RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 SPRR1BP22528 89 aa1.71□□□□□ -2.14
CHD2-228ENST00000637613 CRYBG3Q68DQ2 2970 aa1.71□□□□□ -2.14
CHD2-228ENST00000637613 C9orf163Q8N9P6 203 aa1.71□□□□□ -2.14
CHD2-228ENST00000637613 ZCCHC13Q8WW36 166 aaKnown RBP1.71□□□□□ -2.14
CHD2-228ENST00000637613 MRPL34Q9BQ48 92 aaKnown RBP1.71□□□□□ -2.14
CHD2-228ENST00000637613 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
CHD2-228ENST00000637613 ZFHX3Q15911 3703 aa1.71□□□□□ -2.14
CHD2-228ENST00000637613 C2CD3Q4AC94 2353 aa1.71□□□□□ -2.14
CHD2-228ENST00000637613 NCOR2Q9Y618 2525 aa1.71□□□□□ -2.14
CHD2-228ENST00000637613 ACYP2P14621 99 aa1.7□□□□□ -2.14
CHD2-228ENST00000637613 PTPN13Q12923 2485 aa1.7□□□□□ -2.14
CHD2-228ENST00000637613 KRTAP6-3Q3LI67 103 aa1.7□□□□□ -2.14
CHD2-228ENST00000637613 PCOTHQ58A44 107 aa1.7□□□□□ -2.14
CHD2-228ENST00000637613 KRTAP26-1Q6PEX3 210 aa1.7□□□□□ -2.14
CHD2-228ENST00000637613 C7orf65Q6ZTY9 151 aa1.7□□□□□ -2.14
CHD2-228ENST00000637613 SMR3AQ99954 134 aa1.7□□□□□ -2.14
CHD2-228ENST00000637613 VPS13CQ709C8 3753 aa1.7□□□□□ -2.14
CHD2-228ENST00000637613 ASH1LQ9NR48 2969 aaKnown RBP1.69□□□□□ -2.14
CHD2-228ENST00000637613 A0A1B0GU69 56 aa1.69□□□□□ -2.14
CHD2-228ENST00000637613 CHD6Q8TD26 2715 aa1.69□□□□□ -2.14
CHD2-228ENST00000637613 SPTBN4Q9H254 2564 aa1.69□□□□□ -2.14
CHD2-228ENST00000637613 SONP18583 2426 aaKnown RBP1.69□□□□□ -2.14
CHD2-228ENST00000637613 COL12A1Q99715 3063 aa1.69□□□□□ -2.14
CHD2-228ENST00000637613 FN1P02751 2386 aaKnown RBP1.69□□□□□ -2.14
CHD2-228ENST00000637613 FLNAP21333 2647 aaKnown RBP1.69□□□□□ -2.14
CHD2-228ENST00000637613 RELNP78509 3460 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 MYO18BQ8IUG5 2567 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 USP9XQ93008 2570 aaPredicted RBP1.68□□□□□ -2.14
CHD2-228ENST00000637613 ITPR3Q14573 2671 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 JMJD1CQ15652 2540 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 MMP24-AS1A0A0U1RRL7 71 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 ASB16-AS1Q495Z4 193 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 Q5VV11 94 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 PHF5AQ7RTV0 110 aaKnown RBP1.68□□□□□ -2.14
CHD2-228ENST00000637613 LINC00472Q9H8W2 130 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 LINC01558Q9Y6Z2 57 aa1.68□□□□□ -2.14
CHD2-228ENST00000637613 USP9YO00507 2555 aaPredicted RBP1.68□□□□□ -2.14
CHD2-228ENST00000637613 CHD8Q9HCK8 2581 aa1.67□□□□□ -2.14
CHD2-228ENST00000637613 AKAP9Q99996 3911 aa1.67□□□□□ -2.14
CHD2-228ENST00000637613 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
CHD2-228ENST00000637613 NBDYA0A0U1RRE5 68 aa1.67□□□□□ -2.14
CHD2-228ENST00000637613 SPAG11AQ6PDA7 123 aa1.67□□□□□ -2.14
CHD2-228ENST00000637613 SPINK6Q6UWN8 80 aa1.67□□□□□ -2.14
CHD2-228ENST00000637613 MAP1AP78559 2803 aaPredicted RBP1.67□□□□□ -2.14
CHD2-228ENST00000637613 UTP20O75691 2785 aaKnown RBP1.67□□□□□ -2.14
CHD2-228ENST00000637613 CACNA1AO00555 2505 aa1.66□□□□□ -2.14
CHD2-228ENST00000637613 UQCR11O14957 56 aa1.66□□□□□ -2.14
CHD2-228ENST00000637613 CCDC168Q8NDH2 2452 aa1.66□□□□□ -2.14
CHD2-228ENST00000637613 ABCA12Q86UK0 2595 aa1.66□□□□□ -2.14
CHD2-228ENST00000637613 TEX15Q9BXT5 2789 aa1.66□□□□□ -2.14
CHD2-228ENST00000637613 ZNF462Q96JM2 2506 aa1.66□□□□□ -2.14
CHD2-228ENST00000637613 SSBP3-AS1Q7Z2R9 100 aa1.65□□□□□ -2.15
CHD2-228ENST00000637613 RETNLBQ9BQ08 111 aa1.65□□□□□ -2.15
CHD2-228ENST00000637613 PIEZO1Q92508 2521 aa1.65□□□□□ -2.15
CHD2-228ENST00000637613 UBR5O95071 2799 aaPredicted RBP1.64□□□□□ -2.15
CHD2-228ENST00000637613 SETXQ7Z333 2677 aaKnown RBP1.64□□□□□ -2.15
CHD2-228ENST00000637613 GCN1Q92616 2671 aaKnown RBP1.64□□□□□ -2.15
CHD2-228ENST00000637613 SVEP1Q4LDE5 3571 aa1.64□□□□□ -2.15
CHD2-228ENST00000637613 MIR22HGQ0VDD5 57 aa1.64□□□□□ -2.15
CHD2-228ENST00000637613 APLNQ9ULZ1 77 aa1.64□□□□□ -2.15
CHD2-228ENST00000637613 POLQO75417 2590 aa1.64□□□□□ -2.15
CHD2-228ENST00000637613 EPG5Q9HCE0 2579 aa1.64□□□□□ -2.15
CHD2-228ENST00000637613 IGSF10Q6WRI0 2623 aa1.64□□□□□ -2.15
CHD2-228ENST00000637613 A0A087WTM6 91 aa1.63□□□□□ -2.15
CHD2-228ENST00000637613 K7EIL1 84 aa1.63□□□□□ -2.15
CHD2-228ENST00000637613 C1orf134Q5TEV5 83 aa1.63□□□□□ -2.15
CHD2-228ENST00000637613 DMAC1Q96GE9 116 aa1.63□□□□□ -2.15
CHD2-228ENST00000637613 MXRA5Q9NR99 2828 aa1.63□□□□□ -2.15
CHD2-228ENST00000637613 ITPR1Q14643 2758 aa1.63□□□□□ -2.15
CHD2-228ENST00000637613 CELSR2Q9HCU4 2923 aa1.63□□□□□ -2.15
CHD2-228ENST00000637613 A6NN06 94 aa1.62□□□□□ -2.15
CHD2-228ENST00000637613 Q6ZRN7 208 aaPredicted RBP1.62□□□□□ -2.15
CHD2-228ENST00000637613 KRTAP13-1Q8IUC0 172 aa1.62□□□□□ -2.15
CHD2-228ENST00000637613 PLAC8Q9NZF1 115 aa1.62□□□□□ -2.15
CHD2-228ENST00000637613 USP24Q9UPU5 2620 aa1.62□□□□□ -2.15
CHD2-228ENST00000637613 FBN2P35556 2912 aa1.62□□□□□ -2.15
CHD2-228ENST00000637613 MTORP42345 2549 aa1.62□□□□□ -2.15
CHD2-228ENST00000637613 APCP25054 2843 aa1.62□□□□□ -2.15
CHD2-228ENST00000637613 ZANQ9Y493 2812 aa1.62□□□□□ -2.15
CHD2-228ENST00000637613 CSMD2Q7Z408 3487 aa1.61□□□□□ -2.15
CHD2-228ENST00000637613 KRTAP13-4Q3LI77 160 aa1.61□□□□□ -2.15
CHD2-228ENST00000637613 Q96NJ1 140 aa1.61□□□□□ -2.15
CHD2-228ENST00000637613 SETD2Q9BYW2 2564 aaPredicted RBP1.6□□□□□ -2.15
CHD2-228ENST00000637613 FLNCQ14315 2725 aa1.6□□□□□ -2.15
CHD2-228ENST00000637613 SPINK1P00995 79 aa1.6□□□□□ -2.15
CHD2-228ENST00000637613 ZFYVE26Q68DK2 2539 aa1.6□□□□□ -2.15
CHD2-228ENST00000637613 ACANP16112 2415 aa1.59□□□□□ -2.15
CHD2-228ENST00000637613 ANK3Q12955 4377 aaKnown RBP1.59□□□□□ -2.15
CHD2-228ENST00000637613 LY6G6CO95867 125 aa1.59□□□□□ -2.15
CHD2-228ENST00000637613 SPINK7P58062 85 aa1.59□□□□□ -2.15
CHD2-228ENST00000637613 CFAP46Q8IYW2 2715 aa1.58□□□□□ -2.16
CHD2-228ENST00000637613 ROMO1P60602 79 aa1.58□□□□□ -2.16
CHD2-228ENST00000637613 RPS29P62273 56 aaKnown RBP1.58□□□□□ -2.16
CHD2-228ENST00000637613 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
CHD2-228ENST00000637613 ZNF469Q96JG9 3925 aaPredicted RBP1.58□□□□□ -2.16
CHD2-228ENST00000637613 TEP1Q99973 2627 aaKnown RBP1.58□□□□□ -2.16
CHD2-228ENST00000637613 BAHCC1Q9P281 2608 aa1.57□□□□□ -2.16
CHD2-228ENST00000637613 ITPR2Q14571 2701 aa1.57□□□□□ -2.16
CHD2-228ENST00000637613 FASNP49327 2511 aaKnown RBP1.57□□□□□ -2.16
CHD2-228ENST00000637613 NSD1Q96L73 2696 aaPredicted RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms