RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Vsig4F6TUL9 280 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 BokO35425 213 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Fgf6P21658 208 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Cdkn1aP39689 159 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Htr1dQ61224 374 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Lypd1Q8BLC3 141 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm5105Q8C6Y9 112 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Ebi3O35228 228 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Ins1P01325 108 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Olfr322Q5NCC8 327 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Olfr317Q5NCD6 327 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Odf3l1Q810P2 275 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 AhspQ9CY02 102 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Rab1bQ9D1G1 201 aa10.43□□□□□ -0.74
Nup88-201ENSMUST00000035283 Trav14-2A0A075B694 121 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Esp23A8R0V5 104 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Defa34D3Z0J0 93 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 H2-DMb1P35737 261 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Map1lc3aQ91VR7 121 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 1520401A03RikA0A0J9YVH6 598 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Tmem238A9JSM3 176 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gpx1P11352 201 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 LoxP28301 411 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Tmem136Q3TYE7 245 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Wipf1Q8K1I7 493 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm26920S4R2A5 56 aa10.42□□□□□ -0.74
Nup88-201ENSMUST00000035283 Trav16d-dv11A0A075B617 117 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gp9O88186 177 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Lynx1P0DP60 116 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Fxyd7P59648 80 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Ccsmst1Q6RUT7 136 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Rab9aQ9R0M6 201 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Tnfrsf9P20334 256 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 ElaneQ3UP87 265 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Olfr873Q8VFJ0 319 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Arpc1aQ9R0Q6 370 aa10.41□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm29289A0A087WPY7 166 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm4064A0A087WR82 380 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm10352B2RWR6 380 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm21693J3QK27 380 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 Rbmy1a1O35698 380 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 P01801 115 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 Gm5464Q3UY29 175 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 Prima1Q810F0 153 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 Rpl24Q8BP67 157 aaKnown RBP10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 RpeQ8VEE0 228 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 Olfr498Q8VEW2 330 aa10.4□□□□□ -0.74
Nup88-201ENSMUST00000035283 P01794 123 aa10.4□□□□□ -0.75
Nup88-201ENSMUST00000035283 Atp5iQ06185 71 aaKnown RBP10.4□□□□□ -0.75
Nup88-201ENSMUST00000035283 Cox11Q6P8I6 275 aa10.4□□□□□ -0.75
Nup88-201ENSMUST00000035283 Fmc1Q9CR13 113 aa10.4□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gtsf1lQ9CWD0 151 aa10.4□□□□□ -0.75
Nup88-201ENSMUST00000035283 Tmem89Q9DA04 169 aa10.4□□□□□ -0.75
Nup88-201ENSMUST00000035283 Prrx2Q06348 247 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gm6040Q4QY32 63 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Vsig8Q6P3A4 417 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Try10Q792Z1 246 aaKnown RBP10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Fam24aQ8CF27 98 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Tmem210Q9D2F0 147 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 CklfQ9DAS1 152 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 GlrxQ9QUH0 107 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Ighv1-31A0A0A6YWK5 117 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Amn1B8JKV0 258 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Zfp493E9Q1L8 384 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Tdgf1P51865 171 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Tcl1b4P56844 120 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Tmem11Q8BK08 190 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Odf3Q920N1 254 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 OtorQ9JIE3 128 aa10.39□□□□□ -0.75
Nup88-201ENSMUST00000035283 Sap30O88574 220 aa10.38□□□□□ -0.75
Nup88-201ENSMUST00000035283 7420426K07RikQ3UX66 186 aa10.38□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gm10118Q8C8J5 116 aa10.38□□□□□ -0.75
Nup88-201ENSMUST00000035283 Ndufa4l2Q4FZG9 87 aa10.38□□□□□ -0.75
Nup88-201ENSMUST00000035283 Snrnp40Q6PE01 358 aa10.38□□□□□ -0.75
Nup88-201ENSMUST00000035283 Crip3Q6Q6R3 243 aa10.38□□□□□ -0.75
Nup88-201ENSMUST00000035283 Il22ra1Q80XZ4 581 aa10.38□□□□□ -0.75
Nup88-201ENSMUST00000035283 Sec16aA2AIX1 2377 aa10.37□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gm2174F6ZVF2 133 aa10.37□□□□□ -0.75
Nup88-201ENSMUST00000035283 Bak1O08734 209 aa10.37□□□□□ -0.75
Nup88-201ENSMUST00000035283 P06330 118 aa10.37□□□□□ -0.75
Nup88-201ENSMUST00000035283 Svs5P30933 122 aa10.37□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gng4P50153 75 aa10.37□□□□□ -0.75
Nup88-201ENSMUST00000035283 PlnP61014 52 aa10.37□□□□□ -0.75
Nup88-201ENSMUST00000035283 Dkk4Q8VEJ3 221 aa10.37□□□□□ -0.75
Nup88-201ENSMUST00000035283 BatfO35284 125 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gm12888Q3UW77 119 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Olfr553Q7TRS6 326 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gm4763Q8CFJ5 196 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Hrct1Q9D6B9 109 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gm6525A0A0A6YW33 106 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Igkv4-81A0A0G2JEY5 119 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Gm28038F7BCN9 126 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Pcp4P63054 62 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Khdc1aQ3UWR2 166 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 CnfnQ6PCW6 111 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Hes7Q8BKT2 225 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 8030423J24RikQ9CX45 142 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 LbhQ9CX60 105 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Armcx4E9PWM3 2356 aa10.36□□□□□ -0.75
Nup88-201ENSMUST00000035283 Med13lQ6JPI3 2207 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 113.2 ms