RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
LTBR-204ENST00000444814 K7ERS5 55 aa6.56□□□□□ -1.36
LTBR-204ENST00000444814 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
LTBR-204ENST00000444814 TRAV7A0A075B6U4 112 aa6.55□□□□□ -1.36
LTBR-204ENST00000444814 LUZP6Q538Z0 58 aa6.55□□□□□ -1.36
LTBR-204ENST00000444814 HCG22E2RYF7 251 aa6.54□□□□□ -1.36
LTBR-204ENST00000444814 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
LTBR-204ENST00000444814 A8MUU9 505 aa6.53□□□□□ -1.36
LTBR-204ENST00000444814 A8MWP4 228 aa6.52□□□□□ -1.36
LTBR-204ENST00000444814 ADM2Q7Z4H4 148 aa6.52□□□□□ -1.36
LTBR-204ENST00000444814 KRTAP9-8Q9BYQ0 159 aa6.52□□□□□ -1.36
LTBR-204ENST00000444814 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
LTBR-204ENST00000444814 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
LTBR-204ENST00000444814 LINC00846Q9NV44 126 aa6.51□□□□□ -1.37
LTBR-204ENST00000444814 A6NED7 52 aa6.5□□□□□ -1.37
LTBR-204ENST00000444814 TRAV22A0A0B4J277 110 aa6.48□□□□□ -1.37
LTBR-204ENST00000444814 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
LTBR-204ENST00000444814 BPY2O14599 106 aa6.48□□□□□ -1.37
LTBR-204ENST00000444814 KRTAP4-1Q9BYQ7 146 aa6.48□□□□□ -1.37
LTBR-204ENST00000444814 UBL5Q9BZL1 73 aa6.48□□□□□ -1.37
LTBR-204ENST00000444814 ATP5EP2Q5VTU8 51 aa6.47□□□□□ -1.37
LTBR-204ENST00000444814 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
LTBR-204ENST00000444814 ROMO1P60602 79 aa6.46□□□□□ -1.38
LTBR-204ENST00000444814 COX6B2Q6YFQ2 88 aa6.45□□□□□ -1.38
LTBR-204ENST00000444814 IGKV3D-7A0A0C4DH55 119 aa6.44□□□□□ -1.38
LTBR-204ENST00000444814 Q5VV11 94 aa6.43□□□□□ -1.38
LTBR-204ENST00000444814 CASC2Q6XLA1 102 aa6.43□□□□□ -1.38
LTBR-204ENST00000444814 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
LTBR-204ENST00000444814 TMEM254Q8TBM7 123 aa6.4□□□□□ -1.38
LTBR-204ENST00000444814 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.39
LTBR-204ENST00000444814 ZCCHC13Q8WW36 166 aaKnown RBP6.39□□□□□ -1.39
LTBR-204ENST00000444814 K7EQZ3 153 aa6.38□□□□□ -1.39
LTBR-204ENST00000444814 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
LTBR-204ENST00000444814 MUC2Q02817 5179 aa6.37□□□□□ -1.39
LTBR-204ENST00000444814 C1orf64Q8NEQ6 169 aa6.36□□□□□ -1.39
LTBR-204ENST00000444814 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
LTBR-204ENST00000444814 M0R2T5 61 aa6.31□□□□□ -1.4
LTBR-204ENST00000444814 A8MU10 97 aa6.3□□□□□ -1.4
LTBR-204ENST00000444814 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
LTBR-204ENST00000444814 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
LTBR-204ENST00000444814 SPINK7P58062 85 aa6.28□□□□□ -1.4
LTBR-204ENST00000444814 Q8N9L7 120 aa6.28□□□□□ -1.4
LTBR-204ENST00000444814 A0A087WVE0 104 aa6.27□□□□□ -1.41
LTBR-204ENST00000444814 FAT4Q6V0I7 4981 aa6.27□□□□□ -1.41
LTBR-204ENST00000444814 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
LTBR-204ENST00000444814 MT1HP80294 61 aa6.27□□□□□ -1.41
LTBR-204ENST00000444814 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
LTBR-204ENST00000444814 SNURFQ9Y675 71 aa6.26□□□□□ -1.41
LTBR-204ENST00000444814 HRES1P13985 223 aa6.23□□□□□ -1.41
LTBR-204ENST00000444814 TP53AIP1Q9HCN2 124 aa6.23□□□□□ -1.41
LTBR-204ENST00000444814 H3BPC8 53 aa6.22□□□□□ -1.41
LTBR-204ENST00000444814 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
LTBR-204ENST00000444814 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
LTBR-204ENST00000444814 PRR15LQ9BU68 103 aa6.17□□□□□ -1.42
LTBR-204ENST00000444814 P0C880 135 aa6.14□□□□□ -1.43
LTBR-204ENST00000444814 KRTAP10-6P60371 365 aaPredicted RBP6.13□□□□□ -1.43
LTBR-204ENST00000444814 Q5W150 140 aa6.13□□□□□ -1.43
LTBR-204ENST00000444814 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
LTBR-204ENST00000444814 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
LTBR-204ENST00000444814 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
LTBR-204ENST00000444814 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
LTBR-204ENST00000444814 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
LTBR-204ENST00000444814 H0Y9P7 68 aa5.98□□□□□ -1.45
LTBR-204ENST00000444814 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
LTBR-204ENST00000444814 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
LTBR-204ENST00000444814 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
LTBR-204ENST00000444814 LINC00208Q96KT6 92 aa5.92□□□□□ -1.46
LTBR-204ENST00000444814 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
LTBR-204ENST00000444814 S4R3F8 94 aa5.91□□□□□ -1.46
LTBR-204ENST00000444814 A0A1B0GU33 70 aa5.89□□□□□ -1.47
LTBR-204ENST00000444814 MT2AP02795 61 aa5.88□□□□□ -1.47
LTBR-204ENST00000444814 MT1FP04733 61 aa5.82□□□□□ -1.48
LTBR-204ENST00000444814 KRTAP3-1Q9BYR8 98 aa5.82□□□□□ -1.48
LTBR-204ENST00000444814 UQCR11O14957 56 aa5.81□□□□□ -1.48
LTBR-204ENST00000444814 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
LTBR-204ENST00000444814 SPATA8Q6RVD6 105 aa5.76□□□□□ -1.49
LTBR-204ENST00000444814 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
LTBR-204ENST00000444814 SPINT4Q6UDR6 99 aa5.67□□□□□ -1.5
LTBR-204ENST00000444814 ACYP2P14621 99 aa5.65□□□□□ -1.5
LTBR-204ENST00000444814 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
LTBR-204ENST00000444814 H0YAA0 97 aa5.64□□□□□ -1.51
LTBR-204ENST00000444814 COA5Q86WW8 74 aa5.63□□□□□ -1.51
LTBR-204ENST00000444814 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
LTBR-204ENST00000444814 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
LTBR-204ENST00000444814 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
LTBR-204ENST00000444814 R4GN34 69 aa5.54□□□□□ -1.52
LTBR-204ENST00000444814 A0A1B0GU69 56 aa5.5□□□□□ -1.53
LTBR-204ENST00000444814 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
LTBR-204ENST00000444814 KRTAP19-8Q3LI54 63 aa5.46□□□□□ -1.53
LTBR-204ENST00000444814 USH2AO75445 5202 aa5.46□□□□□ -1.54
LTBR-204ENST00000444814 M0QZ58 72 aa5.39□□□□□ -1.55
LTBR-204ENST00000444814 MT1BP07438 61 aa5.38□□□□□ -1.55
LTBR-204ENST00000444814 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
LTBR-204ENST00000444814 SSPOA2VEC9 5147 aa5.36□□□□□ -1.55
LTBR-204ENST00000444814 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
LTBR-204ENST00000444814 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
LTBR-204ENST00000444814 INE1O15225 51 aa5.19□□□□□ -1.58
LTBR-204ENST00000444814 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
LTBR-204ENST00000444814 MT1XP80297 61 aa5.1□□□□□ -1.59
LTBR-204ENST00000444814 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms