RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 A8MWP4 228 aa10.09□□□□□ -0.79
PHGDH-234ENST00000642041 IGKV4-1P06312 121 aa10.09□□□□□ -0.79
PHGDH-234ENST00000642041 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
PHGDH-234ENST00000642041 SERP2Q8N6R1 65 aa10.08□□□□□ -0.8
PHGDH-234ENST00000642041 A0A087WVE0 104 aa10.07□□□□□ -0.8
PHGDH-234ENST00000642041 UQCRQO14949 82 aa10.07□□□□□ -0.8
PHGDH-234ENST00000642041 DSCR10P59022 87 aa10.07□□□□□ -0.8
PHGDH-234ENST00000642041 KRTAP10-8P60410 259 aa10.07□□□□□ -0.8
PHGDH-234ENST00000642041 SPINK1P00995 79 aa10.06□□□□□ -0.8
PHGDH-234ENST00000642041 KRTAP1-4P0C5Y4 121 aa10.06□□□□□ -0.8
PHGDH-234ENST00000642041 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-234ENST00000642041 ANAPC11Q9NYG5 84 aa10.06□□□□□ -0.8
PHGDH-234ENST00000642041 PRR15Q8IV56 129 aa10.05□□□□□ -0.8
PHGDH-234ENST00000642041 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
PHGDH-234ENST00000642041 A0A0G2JQZ4 141 aa10.04□□□□□ -0.8
PHGDH-234ENST00000642041 COX7CP15954 63 aa10.04□□□□□ -0.8
PHGDH-234ENST00000642041 TRAV7A0A075B6U4 112 aa10.03□□□□□ -0.8
PHGDH-234ENST00000642041 HCG22E2RYF7 251 aa10.02□□□□□ -0.81
PHGDH-234ENST00000642041 A0A087X002 238 aa9.99□□□□□ -0.81
PHGDH-234ENST00000642041 K7EQZ3 153 aa9.99□□□□□ -0.81
PHGDH-234ENST00000642041 HRCT1Q6UXD1 115 aa9.99□□□□□ -0.81
PHGDH-234ENST00000642041 KRTAP13-2Q52LG2 175 aa9.98□□□□□ -0.81
PHGDH-234ENST00000642041 C8orf87E5RJ46 101 aa9.95□□□□□ -0.82
PHGDH-234ENST00000642041 Q96NJ1 140 aa9.95□□□□□ -0.82
PHGDH-234ENST00000642041 Q8N9L7 120 aa9.94□□□□□ -0.82
PHGDH-234ENST00000642041 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
PHGDH-234ENST00000642041 CASC2Q6XLA1 102 aa9.92□□□□□ -0.82
PHGDH-234ENST00000642041 LINC00304Q8N9R0 145 aa9.92□□□□□ -0.82
PHGDH-234ENST00000642041 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
PHGDH-234ENST00000642041 TP53AIP1Q9HCN2 124 aa9.91□□□□□ -0.82
PHGDH-234ENST00000642041 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
PHGDH-234ENST00000642041 NDUFC1O43677 76 aa9.88□□□□□ -0.83
PHGDH-234ENST00000642041 OCR1Q9BZK8 76 aa9.88□□□□□ -0.83
PHGDH-234ENST00000642041 hDV103S1A0JD37 113 aa9.87□□□□□ -0.83
PHGDH-234ENST00000642041 PRR26Q8N8Z3 221 aa9.87□□□□□ -0.83
PHGDH-234ENST00000642041 FSIP2Q5CZC0 6907 aa9.86□□□□□ -0.83
PHGDH-234ENST00000642041 C8orf17Q9NRJ1 99 aa9.86□□□□□ -0.83
PHGDH-234ENST00000642041 H3BPC8 53 aa9.85□□□□□ -0.83
PHGDH-234ENST00000642041 TMEM254Q8TBM7 123 aa9.85□□□□□ -0.83
PHGDH-234ENST00000642041 CRCT1Q9UGL9 99 aa9.85□□□□□ -0.83
PHGDH-234ENST00000642041 C1orf195Q5TG92 126 aa9.83□□□□□ -0.84
PHGDH-234ENST00000642041 MMP24-AS1A0A0U1RRL7 71 aa9.82□□□□□ -0.84
PHGDH-234ENST00000642041 KLKP1Q107X0 134 aa9.82□□□□□ -0.84
PHGDH-234ENST00000642041 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
PHGDH-234ENST00000642041 CCDC179H3BU77 68 aa9.81□□□□□ -0.84
PHGDH-234ENST00000642041 MP68P56378 58 aa9.81□□□□□ -0.84
PHGDH-234ENST00000642041 WFDC13Q8IUB5 93 aa9.81□□□□□ -0.84
PHGDH-234ENST00000642041 MRPL34Q9BQ48 92 aaKnown RBP9.8□□□□□ -0.84
PHGDH-234ENST00000642041 LINC00313P59037 77 aa9.79□□□□□ -0.84
PHGDH-234ENST00000642041 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-234ENST00000642041 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
PHGDH-234ENST00000642041 TMEM258P61165 79 aa9.72□□□□□ -0.85
PHGDH-234ENST00000642041 PRR4Q16378 134 aa9.7□□□□□ -0.86
PHGDH-234ENST00000642041 TRAV22A0A0B4J277 110 aa9.68□□□□□ -0.86
PHGDH-234ENST00000642041 ATP5EP56381 51 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-234ENST00000642041 NDUFS5O43920 106 aa9.67□□□□□ -0.86
PHGDH-234ENST00000642041 FP248Q71RG6 208 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-234ENST00000642041 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-234ENST00000642041 H0Y9P7 68 aa9.63□□□□□ -0.87
PHGDH-234ENST00000642041 H7BZZ5 65 aa9.58□□□□□ -0.88
PHGDH-234ENST00000642041 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
PHGDH-234ENST00000642041 SNURFQ9Y675 71 aa9.58□□□□□ -0.88
PHGDH-234ENST00000642041 MUC17Q685J3 4493 aa9.58□□□□□ -0.88
PHGDH-234ENST00000642041 LOC101927531A0A1B0GV80 90 aa9.57□□□□□ -0.88
PHGDH-234ENST00000642041 LINC00208Q96KT6 92 aa9.57□□□□□ -0.88
PHGDH-234ENST00000642041 NOTCH2NLQ7Z3S9 236 aa9.56□□□□□ -0.88
PHGDH-234ENST00000642041 C1orf64Q8NEQ6 169 aa9.56□□□□□ -0.88
PHGDH-234ENST00000642041 KRTAP16-1A8MUX0 517 aa9.52□□□□□ -0.89
PHGDH-234ENST00000642041 RPS28P62857 69 aaKnown RBP9.52□□□□□ -0.89
PHGDH-234ENST00000642041 SPANXA2-OT1Q8N9U9 137 aa9.52□□□□□ -0.89
PHGDH-234ENST00000642041 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
PHGDH-234ENST00000642041 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
PHGDH-234ENST00000642041 C20orf166-AS1Q96NR2 134 aa9.45□□□□□ -0.9
PHGDH-234ENST00000642041 A8MUU9 505 aa9.43□□□□□ -0.9
PHGDH-234ENST00000642041 RETNLBQ9BQ08 111 aa9.43□□□□□ -0.9
PHGDH-234ENST00000642041 CYSTM1Q9H1C7 97 aa9.43□□□□□ -0.9
PHGDH-234ENST00000642041 KRTAP13-3Q3SY46 172 aa9.41□□□□□ -0.9
PHGDH-234ENST00000642041 CYP4F30PQ9H0H9 118 aa9.41□□□□□ -0.9
PHGDH-234ENST00000642041 Q75L30 129 aa9.4□□□□□ -0.9
PHGDH-234ENST00000642041 SERP1Q9Y6X1 66 aa9.4□□□□□ -0.9
PHGDH-234ENST00000642041 IGLV7-46A0A075B6I9 117 aa9.39□□□□□ -0.91
PHGDH-234ENST00000642041 IGKV2-30P06310 120 aa9.36□□□□□ -0.91
PHGDH-234ENST00000642041 Q5W150 140 aa9.36□□□□□ -0.91
PHGDH-234ENST00000642041 KRTAP9-7A8MTY7 169 aa9.34□□□□□ -0.91
PHGDH-234ENST00000642041 C9orf92A6NGG3 77 aa9.31□□□□□ -0.92
PHGDH-234ENST00000642041 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
PHGDH-234ENST00000642041 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
PHGDH-234ENST00000642041 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
PHGDH-234ENST00000642041 PCOTHQ58A44 107 aa9.25□□□□□ -0.93
PHGDH-234ENST00000642041 ACYP2P14621 99 aa9.22□□□□□ -0.93
PHGDH-234ENST00000642041 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
PHGDH-234ENST00000642041 A8MUN3 132 aa9.21□□□□□ -0.94
PHGDH-234ENST00000642041 IGKV2D-30A0A075B6S6 120 aa9.2□□□□□ -0.94
PHGDH-234ENST00000642041 SMIM26A0A096LP01 95 aa9.2□□□□□ -0.94
PHGDH-234ENST00000642041 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-234ENST00000642041 HRES1P13985 223 aa9.17□□□□□ -0.94
PHGDH-234ENST00000642041 XP32Q5T750 250 aa9.17□□□□□ -0.94
PHGDH-234ENST00000642041 DMAC1Q96GE9 116 aa9.14□□□□□ -0.95
PHGDH-234ENST00000642041 KRTAP4-1Q9BYQ7 146 aa9.14□□□□□ -0.95
PHGDH-234ENST00000642041 V9GYY9 64 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms