RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
SMARCAD1-203ENST00000394961 HCG22E2RYF7 251 aa2.73□□□□□ -1.97
SMARCAD1-203ENST00000394961 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
SMARCAD1-203ENST00000394961 IGKV2D-30A0A075B6S6 120 aa2.73□□□□□ -1.97
SMARCAD1-203ENST00000394961 NAA38Q9BRA0 125 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-203ENST00000394961 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
SMARCAD1-203ENST00000394961 LCA10Q71F78 164 aa2.72□□□□□ -1.97
SMARCAD1-203ENST00000394961 A0A1W2PPM0 123 aa2.71□□□□□ -1.98
SMARCAD1-203ENST00000394961 C1orf64Q8NEQ6 169 aa2.71□□□□□ -1.98
SMARCAD1-203ENST00000394961 TSTD3H0UI37 97 aa2.71□□□□□ -1.98
SMARCAD1-203ENST00000394961 NDUFS5O43920 106 aa2.71□□□□□ -1.98
SMARCAD1-203ENST00000394961 IMUPQ9GZP8 106 aa2.71□□□□□ -1.98
SMARCAD1-203ENST00000394961 C4orf26Q17RF5 130 aa2.7□□□□□ -1.98
SMARCAD1-203ENST00000394961 TAX1BP3O14907 124 aa2.7□□□□□ -1.98
SMARCAD1-203ENST00000394961 V9GYY9 64 aa2.68□□□□□ -1.98
SMARCAD1-203ENST00000394961 FAM236AA0A1B0GUQ0 79 aa2.67□□□□□ -1.98
SMARCAD1-203ENST00000394961 FAM236BA0A1B0GV22 79 aa2.67□□□□□ -1.98
SMARCAD1-203ENST00000394961 UBL5Q9BZL1 73 aa2.67□□□□□ -1.98
SMARCAD1-203ENST00000394961 PRO0461Q9UI25 63 aa2.67□□□□□ -1.98
SMARCAD1-203ENST00000394961 A8MUN3 132 aa2.67□□□□□ -1.98
SMARCAD1-203ENST00000394961 LOC101927531A0A1B0GV80 90 aa2.67□□□□□ -1.98
SMARCAD1-203ENST00000394961 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SMARCAD1-203ENST00000394961 CYP4F30PQ9H0H9 118 aa2.66□□□□□ -1.98
SMARCAD1-203ENST00000394961 SMIM20Q8N5G0 67 aa2.66□□□□□ -1.98
SMARCAD1-203ENST00000394961 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
SMARCAD1-203ENST00000394961 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.99
SMARCAD1-203ENST00000394961 MT1XP80297 61 aa2.64□□□□□ -1.99
SMARCAD1-203ENST00000394961 K7ERU9 68 aa2.63□□□□□ -1.99
SMARCAD1-203ENST00000394961 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
SMARCAD1-203ENST00000394961 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
SMARCAD1-203ENST00000394961 Q8N9L7 120 aa2.63□□□□□ -1.99
SMARCAD1-203ENST00000394961 ATOX1O00244 68 aa2.62□□□□□ -1.99
SMARCAD1-203ENST00000394961 ATP5EP2Q5VTU8 51 aa2.62□□□□□ -1.99
SMARCAD1-203ENST00000394961 TRAV22A0A0B4J277 110 aa2.62□□□□□ -1.99
SMARCAD1-203ENST00000394961 UQCRQO14949 82 aa2.61□□□□□ -1.99
SMARCAD1-203ENST00000394961 COL5A1-AS1Q5SY13 56 aa2.61□□□□□ -1.99
SMARCAD1-203ENST00000394961 SPCS1Q9Y6A9 102 aa2.61□□□□□ -1.99
SMARCAD1-203ENST00000394961 K7EP34 96 aa2.61□□□□□ -1.99
SMARCAD1-203ENST00000394961 H3BS24 57 aa2.6□□□□□ -1.99
SMARCAD1-203ENST00000394961 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
SMARCAD1-203ENST00000394961 FAM240AA0A1B0GVK7 77 aa2.59□□□□□ -1.99
SMARCAD1-203ENST00000394961 ACYP1P07311 99 aa2.59□□□□□ -1.99
SMARCAD1-203ENST00000394961 SPRR2EP22531 72 aa2.59□□□□□ -1.99
SMARCAD1-203ENST00000394961 SPRR2BP35325 72 aa2.59□□□□□ -1.99
SMARCAD1-203ENST00000394961 SPRR2AP35326 72 aa2.59□□□□□ -1.99
SMARCAD1-203ENST00000394961 F8W1H4 67 aa2.58□□□□□ -2
SMARCAD1-203ENST00000394961 NDUFC1O43677 76 aa2.58□□□□□ -2
SMARCAD1-203ENST00000394961 A0A0A0MQY5 61 aa2.58□□□□□ -2
SMARCAD1-203ENST00000394961 KRTAP10-12P60413 245 aa2.58□□□□□ -2
SMARCAD1-203ENST00000394961 C20orf197Q8N268 126 aa2.58□□□□□ -2
SMARCAD1-203ENST00000394961 MUC12Q9UKN1 5478 aa2.57□□□□□ -2
SMARCAD1-203ENST00000394961 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
SMARCAD1-203ENST00000394961 A0A087WVE0 104 aa2.56□□□□□ -2
SMARCAD1-203ENST00000394961 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
SMARCAD1-203ENST00000394961 H3BPC8 53 aa2.55□□□□□ -2
SMARCAD1-203ENST00000394961 KMT2DO14686 5537 aa2.55□□□□□ -2
SMARCAD1-203ENST00000394961 PLAC4Q8WY50 150 aa2.54□□□□□ -2
SMARCAD1-203ENST00000394961 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
SMARCAD1-203ENST00000394961 GTF2H5Q6ZYL4 71 aa2.54□□□□□ -2
SMARCAD1-203ENST00000394961 BATFQ16520 125 aa2.54□□□□□ -2
SMARCAD1-203ENST00000394961 ADM2Q7Z4H4 148 aa2.53□□□□□ -2
SMARCAD1-203ENST00000394961 CCDC179H3BU77 68 aa2.53□□□□□ -2.01
SMARCAD1-203ENST00000394961 SPRR2DP22532 72 aa2.52□□□□□ -2.01
SMARCAD1-203ENST00000394961 H0Y9P7 68 aa2.52□□□□□ -2.01
SMARCAD1-203ENST00000394961 HIST1H4AP62805 103 aaKnown RBP2.51□□□□□ -2.01
SMARCAD1-203ENST00000394961 DMAC1Q96GE9 116 aa2.51□□□□□ -2.01
SMARCAD1-203ENST00000394961 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
SMARCAD1-203ENST00000394961 OCR1Q9BZK8 76 aa2.49□□□□□ -2.01
SMARCAD1-203ENST00000394961 TRAV7A0A075B6U4 112 aa2.47□□□□□ -2.01
SMARCAD1-203ENST00000394961 LINC00643Q86TS7 51 aa2.47□□□□□ -2.01
SMARCAD1-203ENST00000394961 R4GN34 69 aa2.47□□□□□ -2.01
SMARCAD1-203ENST00000394961 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
SMARCAD1-203ENST00000394961 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
SMARCAD1-203ENST00000394961 ETDBQ3ZM63 59 aa2.46□□□□□ -2.02
SMARCAD1-203ENST00000394961 P0C880 135 aa2.45□□□□□ -2.02
SMARCAD1-203ENST00000394961 TMEM258P61165 79 aa2.45□□□□□ -2.02
SMARCAD1-203ENST00000394961 MT-ATP8P03928 68 aa2.45□□□□□ -2.02
SMARCAD1-203ENST00000394961 MP68P56378 58 aa2.45□□□□□ -2.02
SMARCAD1-203ENST00000394961 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
SMARCAD1-203ENST00000394961 ANAPC13Q9BS18 74 aa2.45□□□□□ -2.02
SMARCAD1-203ENST00000394961 M0QZ58 72 aa2.44□□□□□ -2.02
SMARCAD1-203ENST00000394961 LCE5AQ5TCM9 118 aa2.42□□□□□ -2.02
SMARCAD1-203ENST00000394961 LINC00208Q96KT6 92 aa2.42□□□□□ -2.02
SMARCAD1-203ENST00000394961 KTN1-AS1Q86SY8 53 aa2.41□□□□□ -2.02
SMARCAD1-203ENST00000394961 SPTSSBQ8NFR3 76 aa2.41□□□□□ -2.02
SMARCAD1-203ENST00000394961 CYSTM1Q9H1C7 97 aa2.4□□□□□ -2.03
SMARCAD1-203ENST00000394961 PSPHP1O15172 72 aa2.38□□□□□ -2.03
SMARCAD1-203ENST00000394961 ACYP2P14621 99 aa2.37□□□□□ -2.03
SMARCAD1-203ENST00000394961 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
SMARCAD1-203ENST00000394961 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
SMARCAD1-203ENST00000394961 LCE4AQ5TA78 99 aa2.36□□□□□ -2.03
SMARCAD1-203ENST00000394961 MT1EP04732 61 aa2.36□□□□□ -2.03
SMARCAD1-203ENST00000394961 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
SMARCAD1-203ENST00000394961 COX7CP15954 63 aa2.35□□□□□ -2.03
SMARCAD1-203ENST00000394961 SMIM26A0A096LP01 95 aa2.35□□□□□ -2.03
SMARCAD1-203ENST00000394961 J3QR89 54 aa2.34□□□□□ -2.04
SMARCAD1-203ENST00000394961 SPANXA2-OT1Q8N9U9 137 aa2.33□□□□□ -2.04
SMARCAD1-203ENST00000394961 KRTAP19-4Q3LI73 84 aa2.33□□□□□ -2.04
SMARCAD1-203ENST00000394961 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
SMARCAD1-203ENST00000394961 Q1T7F1 81 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms