RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DSCR10P59022 87 aa8.68□□□□□ -1.02
CLN6-216ENST00000636876 MUC17Q685J3 4493 aa8.67□□□□□ -1.02
CLN6-216ENST00000636876 A8MWP4 228 aa8.67□□□□□ -1.02
CLN6-216ENST00000636876 UBL5Q9BZL1 73 aa8.67□□□□□ -1.02
CLN6-216ENST00000636876 NDUFB1O75438 58 aa8.66□□□□□ -1.02
CLN6-216ENST00000636876 LINC00313P59037 77 aa8.66□□□□□ -1.02
CLN6-216ENST00000636876 BPY2O14599 106 aa8.65□□□□□ -1.02
CLN6-216ENST00000636876 IGKV3D-7A0A0C4DH55 119 aa8.64□□□□□ -1.03
CLN6-216ENST00000636876 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
CLN6-216ENST00000636876 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
CLN6-216ENST00000636876 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
CLN6-216ENST00000636876 RPL37P61927 97 aaKnown RBP8.62□□□□□ -1.03
CLN6-216ENST00000636876 FAM240AA0A1B0GVK7 77 aa8.61□□□□□ -1.03
CLN6-216ENST00000636876 ACYP1P07311 99 aa8.61□□□□□ -1.03
CLN6-216ENST00000636876 PRR15Q8IV56 129 aa8.61□□□□□ -1.03
CLN6-216ENST00000636876 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
CLN6-216ENST00000636876 Q75L30 129 aa8.6□□□□□ -1.03
CLN6-216ENST00000636876 MUC2Q02817 5179 aa8.59□□□□□ -1.03
CLN6-216ENST00000636876 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
CLN6-216ENST00000636876 A8MUU9 505 aa8.58□□□□□ -1.04
CLN6-216ENST00000636876 K7EQZ3 153 aa8.58□□□□□ -1.04
CLN6-216ENST00000636876 C8orf17Q9NRJ1 99 aa8.58□□□□□ -1.04
CLN6-216ENST00000636876 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
CLN6-216ENST00000636876 Q8N9L7 120 aa8.54□□□□□ -1.04
CLN6-216ENST00000636876 MMP24-AS1A0A0U1RRL7 71 aa8.53□□□□□ -1.04
CLN6-216ENST00000636876 J3QR89 54 aa8.51□□□□□ -1.05
CLN6-216ENST00000636876 CXCL6P80162 114 aa8.51□□□□□ -1.05
CLN6-216ENST00000636876 ATP11AUNQ6ZP68 121 aa8.5□□□□□ -1.05
CLN6-216ENST00000636876 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
CLN6-216ENST00000636876 hDV103S1A0JD37 113 aa8.47□□□□□ -1.05
CLN6-216ENST00000636876 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
CLN6-216ENST00000636876 TMEM254Q8TBM7 123 aa8.47□□□□□ -1.05
CLN6-216ENST00000636876 FAT4Q6V0I7 4981 aa8.47□□□□□ -1.05
CLN6-216ENST00000636876 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
CLN6-216ENST00000636876 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
CLN6-216ENST00000636876 MRPL34Q9BQ48 92 aaKnown RBP8.45□□□□□ -1.06
CLN6-216ENST00000636876 LINC00643Q86TS7 51 aa8.44□□□□□ -1.06
CLN6-216ENST00000636876 CASC2Q6XLA1 102 aa8.43□□□□□ -1.06
CLN6-216ENST00000636876 WFDC13Q8IUB5 93 aa8.43□□□□□ -1.06
CLN6-216ENST00000636876 A0A0U1RQV1 116 aa8.41□□□□□ -1.06
CLN6-216ENST00000636876 HCG22E2RYF7 251 aa8.41□□□□□ -1.06
CLN6-216ENST00000636876 LCE2AQ5TA79 106 aaPredicted RBP8.4□□□□□ -1.06
CLN6-216ENST00000636876 ZCCHC13Q8WW36 166 aaKnown RBP8.39□□□□□ -1.07
CLN6-216ENST00000636876 K7ERU9 68 aa8.38□□□□□ -1.07
CLN6-216ENST00000636876 NDUFS5O43920 106 aa8.36□□□□□ -1.07
CLN6-216ENST00000636876 HIST1H4AP62805 103 aaKnown RBP8.33□□□□□ -1.08
CLN6-216ENST00000636876 A0A087WVE0 104 aa8.27□□□□□ -1.09
CLN6-216ENST00000636876 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
CLN6-216ENST00000636876 Q5W150 140 aa8.25□□□□□ -1.09
CLN6-216ENST00000636876 TP53AIP1Q9HCN2 124 aa8.23□□□□□ -1.09
CLN6-216ENST00000636876 SPINK7P58062 85 aa8.22□□□□□ -1.09
CLN6-216ENST00000636876 KRTAP19-2Q3LHN2 52 aa8.22□□□□□ -1.09
CLN6-216ENST00000636876 MT-ATP8P03928 68 aa8.19□□□□□ -1.1
CLN6-216ENST00000636876 HRES1P13985 223 aa8.19□□□□□ -1.1
CLN6-216ENST00000636876 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
CLN6-216ENST00000636876 IMUPQ9GZP8 106 aa8.17□□□□□ -1.1
CLN6-216ENST00000636876 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.1
CLN6-216ENST00000636876 MPLKIPQ8TAP9 179 aa8.15□□□□□ -1.1
CLN6-216ENST00000636876 IGKV2D-30A0A075B6S6 120 aa8.14□□□□□ -1.11
CLN6-216ENST00000636876 IGKV2-30P06310 120 aa8.14□□□□□ -1.11
CLN6-216ENST00000636876 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
CLN6-216ENST00000636876 FLGP20930 4061 aaPredicted RBP8.13□□□□□ -1.11
CLN6-216ENST00000636876 UQCRQO14949 82 aa8.12□□□□□ -1.11
CLN6-216ENST00000636876 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
CLN6-216ENST00000636876 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
CLN6-216ENST00000636876 OCR1Q9BZK8 76 aa8.07□□□□□ -1.12
CLN6-216ENST00000636876 FAM236DA0A1B0GTK5 79 aa8.06□□□□□ -1.12
CLN6-216ENST00000636876 FAM236CP0DP71 79 aa8.06□□□□□ -1.12
CLN6-216ENST00000636876 SCGB1A1P11684 91 aa8.05□□□□□ -1.12
CLN6-216ENST00000636876 H0Y9P7 68 aa8.04□□□□□ -1.12
CLN6-216ENST00000636876 MT1HP80294 61 aa8.04□□□□□ -1.12
CLN6-216ENST00000636876 FAM236AA0A1B0GUQ0 79 aa8.02□□□□□ -1.13
CLN6-216ENST00000636876 FAM236BA0A1B0GV22 79 aa8.02□□□□□ -1.13
CLN6-216ENST00000636876 ATOX1O00244 68 aa8.02□□□□□ -1.13
CLN6-216ENST00000636876 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
CLN6-216ENST00000636876 LCE2DQ5TA82 110 aaPredicted RBP8□□□□□ -1.13
CLN6-216ENST00000636876 CYP4F30PQ9H0H9 118 aa7.99□□□□□ -1.13
CLN6-216ENST00000636876 MP68P56378 58 aa7.96□□□□□ -1.14
CLN6-216ENST00000636876 C4orf26Q17RF5 130 aa7.96□□□□□ -1.14
CLN6-216ENST00000636876 C5orf47Q569G3 176 aa7.96□□□□□ -1.14
CLN6-216ENST00000636876 SMIM20Q8N5G0 67 aa7.95□□□□□ -1.14
CLN6-216ENST00000636876 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
CLN6-216ENST00000636876 LINC00208Q96KT6 92 aa7.94□□□□□ -1.14
CLN6-216ENST00000636876 TRAV7A0A075B6U4 112 aa7.92□□□□□ -1.14
CLN6-216ENST00000636876 M0R2T5 61 aa7.92□□□□□ -1.14
CLN6-216ENST00000636876 CRCT1Q9UGL9 99 aa7.92□□□□□ -1.14
CLN6-216ENST00000636876 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
CLN6-216ENST00000636876 H3BPC8 53 aa7.91□□□□□ -1.14
CLN6-216ENST00000636876 H1FX-AS1Q4G0G2 97 aa7.89□□□□□ -1.15
CLN6-216ENST00000636876 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
CLN6-216ENST00000636876 KLKP1Q107X0 134 aa7.84□□□□□ -1.15
CLN6-216ENST00000636876 KRTAP10-6P60371 365 aaPredicted RBP7.83□□□□□ -1.16
CLN6-216ENST00000636876 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
CLN6-216ENST00000636876 SERP2Q8N6R1 65 aa7.8□□□□□ -1.16
CLN6-216ENST00000636876 S4R3F8 94 aa7.72□□□□□ -1.17
CLN6-216ENST00000636876 SNURFQ9Y675 71 aa7.71□□□□□ -1.18
CLN6-216ENST00000636876 A8MUN3 132 aa7.7□□□□□ -1.18
CLN6-216ENST00000636876 C20orf197Q8N268 126 aa7.7□□□□□ -1.18
CLN6-216ENST00000636876 KRTAP9-8Q9BYQ0 159 aa7.68□□□□□ -1.18
CLN6-216ENST00000636876 COX7CP15954 63 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms