RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 Q8N9L7 120 aa2.16□□□□□ -2.06
GTF3C3-208ENST00000455546 BATFQ16520 125 aa2.15□□□□□ -2.07
GTF3C3-208ENST00000455546 HCG22E2RYF7 251 aa2.14□□□□□ -2.07
GTF3C3-208ENST00000455546 BPY2O14599 106 aa2.14□□□□□ -2.07
GTF3C3-208ENST00000455546 C5orf47Q569G3 176 aa2.14□□□□□ -2.07
GTF3C3-208ENST00000455546 CASC2Q6XLA1 102 aa2.13□□□□□ -2.07
GTF3C3-208ENST00000455546 C7orf65Q6ZTY9 151 aa2.13□□□□□ -2.07
GTF3C3-208ENST00000455546 FAM236AA0A1B0GUQ0 79 aa2.12□□□□□ -2.07
GTF3C3-208ENST00000455546 FAM236BA0A1B0GV22 79 aa2.12□□□□□ -2.07
GTF3C3-208ENST00000455546 TSTD3H0UI37 97 aa2.12□□□□□ -2.07
GTF3C3-208ENST00000455546 MT1BP07438 61 aa2.12□□□□□ -2.07
GTF3C3-208ENST00000455546 A6NN06 94 aa2.11□□□□□ -2.07
GTF3C3-208ENST00000455546 TAX1BP3O14907 124 aa2.11□□□□□ -2.07
GTF3C3-208ENST00000455546 A0A1W2PPM0 123 aa2.1□□□□□ -2.07
GTF3C3-208ENST00000455546 H3BT86 120 aa2.1□□□□□ -2.07
GTF3C3-208ENST00000455546 C1orf64Q8NEQ6 169 aa2.1□□□□□ -2.07
GTF3C3-208ENST00000455546 Q5VV11 94 aa2.09□□□□□ -2.07
GTF3C3-208ENST00000455546 CSAG1Q6PB30 78 aa2.09□□□□□ -2.07
GTF3C3-208ENST00000455546 LCA10Q71F78 164 aa2.09□□□□□ -2.07
GTF3C3-208ENST00000455546 S4R3F8 94 aa2.09□□□□□ -2.07
GTF3C3-208ENST00000455546 SMIM6P0DI80 62 aa2.08□□□□□ -2.08
GTF3C3-208ENST00000455546 KRTAP12-2P59991 146 aa2.08□□□□□ -2.08
GTF3C3-208ENST00000455546 KRTAP19-8Q3LI54 63 aa2.08□□□□□ -2.08
GTF3C3-208ENST00000455546 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
GTF3C3-208ENST00000455546 A0A087WVE0 104 aa2.07□□□□□ -2.08
GTF3C3-208ENST00000455546 SPCS1Q9Y6A9 102 aa2.07□□□□□ -2.08
GTF3C3-208ENST00000455546 KRTAP9-6A8MVA2 160 aa2.06□□□□□ -2.08
GTF3C3-208ENST00000455546 UBL5Q9BZL1 73 aa2.06□□□□□ -2.08
GTF3C3-208ENST00000455546 NEBP20929 6669 aa2.06□□□□□ -2.08
GTF3C3-208ENST00000455546 LOC105371267A0A1B0GV96 52 aa2.05□□□□□ -2.08
GTF3C3-208ENST00000455546 KLKP1Q107X0 134 aa2.05□□□□□ -2.08
GTF3C3-208ENST00000455546 PRO0461Q9UI25 63 aa2.05□□□□□ -2.08
GTF3C3-208ENST00000455546 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
GTF3C3-208ENST00000455546 CAMK2N1Q7Z7J9 78 aa2.04□□□□□ -2.08
GTF3C3-208ENST00000455546 IMUPQ9GZP8 106 aa2.04□□□□□ -2.08
GTF3C3-208ENST00000455546 CYP4F30PQ9H0H9 118 aa2.04□□□□□ -2.08
GTF3C3-208ENST00000455546 TP53AIP1Q9HCN2 124 aa2.03□□□□□ -2.08
GTF3C3-208ENST00000455546 MUC12Q9UKN1 5478 aa2.03□□□□□ -2.09
GTF3C3-208ENST00000455546 K7EP34 96 aa2.02□□□□□ -2.09
GTF3C3-208ENST00000455546 KRTAP5-9P26371 169 aa2.02□□□□□ -2.09
GTF3C3-208ENST00000455546 ETDBQ3ZM63 59 aa2□□□□□ -2.09
GTF3C3-208ENST00000455546 COL5A1-AS1Q5SY13 56 aa2□□□□□ -2.09
GTF3C3-208ENST00000455546 CRIPTQ9P021 101 aa1.99□□□□□ -2.09
GTF3C3-208ENST00000455546 TRAV22A0A0B4J277 110 aa1.98□□□□□ -2.09
GTF3C3-208ENST00000455546 NDUFC1O43677 76 aa1.98□□□□□ -2.09
GTF3C3-208ENST00000455546 ADM2Q7Z4H4 148 aa1.98□□□□□ -2.09
GTF3C3-208ENST00000455546 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
GTF3C3-208ENST00000455546 LOC101927531A0A1B0GV80 90 aa1.97□□□□□ -2.09
GTF3C3-208ENST00000455546 F8W1H4 67 aa1.97□□□□□ -2.09
GTF3C3-208ENST00000455546 KRTAP2-3P0C7H8 128 aa1.97□□□□□ -2.09
GTF3C3-208ENST00000455546 MT1XP80297 61 aa1.97□□□□□ -2.09
GTF3C3-208ENST00000455546 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
GTF3C3-208ENST00000455546 GTF2H5Q6ZYL4 71 aa1.97□□□□□ -2.09
GTF3C3-208ENST00000455546 KRTAP2-4Q9BYR9 128 aa1.97□□□□□ -2.09
GTF3C3-208ENST00000455546 H0Y9P7 68 aa1.96□□□□□ -2.1
GTF3C3-208ENST00000455546 SPRR2EP22531 72 aa1.96□□□□□ -2.1
GTF3C3-208ENST00000455546 SPRR2BP35325 72 aa1.96□□□□□ -2.1
GTF3C3-208ENST00000455546 SPRR2AP35326 72 aa1.96□□□□□ -2.1
GTF3C3-208ENST00000455546 HIST1H4AP62805 103 aaKnown RBP1.96□□□□□ -2.1
GTF3C3-208ENST00000455546 KMT2DO14686 5537 aa1.96□□□□□ -2.1
GTF3C3-208ENST00000455546 A8MUN3 132 aa1.95□□□□□ -2.1
GTF3C3-208ENST00000455546 H0YAA0 97 aa1.95□□□□□ -2.1
GTF3C3-208ENST00000455546 UQCRQO14949 82 aa1.95□□□□□ -2.1
GTF3C3-208ENST00000455546 ACYP1P07311 99 aa1.95□□□□□ -2.1
GTF3C3-208ENST00000455546 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
GTF3C3-208ENST00000455546 PLAC4Q8WY50 150 aa1.94□□□□□ -2.1
GTF3C3-208ENST00000455546 PRO2289Q9P1D8 64 aa1.94□□□□□ -2.1
GTF3C3-208ENST00000455546 P0C880 135 aa1.93□□□□□ -2.1
GTF3C3-208ENST00000455546 LINC00208Q96KT6 92 aa1.93□□□□□ -2.1
GTF3C3-208ENST00000455546 ATOX1O00244 68 aa1.92□□□□□ -2.1
GTF3C3-208ENST00000455546 M0QZ58 72 aa1.91□□□□□ -2.1
GTF3C3-208ENST00000455546 LINC01554Q52M75 96 aa1.91□□□□□ -2.1
GTF3C3-208ENST00000455546 R4GN34 69 aa1.91□□□□□ -2.1
GTF3C3-208ENST00000455546 SPRR2DP22532 72 aa1.9□□□□□ -2.11
GTF3C3-208ENST00000455546 ATP5EP2Q5VTU8 51 aa1.9□□□□□ -2.11
GTF3C3-208ENST00000455546 KRTAP2-1Q9BYU5 128 aa1.9□□□□□ -2.11
GTF3C3-208ENST00000455546 SMIM26A0A096LP01 95 aa1.89□□□□□ -2.11
GTF3C3-208ENST00000455546 FAM240AA0A1B0GVK7 77 aa1.89□□□□□ -2.11
GTF3C3-208ENST00000455546 MP68P56378 58 aa1.88□□□□□ -2.11
GTF3C3-208ENST00000455546 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
GTF3C3-208ENST00000455546 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
GTF3C3-208ENST00000455546 C20orf197Q8N268 126 aa1.86□□□□□ -2.11
GTF3C3-208ENST00000455546 DMAC1Q96GE9 116 aa1.86□□□□□ -2.11
GTF3C3-208ENST00000455546 SCGB1A1P11684 91 aa1.84□□□□□ -2.11
GTF3C3-208ENST00000455546 A0A1B0GV90 55 aa1.83□□□□□ -2.12
GTF3C3-208ENST00000455546 H3BPC8 53 aa1.82□□□□□ -2.12
GTF3C3-208ENST00000455546 MT-ATP8P03928 68 aa1.82□□□□□ -2.12
GTF3C3-208ENST00000455546 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
GTF3C3-208ENST00000455546 ACYP2P14621 99 aa1.81□□□□□ -2.12
GTF3C3-208ENST00000455546 TRAV7A0A075B6U4 112 aa1.8□□□□□ -2.12
GTF3C3-208ENST00000455546 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
GTF3C3-208ENST00000455546 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
GTF3C3-208ENST00000455546 CHKB-CPT1BH3BT56 60 aa1.77□□□□□ -2.13
GTF3C3-208ENST00000455546 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
GTF3C3-208ENST00000455546 SPTSSBQ8NFR3 76 aa1.77□□□□□ -2.13
GTF3C3-208ENST00000455546 J3QR89 54 aa1.76□□□□□ -2.13
GTF3C3-208ENST00000455546 SNURFQ9Y675 71 aa1.76□□□□□ -2.13
GTF3C3-208ENST00000455546 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
GTF3C3-208ENST00000455546 MT1EP04732 61 aa1.74□□□□□ -2.13
GTF3C3-208ENST00000455546 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms