -1.66
COL4A6-205ENST00000468338 M0QZ58 72 aa4.68□□□□□ -1.66
COL4A6-205ENST00000468338 SERP2Q8N6R1 65 aa4.68□□□□□ -1.66
COL4A6-205ENST00000468338 SPANXA2-OT1Q8N9U9 137 aa4.68□□□□□ -1.66
COL4A6-205ENST00000468338 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
COL4A6-205ENST00000468338 PLAC4Q8WY50 150 aa4.67□□□□□ -1.66
COL4A6-205ENST00000468338 A8MU10 97 aa4.66□□□□□ -1.66
COL4A6-205ENST00000468338 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
COL4A6-205ENST00000468338 SPTSSBQ8NFR3 76 aa4.66□□□□□ -1.66
COL4A6-205ENST00000468338 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.67
COL4A6-205ENST00000468338 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
COL4A6-205ENST00000468338 PSPHP1O15172 72 aa4.63□□□□□ -1.67
COL4A6-205ENST00000468338 CHKB-CPT1BH3BT56 60 aa4.61□□□□□ -1.67
COL4A6-205ENST00000468338 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
COL4A6-205ENST00000468338 KMT2DO14686 5537 aa4.59□□□□□ -1.68
COL4A6-205ENST00000468338 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
COL4A6-205ENST00000468338 NEBP20929 6669 aa4.56□□□□□ -1.68
COL4A6-205ENST00000468338 COX7CP15954 63 aa4.55□□□□□ -1.68
COL4A6-205ENST00000468338 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
COL4A6-205ENST00000468338 COA5Q86WW8 74 aa4.51□□□□□ -1.69
COL4A6-205ENST00000468338 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
COL4A6-205ENST00000468338 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
COL4A6-205ENST00000468338 H7BZZ5 65 aa4.49□□□□□ -1.69
COL4A6-205ENST00000468338 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
COL4A6-205ENST00000468338 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
COL4A6-205ENST00000468338 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
COL4A6-205ENST00000468338 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
COL4A6-205ENST00000468338 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
COL4A6-205ENST00000468338 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
COL4A6-205ENST00000468338 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
COL4A6-205ENST00000468338 SPRR2EP22531 72 aa4.38□□□□□ -1.71
COL4A6-205ENST00000468338 SPRR2BP35325 72 aa4.38□□□□□ -1.71
COL4A6-205ENST00000468338 SPRR2AP35326 72 aa4.38□□□□□ -1.71
COL4A6-205ENST00000468338 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
COL4A6-205ENST00000468338 ANAPC13Q9BS18 74 aa4.36□□□□□ -1.71
COL4A6-205ENST00000468338 A0A1B0GU33 70 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms