RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Col5a3Q9JLI2 1739 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 P04940 107 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 P04941 107 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 Nup210Q9QY81 1886 aaKnown RBP13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 Tex26Q0VB26 296 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 Chac1Q8R3J5 223 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 Cep250Q60952 2414 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 Olfr984Q8VFN1 314 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 Gm6040Q4QY32 63 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 CstadQ9D245 104 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 4933414I15RikQ9D4D5 133 aa13.29□□□□□ -0.28
Usp47-201ENSMUST00000106653 Tex54G3UW99 86 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Tm4sf20Q9CQY8 226 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Pcnx1Q9QYC1 2344 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Nckap5E9QAE1 1909 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Plxnb3Q9QY40 1902 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Ighv8-4A0A0A6YW26 117 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 8030423J24RikQ9CX45 142 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Cend1Q9JKC6 149 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Dock7Q8R1A4 2130 aaKnown RBP13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Bcl6bO88282 474 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Pgpep1Q9ESW8 209 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Hist2h2beQ64524 126 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Gm9961Q8BNV2 113 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Tnfrsf13bQ9ET35 249 aa13.28□□□□□ -0.28
Usp47-201ENSMUST00000106653 Tcl1b4P56844 120 aa13.27□□□□□ -0.28
Usp47-201ENSMUST00000106653 Ang5Q5GAN1 145 aa13.27□□□□□ -0.28
Usp47-201ENSMUST00000106653 C730034F03RikQ8BGL5 111 aa13.27□□□□□ -0.28
Usp47-201ENSMUST00000106653 Q8C708 225 aa13.27□□□□□ -0.28
Usp47-201ENSMUST00000106653 Tex48Q9DA81 110 aa13.27□□□□□ -0.28
Usp47-201ENSMUST00000106653 Sptbn1Q62261 2363 aaKnown RBP13.27□□□□□ -0.29
Usp47-201ENSMUST00000106653 Tnrc6aQ3UHK8 1896 aaKnown RBP13.27□□□□□ -0.29
Usp47-201ENSMUST00000106653 Ighv1-4A0A075B5T4 117 aa13.27□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm17677B3GLJ5 116 aa13.27□□□□□ -0.29
Usp47-201ENSMUST00000106653 Znf664Q4VA44 261 aa13.27□□□□□ -0.29
Usp47-201ENSMUST00000106653 Ighv1-74A0A0G2JGK2 117 aa13.27□□□□□ -0.29
Usp47-201ENSMUST00000106653 Wfdc9Q3UW41 83 aa13.27□□□□□ -0.29
Usp47-201ENSMUST00000106653 Fam208bQ5DTT3 2382 aa13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Trip12G5E870 2025 aaKnown RBP13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Vmo1Q5SXG7 201 aa13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Armcx4E9PWM3 2356 aa13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm5294J3QP53 216 aa13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Sslp1Q3UN54 99 aa13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Ighv5-9-1A0A0A6YVS4 126 aa13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Pla2g2aP31482 146 aa13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Rs1Q9Z1L4 224 aa13.26□□□□□ -0.29
Usp47-201ENSMUST00000106653 Plxnb1Q8CJH3 2119 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Smim10l1A0A087WNQ7 89 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Znf787Q8BIF9 381 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm20379A0A087WR34 119 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Hbb-bsA8DUK4 147 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Hbb-b1P02088 147 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Zfp407G3UVV3 2246 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 1500009C09RikD3YYW9 81 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 P01786 117 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Wipf2Q6PEV3 440 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Fam110dQ80X91 271 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Ly86O88188 162 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 MturnQ8CGA4 131 aa13.25□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm28038F7BCN9 126 aa13.24□□□□□ -0.29
Usp47-201ENSMUST00000106653 9130213A22RikQ3V3T2 120 aa13.24□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm17324Q8C6J8 137 aa13.24□□□□□ -0.29
Usp47-201ENSMUST00000106653 Akap6E9Q9K8 2307 aa13.24□□□□□ -0.29
Usp47-201ENSMUST00000106653 P01811 117 aa13.24□□□□□ -0.29
Usp47-201ENSMUST00000106653 Hint1P70349 126 aaKnown RBP13.24□□□□□ -0.29
Usp47-201ENSMUST00000106653 Col6a6Q8C6K9 2265 aa13.24□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm20708H3BKF4 155 aa13.24□□□□□ -0.29
Usp47-201ENSMUST00000106653 Tmem86bQ497J1 226 aa13.23□□□□□ -0.29
Usp47-201ENSMUST00000106653 5730522E02RikQ5SP45 163 aa13.23□□□□□ -0.29
Usp47-201ENSMUST00000106653 Tcf20Q9EPQ8 1987 aa13.23□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm21994F6T2D2 329 aa13.23□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm20517G3UVU6 152 aa13.23□□□□□ -0.29
Usp47-201ENSMUST00000106653 Cd69P37217 199 aa13.23□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm12169F2Z474 250 aa13.23□□□□□ -0.29
Usp47-201ENSMUST00000106653 Synj2bpQ9D6K5 145 aa13.23□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm5129F6YHA9 99 aa13.22□□□□□ -0.29
Usp47-201ENSMUST00000106653 P04942 107 aa13.22□□□□□ -0.29
Usp47-201ENSMUST00000106653 CtsbP10605 339 aa13.22□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm15217A2CG07 155 aa13.22□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm9513B3GLJ6 99 aa13.22□□□□□ -0.29
Usp47-201ENSMUST00000106653 Card19Q9D1I2 183 aa13.22□□□□□ -0.29
Usp47-201ENSMUST00000106653 Rnf114Q9ET26 229 aa13.22□□□□□ -0.29
Usp47-201ENSMUST00000106653 Nxph4G3X9N5 304 aa13.21□□□□□ -0.29
Usp47-201ENSMUST00000106653 Reg3gO09049 174 aa13.21□□□□□ -0.29
Usp47-201ENSMUST00000106653 A230072I06RikQ3UUJ8 172 aa13.21□□□□□ -0.29
Usp47-201ENSMUST00000106653 Gm815Q3UWS2 115 aa13.21□□□□□ -0.29
Usp47-201ENSMUST00000106653 Anapc13Q8R034 74 aa13.21□□□□□ -0.29
Usp47-201ENSMUST00000106653 Arhgap21Q6DFV3 1944 aa13.21□□□□□ -0.29
Usp47-201ENSMUST00000106653 Ccl24Q9JKC0 119 aa13.21□□□□□ -0.29
Usp47-201ENSMUST00000106653 Slc25a48Q8BW66 306 aa13.21□□□□□ -0.3
Usp47-201ENSMUST00000106653 Dmrtc2Q8CGW9 370 aa13.21□□□□□ -0.3
Usp47-201ENSMUST00000106653 Klk1b4P00757 256 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Gm21370Q3T9V6 190 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Taf15Q8BQ46 557 aaKnown RBP13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Ankrd39Q9D2X0 183 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Them7Q9DCP4 223 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 P01738 130 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Defa1P11477 93 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 PoleQ9WVF7 2283 aa13.2□□□□□ -0.3
Usp47-201ENSMUST00000106653 Ighv1-64A0A075B5X3 117 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms