RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 Q8N9L7 120 aa4.28□□□□□ -1.72
RPUSD3-212ENST00000466141 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
RPUSD3-212ENST00000466141 Q6ZQY7 126 aa4.27□□□□□ -1.73
RPUSD3-212ENST00000466141 A0A1B0GU69 56 aa4.26□□□□□ -1.73
RPUSD3-212ENST00000466141 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
RPUSD3-212ENST00000466141 SPINK6Q6UWN8 80 aa4.26□□□□□ -1.73
RPUSD3-212ENST00000466141 IGLV7-43P04211 117 aa4.25□□□□□ -1.73
RPUSD3-212ENST00000466141 LORP23490 312 aaPredicted RBP4.25□□□□□ -1.73
RPUSD3-212ENST00000466141 LINC00472Q9H8W2 130 aa4.23□□□□□ -1.73
RPUSD3-212ENST00000466141 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
RPUSD3-212ENST00000466141 IGLV6-57P01721 117 aa4.21□□□□□ -1.74
RPUSD3-212ENST00000466141 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
RPUSD3-212ENST00000466141 HRES1P13985 223 aa4.2□□□□□ -1.74
RPUSD3-212ENST00000466141 SPRR1AP35321 89 aa4.2□□□□□ -1.74
RPUSD3-212ENST00000466141 A0A1B0GU33 70 aa4.19□□□□□ -1.74
RPUSD3-212ENST00000466141 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
RPUSD3-212ENST00000466141 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
RPUSD3-212ENST00000466141 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
RPUSD3-212ENST00000466141 PRLHP81277 87 aa4.17□□□□□ -1.74
RPUSD3-212ENST00000466141 DSCR10P59022 87 aa4.16□□□□□ -1.74
RPUSD3-212ENST00000466141 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
RPUSD3-212ENST00000466141 ACYP2P14621 99 aa4.15□□□□□ -1.75
RPUSD3-212ENST00000466141 TP53AIP1Q9HCN2 124 aa4.14□□□□□ -1.75
RPUSD3-212ENST00000466141 Q6ZRX8 168 aa4.13□□□□□ -1.75
RPUSD3-212ENST00000466141 Q96NJ1 140 aa4.13□□□□□ -1.75
RPUSD3-212ENST00000466141 KRTAP13-2Q52LG2 175 aa4.12□□□□□ -1.75
RPUSD3-212ENST00000466141 IGLV5-48A0A075B6I7 105 aa4.11□□□□□ -1.75
RPUSD3-212ENST00000466141 K7EQZ3 153 aa4.11□□□□□ -1.75
RPUSD3-212ENST00000466141 LINC00304Q8N9R0 145 aa4.11□□□□□ -1.75
RPUSD3-212ENST00000466141 ANAPC11Q9NYG5 84 aa4.11□□□□□ -1.75
RPUSD3-212ENST00000466141 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
RPUSD3-212ENST00000466141 DEFB116Q30KQ4 102 aa4.1□□□□□ -1.75
RPUSD3-212ENST00000466141 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
RPUSD3-212ENST00000466141 SPRR1BP22528 89 aa4.07□□□□□ -1.76
RPUSD3-212ENST00000466141 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
RPUSD3-212ENST00000466141 WFDC13Q8IUB5 93 aa4.05□□□□□ -1.76
RPUSD3-212ENST00000466141 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
RPUSD3-212ENST00000466141 PCOTHQ58A44 107 aa4.03□□□□□ -1.76
RPUSD3-212ENST00000466141 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
RPUSD3-212ENST00000466141 A0A0G2JQZ4 141 aa4.02□□□□□ -1.77
RPUSD3-212ENST00000466141 KRTAP4-1Q9BYQ7 146 aa3.99□□□□□ -1.77
RPUSD3-212ENST00000466141 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
RPUSD3-212ENST00000466141 SPINK1P00995 79 aa3.97□□□□□ -1.77
RPUSD3-212ENST00000466141 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
RPUSD3-212ENST00000466141 DEFB105AQ8NG35 78 aa3.96□□□□□ -1.78
RPUSD3-212ENST00000466141 R4GN34 69 aa3.92□□□□□ -1.78
RPUSD3-212ENST00000466141 KRTAP13-3Q3SY46 172 aa3.91□□□□□ -1.78
RPUSD3-212ENST00000466141 IGFL1Q6UW32 110 aa3.91□□□□□ -1.78
RPUSD3-212ENST00000466141 MT1HP80294 61 aa3.88□□□□□ -1.79
RPUSD3-212ENST00000466141 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
RPUSD3-212ENST00000466141 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
RPUSD3-212ENST00000466141 IGKV2-30P06310 120 aa3.87□□□□□ -1.79
RPUSD3-212ENST00000466141 MRPL34Q9BQ48 92 aaKnown RBP3.87□□□□□ -1.79
RPUSD3-212ENST00000466141 MMP24-AS1A0A0U1RRL7 71 aa3.86□□□□□ -1.79
RPUSD3-212ENST00000466141 PLAC4Q8WY50 150 aa3.86□□□□□ -1.79
RPUSD3-212ENST00000466141 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
RPUSD3-212ENST00000466141 XP32Q5T750 250 aa3.84□□□□□ -1.79
RPUSD3-212ENST00000466141 COX6B2Q6YFQ2 88 aa3.84□□□□□ -1.79
RPUSD3-212ENST00000466141 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
RPUSD3-212ENST00000466141 H0YAA0 97 aa3.81□□□□□ -1.8
RPUSD3-212ENST00000466141 INE1O15225 51 aa3.81□□□□□ -1.8
RPUSD3-212ENST00000466141 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
RPUSD3-212ENST00000466141 C9orf92A6NGG3 77 aa3.79□□□□□ -1.8
RPUSD3-212ENST00000466141 USH2AO75445 5202 aa3.77□□□□□ -1.81
RPUSD3-212ENST00000466141 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
RPUSD3-212ENST00000466141 M0R2T5 61 aa3.77□□□□□ -1.81
RPUSD3-212ENST00000466141 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
RPUSD3-212ENST00000466141 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
RPUSD3-212ENST00000466141 RPL37P61927 97 aaKnown RBP3.75□□□□□ -1.81
RPUSD3-212ENST00000466141 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
RPUSD3-212ENST00000466141 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
RPUSD3-212ENST00000466141 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
RPUSD3-212ENST00000466141 FLGP20930 4061 aaPredicted RBP3.71□□□□□ -1.81
RPUSD3-212ENST00000466141 KRTAP19-1Q8IUB9 90 aa3.65□□□□□ -1.83
RPUSD3-212ENST00000466141 KRTAP9-8Q9BYQ0 159 aa3.62□□□□□ -1.83
RPUSD3-212ENST00000466141 NEBP20929 6669 aa3.62□□□□□ -1.83
RPUSD3-212ENST00000466141 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
RPUSD3-212ENST00000466141 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
RPUSD3-212ENST00000466141 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
RPUSD3-212ENST00000466141 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
RPUSD3-212ENST00000466141 MT2AP02795 61 aa3.56□□□□□ -1.84
RPUSD3-212ENST00000466141 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
RPUSD3-212ENST00000466141 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
RPUSD3-212ENST00000466141 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
RPUSD3-212ENST00000466141 MT1FP04733 61 aa3.54□□□□□ -1.84
RPUSD3-212ENST00000466141 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
RPUSD3-212ENST00000466141 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
RPUSD3-212ENST00000466141 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
RPUSD3-212ENST00000466141 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
RPUSD3-212ENST00000466141 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
RPUSD3-212ENST00000466141 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
RPUSD3-212ENST00000466141 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
RPUSD3-212ENST00000466141 S4R3F8 94 aa3.41□□□□□ -1.86
RPUSD3-212ENST00000466141 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
RPUSD3-212ENST00000466141 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
RPUSD3-212ENST00000466141 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
RPUSD3-212ENST00000466141 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
RPUSD3-212ENST00000466141 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
RPUSD3-212ENST00000466141 KMT2DO14686 5537 aa3.32□□□□□ -1.88
RPUSD3-212ENST00000466141 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms