RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
HMGXB4-206ENST00000466438 C5orf47Q569G3 176 aa7.36□□□□□ -1.23
HMGXB4-206ENST00000466438 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
HMGXB4-206ENST00000466438 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
HMGXB4-206ENST00000466438 PCP4P48539 62 aa7.35□□□□□ -1.23
HMGXB4-206ENST00000466438 MP68P56378 58 aa7.35□□□□□ -1.23
HMGXB4-206ENST00000466438 A8MUU9 505 aa7.34□□□□□ -1.23
HMGXB4-206ENST00000466438 LCE4AQ5TA78 99 aa7.32□□□□□ -1.24
HMGXB4-206ENST00000466438 H0Y9P7 68 aa7.31□□□□□ -1.24
HMGXB4-206ENST00000466438 H3BPC8 53 aa7.31□□□□□ -1.24
HMGXB4-206ENST00000466438 ZCCHC13Q8WW36 166 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-206ENST00000466438 C20orf197Q8N268 126 aa7.27□□□□□ -1.25
HMGXB4-206ENST00000466438 FAM236DA0A1B0GTK5 79 aa7.26□□□□□ -1.25
HMGXB4-206ENST00000466438 FAM236CP0DP71 79 aa7.26□□□□□ -1.25
HMGXB4-206ENST00000466438 LOC101927531A0A1B0GV80 90 aa7.24□□□□□ -1.25
HMGXB4-206ENST00000466438 CCDC179H3BU77 68 aa7.24□□□□□ -1.25
HMGXB4-206ENST00000466438 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
HMGXB4-206ENST00000466438 LINC00208Q96KT6 92 aa7.24□□□□□ -1.25
HMGXB4-206ENST00000466438 Q5W150 140 aa7.23□□□□□ -1.25
HMGXB4-206ENST00000466438 C1orf64Q8NEQ6 169 aa7.23□□□□□ -1.25
HMGXB4-206ENST00000466438 SNURFQ9Y675 71 aa7.21□□□□□ -1.26
HMGXB4-206ENST00000466438 NDUFC1O43677 76 aa7.2□□□□□ -1.26
HMGXB4-206ENST00000466438 MDN1Q9NU22 5596 aa7.2□□□□□ -1.26
HMGXB4-206ENST00000466438 KRTAP9-9Q9BYP9 154 aa7.19□□□□□ -1.26
HMGXB4-206ENST00000466438 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
HMGXB4-206ENST00000466438 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
HMGXB4-206ENST00000466438 C7orf65Q6ZTY9 151 aa7.17□□□□□ -1.26
HMGXB4-206ENST00000466438 KRTAP2-3P0C7H8 128 aa7.16□□□□□ -1.26
HMGXB4-206ENST00000466438 KRTAP2-4Q9BYR9 128 aa7.16□□□□□ -1.26
HMGXB4-206ENST00000466438 IGKV2D-30A0A075B6S6 120 aa7.15□□□□□ -1.26
HMGXB4-206ENST00000466438 RBM12B-AS1Q9P1G2 102 aa7.14□□□□□ -1.27
HMGXB4-206ENST00000466438 MPLKIPQ8TAP9 179 aa7.13□□□□□ -1.27
HMGXB4-206ENST00000466438 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
HMGXB4-206ENST00000466438 KMT2DO14686 5537 aa7.12□□□□□ -1.27
HMGXB4-206ENST00000466438 H7BZZ5 65 aa7.1□□□□□ -1.27
HMGXB4-206ENST00000466438 KRTAP5-9P26371 169 aa7.1□□□□□ -1.27
HMGXB4-206ENST00000466438 CYSTM1Q9H1C7 97 aa7.09□□□□□ -1.27
HMGXB4-206ENST00000466438 SPINK7P58062 85 aa7.08□□□□□ -1.28
HMGXB4-206ENST00000466438 TMEM258P61165 79 aa7.08□□□□□ -1.28
HMGXB4-206ENST00000466438 HRES1P13985 223 aa7.07□□□□□ -1.28
HMGXB4-206ENST00000466438 ATP5EP56381 51 aaPredicted RBP7.05□□□□□ -1.28
HMGXB4-206ENST00000466438 SPANXA2-OT1Q8N9U9 137 aa7.05□□□□□ -1.28
HMGXB4-206ENST00000466438 A6NN06 94 aa6.99□□□□□ -1.29
HMGXB4-206ENST00000466438 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
HMGXB4-206ENST00000466438 A8MUN3 132 aa6.94□□□□□ -1.3
HMGXB4-206ENST00000466438 C4orf26Q17RF5 130 aa6.93□□□□□ -1.3
HMGXB4-206ENST00000466438 DMAC1Q96GE9 116 aa6.92□□□□□ -1.3
HMGXB4-206ENST00000466438 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
HMGXB4-206ENST00000466438 ACYP2P14621 99 aa6.89□□□□□ -1.31
HMGXB4-206ENST00000466438 KRTAP2-2Q9BYT5 123 aa6.88□□□□□ -1.31
HMGXB4-206ENST00000466438 KRTAP2-1Q9BYU5 128 aa6.88□□□□□ -1.31
HMGXB4-206ENST00000466438 GPR98Q8WXG9 6306 aa6.86□□□□□ -1.31
HMGXB4-206ENST00000466438 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
HMGXB4-206ENST00000466438 CHKB-CPT1BH3BT56 60 aa6.81□□□□□ -1.32
HMGXB4-206ENST00000466438 COA5Q86WW8 74 aa6.81□□□□□ -1.32
HMGXB4-206ENST00000466438 SPRR2EP22531 72 aa6.78□□□□□ -1.32
HMGXB4-206ENST00000466438 SPRR2BP35325 72 aa6.78□□□□□ -1.32
HMGXB4-206ENST00000466438 SPRR2AP35326 72 aa6.78□□□□□ -1.32
HMGXB4-206ENST00000466438 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
HMGXB4-206ENST00000466438 H1FX-AS1Q4G0G2 97 aa6.77□□□□□ -1.33
HMGXB4-206ENST00000466438 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
HMGXB4-206ENST00000466438 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
HMGXB4-206ENST00000466438 MT1BP07438 61 aa6.75□□□□□ -1.33
HMGXB4-206ENST00000466438 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
HMGXB4-206ENST00000466438 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
HMGXB4-206ENST00000466438 S4R3F8 94 aa6.72□□□□□ -1.33
HMGXB4-206ENST00000466438 Q5VV11 94 aa6.7□□□□□ -1.34
HMGXB4-206ENST00000466438 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
HMGXB4-206ENST00000466438 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
HMGXB4-206ENST00000466438 LCA10Q71F78 164 aa6.65□□□□□ -1.34
HMGXB4-206ENST00000466438 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
HMGXB4-206ENST00000466438 SMIM26A0A096LP01 95 aa6.64□□□□□ -1.35
HMGXB4-206ENST00000466438 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
HMGXB4-206ENST00000466438 V9GYY9 64 aa6.59□□□□□ -1.35
HMGXB4-206ENST00000466438 LCE1AQ5T7P2 110 aa6.58□□□□□ -1.36
HMGXB4-206ENST00000466438 CSAG1Q6PB30 78 aa6.58□□□□□ -1.36
HMGXB4-206ENST00000466438 SPRR2DP22532 72 aa6.56□□□□□ -1.36
HMGXB4-206ENST00000466438 Q1T7F1 81 aa6.53□□□□□ -1.36
HMGXB4-206ENST00000466438 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
HMGXB4-206ENST00000466438 SEC61GP60059 68 aa6.52□□□□□ -1.37
HMGXB4-206ENST00000466438 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
HMGXB4-206ENST00000466438 PRR15LQ9BU68 103 aa6.5□□□□□ -1.37
HMGXB4-206ENST00000466438 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
HMGXB4-206ENST00000466438 A0A1B0GU69 56 aa6.48□□□□□ -1.37
HMGXB4-206ENST00000466438 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
HMGXB4-206ENST00000466438 H0YAA0 97 aa6.44□□□□□ -1.38
HMGXB4-206ENST00000466438 KRTAP8-1Q8IUC2 63 aa6.41□□□□□ -1.38
HMGXB4-206ENST00000466438 PSPHP1O15172 72 aa6.39□□□□□ -1.39
HMGXB4-206ENST00000466438 KRTAP4-2Q9BYR5 136 aa6.38□□□□□ -1.39
HMGXB4-206ENST00000466438 ADM2Q7Z4H4 148 aa6.37□□□□□ -1.39
HMGXB4-206ENST00000466438 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
HMGXB4-206ENST00000466438 A0A1B0GU33 70 aa6.28□□□□□ -1.4
HMGXB4-206ENST00000466438 P0C880 135 aa6.28□□□□□ -1.4
HMGXB4-206ENST00000466438 UQCR11O14957 56 aa6.27□□□□□ -1.41
HMGXB4-206ENST00000466438 A6NED7 52 aa6.25□□□□□ -1.41
HMGXB4-206ENST00000466438 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
HMGXB4-206ENST00000466438 M0QZ58 72 aa6.21□□□□□ -1.42
HMGXB4-206ENST00000466438 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
HMGXB4-206ENST00000466438 R4GN34 69 aa6.2□□□□□ -1.42
HMGXB4-206ENST00000466438 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms