RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PRR15Q8IV56 129 aa2.57□□□□□ -2
PTPN4-206ENST00000441089 IGHV6-1A0A0B4J1U7 121 aa2.56□□□□□ -2
PTPN4-206ENST00000441089 KRTAP16-1A8MUX0 517 aa2.56□□□□□ -2
PTPN4-206ENST00000441089 COX6B2Q6YFQ2 88 aa2.56□□□□□ -2
PTPN4-206ENST00000441089 C8orf17Q9NRJ1 99 aa2.56□□□□□ -2
PTPN4-206ENST00000441089 HIST1H4AP62805 103 aaKnown RBP2.55□□□□□ -2
PTPN4-206ENST00000441089 C9orf92A6NGG3 77 aa2.54□□□□□ -2
PTPN4-206ENST00000441089 HCG22E2RYF7 251 aa2.54□□□□□ -2
PTPN4-206ENST00000441089 C8orf87E5RJ46 101 aa2.54□□□□□ -2
PTPN4-206ENST00000441089 NDUFB1O75438 58 aa2.54□□□□□ -2
PTPN4-206ENST00000441089 WFDC13Q8IUB5 93 aa2.54□□□□□ -2
PTPN4-206ENST00000441089 LINC00313P59037 77 aa2.53□□□□□ -2
PTPN4-206ENST00000441089 IMUPQ9GZP8 106 aa2.53□□□□□ -2
PTPN4-206ENST00000441089 hDV103S1A0JD37 113 aa2.52□□□□□ -2.01
PTPN4-206ENST00000441089 CASC2Q6XLA1 102 aa2.52□□□□□ -2.01
PTPN4-206ENST00000441089 MRPL34Q9BQ48 92 aaKnown RBP2.52□□□□□ -2.01
PTPN4-206ENST00000441089 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
PTPN4-206ENST00000441089 FAM236AA0A1B0GUQ0 79 aa2.51□□□□□ -2.01
PTPN4-206ENST00000441089 FAM236BA0A1B0GV22 79 aa2.51□□□□□ -2.01
PTPN4-206ENST00000441089 TMEM254Q8TBM7 123 aa2.51□□□□□ -2.01
PTPN4-206ENST00000441089 A8MUU9 505 aa2.5□□□□□ -2.01
PTPN4-206ENST00000441089 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
PTPN4-206ENST00000441089 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
PTPN4-206ENST00000441089 C20orf166-AS1Q96NR2 134 aa2.5□□□□□ -2.01
PTPN4-206ENST00000441089 PCOTHQ58A44 107 aa2.49□□□□□ -2.01
PTPN4-206ENST00000441089 Q75L30 129 aa2.49□□□□□ -2.01
PTPN4-206ENST00000441089 OCR1Q9BZK8 76 aa2.49□□□□□ -2.01
PTPN4-206ENST00000441089 RPL37P61927 97 aaKnown RBP2.48□□□□□ -2.01
PTPN4-206ENST00000441089 Q5W150 140 aa2.48□□□□□ -2.01
PTPN4-206ENST00000441089 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
PTPN4-206ENST00000441089 NDUFS5O43920 106 aa2.47□□□□□ -2.01
PTPN4-206ENST00000441089 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
PTPN4-206ENST00000441089 SCGB1A1P11684 91 aa2.47□□□□□ -2.01
PTPN4-206ENST00000441089 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
PTPN4-206ENST00000441089 KMT2DO14686 5537 aa2.47□□□□□ -2.01
PTPN4-206ENST00000441089 ATOX1O00244 68 aa2.46□□□□□ -2.02
PTPN4-206ENST00000441089 UQCRQO14949 82 aa2.45□□□□□ -2.02
PTPN4-206ENST00000441089 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
PTPN4-206ENST00000441089 TP53AIP1Q9HCN2 124 aa2.45□□□□□ -2.02
PTPN4-206ENST00000441089 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
PTPN4-206ENST00000441089 TRAV7A0A075B6U4 112 aa2.44□□□□□ -2.02
PTPN4-206ENST00000441089 TRAV22A0A0B4J277 110 aa2.44□□□□□ -2.02
PTPN4-206ENST00000441089 SERP2Q8N6R1 65 aa2.44□□□□□ -2.02
PTPN4-206ENST00000441089 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
PTPN4-206ENST00000441089 H0Y9P7 68 aa2.43□□□□□ -2.02
PTPN4-206ENST00000441089 SMIM20Q8N5G0 67 aa2.43□□□□□ -2.02
PTPN4-206ENST00000441089 ANAPC13Q9BS18 74 aa2.43□□□□□ -2.02
PTPN4-206ENST00000441089 COX7CP15954 63 aa2.42□□□□□ -2.02
PTPN4-206ENST00000441089 C5orf47Q569G3 176 aa2.42□□□□□ -2.02
PTPN4-206ENST00000441089 ATP11AUNQ6ZP68 121 aa2.42□□□□□ -2.02
PTPN4-206ENST00000441089 CYSTM1Q9H1C7 97 aa2.42□□□□□ -2.02
PTPN4-206ENST00000441089 CCDC179H3BU77 68 aa2.41□□□□□ -2.02
PTPN4-206ENST00000441089 MT2AP02795 61 aa2.41□□□□□ -2.02
PTPN4-206ENST00000441089 LINC00208Q96KT6 92 aa2.41□□□□□ -2.02
PTPN4-206ENST00000441089 SPINK7P58062 85 aa2.4□□□□□ -2.03
PTPN4-206ENST00000441089 KLKP1Q107X0 134 aa2.4□□□□□ -2.03
PTPN4-206ENST00000441089 C20orf197Q8N268 126 aa2.4□□□□□ -2.03
PTPN4-206ENST00000441089 C1orf64Q8NEQ6 169 aa2.4□□□□□ -2.03
PTPN4-206ENST00000441089 SNURFQ9Y675 71 aa2.4□□□□□ -2.03
PTPN4-206ENST00000441089 LOC101927531A0A1B0GV80 90 aa2.39□□□□□ -2.03
PTPN4-206ENST00000441089 H3BPC8 53 aa2.39□□□□□ -2.03
PTPN4-206ENST00000441089 HRES1P13985 223 aa2.39□□□□□ -2.03
PTPN4-206ENST00000441089 MP68P56378 58 aa2.39□□□□□ -2.03
PTPN4-206ENST00000441089 KRTAP10-10P60014 251 aa2.39□□□□□ -2.03
PTPN4-206ENST00000441089 C7orf65Q6ZTY9 151 aa2.39□□□□□ -2.03
PTPN4-206ENST00000441089 CYP4F30PQ9H0H9 118 aa2.39□□□□□ -2.03
PTPN4-206ENST00000441089 KRTAP12-2P59991 146 aa2.38□□□□□ -2.03
PTPN4-206ENST00000441089 MT1FP04733 61 aa2.37□□□□□ -2.03
PTPN4-206ENST00000441089 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
PTPN4-206ENST00000441089 H7BZZ5 65 aa2.36□□□□□ -2.03
PTPN4-206ENST00000441089 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
PTPN4-206ENST00000441089 C4orf26Q17RF5 130 aa2.35□□□□□ -2.03
PTPN4-206ENST00000441089 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
PTPN4-206ENST00000441089 NDUFC1O43677 76 aa2.31□□□□□ -2.04
PTPN4-206ENST00000441089 SPANXA2-OT1Q8N9U9 137 aa2.31□□□□□ -2.04
PTPN4-206ENST00000441089 DMAC1Q96GE9 116 aa2.31□□□□□ -2.04
PTPN4-206ENST00000441089 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
PTPN4-206ENST00000441089 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
PTPN4-206ENST00000441089 RBM12B-AS1Q9P1G2 102 aa2.3□□□□□ -2.04
PTPN4-206ENST00000441089 FAM236DA0A1B0GTK5 79 aa2.29□□□□□ -2.04
PTPN4-206ENST00000441089 FAM236CP0DP71 79 aa2.29□□□□□ -2.04
PTPN4-206ENST00000441089 TMEM258P61165 79 aa2.29□□□□□ -2.04
PTPN4-206ENST00000441089 A8MUN3 132 aa2.28□□□□□ -2.04
PTPN4-206ENST00000441089 H1FX-AS1Q4G0G2 97 aa2.28□□□□□ -2.04
PTPN4-206ENST00000441089 A6NN06 94 aa2.26□□□□□ -2.05
PTPN4-206ENST00000441089 ACYP2P14621 99 aa2.26□□□□□ -2.05
PTPN4-206ENST00000441089 LCA10Q71F78 164 aa2.26□□□□□ -2.05
PTPN4-206ENST00000441089 COA5Q86WW8 74 aa2.26□□□□□ -2.05
PTPN4-206ENST00000441089 A8MU10 97 aa2.25□□□□□ -2.05
PTPN4-206ENST00000441089 SPRR2EP22531 72 aa2.25□□□□□ -2.05
PTPN4-206ENST00000441089 SPRR2BP35325 72 aa2.25□□□□□ -2.05
PTPN4-206ENST00000441089 SPRR2AP35326 72 aa2.25□□□□□ -2.05
PTPN4-206ENST00000441089 ATP5EP56381 51 aaPredicted RBP2.25□□□□□ -2.05
PTPN4-206ENST00000441089 S4R3F8 94 aa2.25□□□□□ -2.05
PTPN4-206ENST00000441089 SERP1Q9Y6X1 66 aa2.22□□□□□ -2.05
PTPN4-206ENST00000441089 CHKB-CPT1BH3BT56 60 aa2.21□□□□□ -2.06
PTPN4-206ENST00000441089 CSAG1Q6PB30 78 aa2.19□□□□□ -2.06
PTPN4-206ENST00000441089 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
PTPN4-206ENST00000441089 SPRR2DP22532 72 aa2.18□□□□□ -2.06
PTPN4-206ENST00000441089 RPS28P62857 69 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms