RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 IGHV6-1A0A0B4J1U7 121 aa8.28□□□□□ -1.08
COLCA2-207ENST00000639470 TMEM256-PLSCR3K7ERE1 68 aa8.28□□□□□ -1.08
COLCA2-207ENST00000639470 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
COLCA2-207ENST00000639470 COL5A1-AS1Q5SY13 56 aa8.27□□□□□ -1.09
COLCA2-207ENST00000639470 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
COLCA2-207ENST00000639470 TRBV20-1A0A075B6N2 111 aa8.25□□□□□ -1.09
COLCA2-207ENST00000639470 A0A1W2PPM0 123 aa8.25□□□□□ -1.09
COLCA2-207ENST00000639470 UBE2V1Q13404 147 aa8.25□□□□□ -1.09
COLCA2-207ENST00000639470 HRES1P13985 223 aa8.23□□□□□ -1.09
COLCA2-207ENST00000639470 BAALC-AS2P0C853 105 aa8.2□□□□□ -1.1
COLCA2-207ENST00000639470 RBM3P98179 157 aaKnown RBP8.19□□□□□ -1.1
COLCA2-207ENST00000639470 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
COLCA2-207ENST00000639470 FAM236DA0A1B0GTK5 79 aa8.18□□□□□ -1.1
COLCA2-207ENST00000639470 A0A1B0GVX0 72 aa8.18□□□□□ -1.1
COLCA2-207ENST00000639470 FAM236CP0DP71 79 aa8.18□□□□□ -1.1
COLCA2-207ENST00000639470 MT2AP02795 61 aa8.16□□□□□ -1.1
COLCA2-207ENST00000639470 DSCR8Q96T75 97 aa8.16□□□□□ -1.1
COLCA2-207ENST00000639470 SPCS1Q9Y6A9 102 aa8.16□□□□□ -1.1
COLCA2-207ENST00000639470 C9JAW5 83 aa8.15□□□□□ -1.1
COLCA2-207ENST00000639470 H3BT86 120 aa8.12□□□□□ -1.11
COLCA2-207ENST00000639470 MT1FP04733 61 aa8.12□□□□□ -1.11
COLCA2-207ENST00000639470 Q6ZQT0 140 aa8.12□□□□□ -1.11
COLCA2-207ENST00000639470 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
COLCA2-207ENST00000639470 SMCPP49901 116 aaPredicted RBP8.11□□□□□ -1.11
COLCA2-207ENST00000639470 JMJD7-PLA2G4BH0Y9G9 81 aa8.1□□□□□ -1.11
COLCA2-207ENST00000639470 K7EP34 96 aa8.1□□□□□ -1.11
COLCA2-207ENST00000639470 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
COLCA2-207ENST00000639470 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
COLCA2-207ENST00000639470 RBM12B-AS1Q9P1G2 102 aa8.08□□□□□ -1.12
COLCA2-207ENST00000639470 C14orf132Q9NPU4 83 aa8.07□□□□□ -1.12
COLCA2-207ENST00000639470 IGKV3D-7A0A0C4DH55 119 aa8.05□□□□□ -1.12
COLCA2-207ENST00000639470 SPINK7P58062 85 aa8.05□□□□□ -1.12
COLCA2-207ENST00000639470 GTF2H5Q6ZYL4 71 aa8.05□□□□□ -1.12
COLCA2-207ENST00000639470 USH2AO75445 5202 aa8.04□□□□□ -1.12
COLCA2-207ENST00000639470 J3KT08 172 aa8.04□□□□□ -1.12
COLCA2-207ENST00000639470 C8orf17Q9NRJ1 99 aa8.04□□□□□ -1.12
COLCA2-207ENST00000639470 LOC110117498A0A087WWA1 95 aa8.03□□□□□ -1.12
COLCA2-207ENST00000639470 Q8N9P0 234 aaPredicted RBP8.02□□□□□ -1.13
COLCA2-207ENST00000639470 PRO0461Q9UI25 63 aa8.02□□□□□ -1.13
COLCA2-207ENST00000639470 A8MWP4 228 aa8.01□□□□□ -1.13
COLCA2-207ENST00000639470 PDE6GP18545 87 aa8.01□□□□□ -1.13
COLCA2-207ENST00000639470 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
COLCA2-207ENST00000639470 KRTAP10-10P60014 251 aa8□□□□□ -1.13
COLCA2-207ENST00000639470 C21orf62-AS1Q17RA5 79 aa8□□□□□ -1.13
COLCA2-207ENST00000639470 SSPOA2VEC9 5147 aa7.98□□□□□ -1.13
COLCA2-207ENST00000639470 NDUFB1O75438 58 aa7.98□□□□□ -1.13
COLCA2-207ENST00000639470 A0A1B0GW54 56 aa7.96□□□□□ -1.14
COLCA2-207ENST00000639470 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.96□□□□□ -1.14
COLCA2-207ENST00000639470 WFDC13Q8IUB5 93 aa7.96□□□□□ -1.14
COLCA2-207ENST00000639470 F8W1H4 67 aa7.95□□□□□ -1.14
COLCA2-207ENST00000639470 Q6ZVQ6 151 aa7.95□□□□□ -1.14
COLCA2-207ENST00000639470 MMP24-AS1A0A0U1RRL7 71 aa7.94□□□□□ -1.14
COLCA2-207ENST00000639470 PRR15Q8IV56 129 aa7.93□□□□□ -1.14
COLCA2-207ENST00000639470 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
COLCA2-207ENST00000639470 NREPQ16612 68 aa7.91□□□□□ -1.14
COLCA2-207ENST00000639470 K7EQZ3 153 aa7.9□□□□□ -1.14
COLCA2-207ENST00000639470 A0A1B0GV90 55 aa7.88□□□□□ -1.15
COLCA2-207ENST00000639470 KRTAP9-7A8MTY7 169 aa7.87□□□□□ -1.15
COLCA2-207ENST00000639470 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
COLCA2-207ENST00000639470 ETDBQ3ZM63 59 aa7.85□□□□□ -1.15
COLCA2-207ENST00000639470 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
COLCA2-207ENST00000639470 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.15
COLCA2-207ENST00000639470 Q8N9L7 120 aa7.83□□□□□ -1.16
COLCA2-207ENST00000639470 hDV103S1A0JD37 113 aa7.82□□□□□ -1.16
COLCA2-207ENST00000639470 NDUFS5O43920 106 aa7.82□□□□□ -1.16
COLCA2-207ENST00000639470 Q5W150 140 aa7.82□□□□□ -1.16
COLCA2-207ENST00000639470 IGKV2D-30A0A075B6S6 120 aa7.78□□□□□ -1.16
COLCA2-207ENST00000639470 IGKV2-30P06310 120 aa7.78□□□□□ -1.16
COLCA2-207ENST00000639470 BPY2O14599 106 aa7.77□□□□□ -1.17
COLCA2-207ENST00000639470 LINC00846Q9NV44 126 aa7.75□□□□□ -1.17
COLCA2-207ENST00000639470 UBL5Q9BZL1 73 aa7.74□□□□□ -1.17
COLCA2-207ENST00000639470 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
COLCA2-207ENST00000639470 HCG22E2RYF7 251 aa7.7□□□□□ -1.18
COLCA2-207ENST00000639470 CASC2Q6XLA1 102 aa7.7□□□□□ -1.18
COLCA2-207ENST00000639470 FAM240AA0A1B0GVK7 77 aa7.68□□□□□ -1.18
COLCA2-207ENST00000639470 ACYP1P07311 99 aa7.68□□□□□ -1.18
COLCA2-207ENST00000639470 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
COLCA2-207ENST00000639470 C4orf26Q17RF5 130 aa7.67□□□□□ -1.18
COLCA2-207ENST00000639470 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
COLCA2-207ENST00000639470 CXCL6P80162 114 aa7.61□□□□□ -1.19
COLCA2-207ENST00000639470 KRTAP3-1Q9BYR8 98 aa7.59□□□□□ -1.19
COLCA2-207ENST00000639470 J3QR89 54 aa7.57□□□□□ -1.2
COLCA2-207ENST00000639470 C5orf47Q569G3 176 aa7.56□□□□□ -1.2
COLCA2-207ENST00000639470 ATP5EP2Q5VTU8 51 aa7.56□□□□□ -1.2
COLCA2-207ENST00000639470 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
COLCA2-207ENST00000639470 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
COLCA2-207ENST00000639470 C1orf64Q8NEQ6 169 aa7.46□□□□□ -1.22
COLCA2-207ENST00000639470 K7ERU9 68 aa7.45□□□□□ -1.22
COLCA2-207ENST00000639470 LCA10Q71F78 164 aa7.45□□□□□ -1.22
COLCA2-207ENST00000639470 S4R3F8 94 aa7.45□□□□□ -1.22
COLCA2-207ENST00000639470 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
COLCA2-207ENST00000639470 FAM236AA0A1B0GUQ0 79 aa7.43□□□□□ -1.22
COLCA2-207ENST00000639470 FAM236BA0A1B0GV22 79 aa7.43□□□□□ -1.22
COLCA2-207ENST00000639470 HIST1H4AP62805 103 aaKnown RBP7.43□□□□□ -1.22
COLCA2-207ENST00000639470 MT1BP07438 61 aa7.42□□□□□ -1.22
COLCA2-207ENST00000639470 A0A087WVE0 104 aa7.4□□□□□ -1.22
COLCA2-207ENST00000639470 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
COLCA2-207ENST00000639470 TP53AIP1Q9HCN2 124 aa7.36□□□□□ -1.23
COLCA2-207ENST00000639470 KRTAP6-3Q3LI67 103 aa7.34□□□□□ -1.23
COLCA2-207ENST00000639470 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms