RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 FAM240BA0A1B0GVZ2 78 aa0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 C9JQL5 133 aa0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 H3BUT2 72 aa0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 MT-ATP8P03928 68 aa0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 PET100P0DJ07 73 aa0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 NEDD8Q15843 81 aa0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 TMEM170BQ5T4T1 132 aa0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 MRPL54Q6P161 138 aaKnown RBP0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 C20orf197Q8N268 126 aa0.71□□□□□ -2.3
SCARNA4.1-201ENST00000628597 A0A087WVE0 104 aa0.7□□□□□ -2.3
SCARNA4.1-201ENST00000628597 BPY2O14599 106 aa0.7□□□□□ -2.3
SCARNA4.1-201ENST00000628597 ZNF22P17026 224 aaPredicted RBP0.7□□□□□ -2.3
SCARNA4.1-201ENST00000628597 ORMDL3Q8N138 153 aa0.7□□□□□ -2.3
SCARNA4.1-201ENST00000628597 Q8N8P6 123 aa0.7□□□□□ -2.3
SCARNA4.1-201ENST00000628597 MAP1LC3AQ9H492 121 aa0.7□□□□□ -2.3
SCARNA4.1-201ENST00000628597 TRAPPC1Q9Y5R8 145 aa0.7□□□□□ -2.3
SCARNA4.1-201ENST00000628597 MYMXA0A1B0GTQ4 84 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 A0A1B0GV50 99 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 CENPXA8MT69 81 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 F8W036 122 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 TMEM250H0YL14 139 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 K7EMI3 77 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 IGLC3P0DOY3 106 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 BTCP35070 178 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 KRTAP21-2Q3LI59 83 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 PYDC2Q56P42 97 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 TOMM6Q96B49 74 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 PRELID3AQ96N28 172 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 NAT8Q9UHE5 227 aa0.69□□□□□ -2.3
SCARNA4.1-201ENST00000628597 LINC01546A6NGU7 62 aa0.68□□□□□ -2.3
SCARNA4.1-201ENST00000628597 NDUFC1O43677 76 aa0.68□□□□□ -2.3
SCARNA4.1-201ENST00000628597 SPINT4Q6UDR6 99 aa0.68□□□□□ -2.3
SCARNA4.1-201ENST00000628597 MUSTN1Q8IVN3 82 aa0.68□□□□□ -2.3
SCARNA4.1-201ENST00000628597 PPP1R1CQ8WVI7 109 aa0.68□□□□□ -2.3
SCARNA4.1-201ENST00000628597 SPANXDQ9BXN6 97 aa0.68□□□□□ -2.3
SCARNA4.1-201ENST00000628597 LINC01549A6NIU2 74 aa0.67□□□□□ -2.3
SCARNA4.1-201ENST00000628597 HCG22E2RYF7 251 aa0.67□□□□□ -2.3
SCARNA4.1-201ENST00000628597 NDUFS5O43920 106 aa0.67□□□□□ -2.3
SCARNA4.1-201ENST00000628597 NDUFB1O75438 58 aa0.67□□□□□ -2.3
SCARNA4.1-201ENST00000628597 S100A8P05109 93 aa0.67□□□□□ -2.3
SCARNA4.1-201ENST00000628597 ADCYAP1P18509 176 aa0.67□□□□□ -2.3
SCARNA4.1-201ENST00000628597 NPC2P61916 151 aa0.67□□□□□ -2.3
SCARNA4.1-201ENST00000628597 LINC00575Q6W349 94 aa0.67□□□□□ -2.3
SCARNA4.1-201ENST00000628597 A0A1B0GW15 77 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 K7EN84 100 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 LYRM1O43325 122 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 MPC2O95563 127 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 HBDP02042 147 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 SEC61GP60059 68 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 IFITM2Q01629 132 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 Q6ZQY7 126 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 SPANXA2-OT1Q8N9U9 137 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 LAMTOR2Q9Y2Q5 125 aa0.66□□□□□ -2.3
SCARNA4.1-201ENST00000628597 A6NDN8 102 aa0.65□□□□□ -2.31
SCARNA4.1-201ENST00000628597 PDE6DO43924 150 aa0.65□□□□□ -2.31
SCARNA4.1-201ENST00000628597 MANBALQ9NQG1 85 aa0.65□□□□□ -2.31
SCARNA4.1-201ENST00000628597 GNG13Q9P2W3 67 aa0.65□□□□□ -2.31
SCARNA4.1-201ENST00000628597 NAT8BQ9UHF3 227 aa0.65□□□□□ -2.31
SCARNA4.1-201ENST00000628597 H0Y8G0 127 aa0.64□□□□□ -2.31
SCARNA4.1-201ENST00000628597 TRIQKQ629K1 86 aa0.64□□□□□ -2.31
SCARNA4.1-201ENST00000628597 PPDPFLQ8WWR9 84 aa0.64□□□□□ -2.31
SCARNA4.1-201ENST00000628597 C8orf17Q9NRJ1 99 aa0.64□□□□□ -2.31
SCARNA4.1-201ENST00000628597 SPANXCQ9NY87 97 aa0.64□□□□□ -2.31
SCARNA4.1-201ENST00000628597 hADV29S1A0JD25 119 aa0.63□□□□□ -2.31
SCARNA4.1-201ENST00000628597 C11orf86A6NJI1 115 aa0.63□□□□□ -2.31
SCARNA4.1-201ENST00000628597 VAMP3Q15836 100 aa0.63□□□□□ -2.31
SCARNA4.1-201ENST00000628597 FAM213BQ8TBF2 198 aa0.63□□□□□ -2.31
SCARNA4.1-201ENST00000628597 A0A1B0GXF2 115 aa0.62□□□□□ -2.31
SCARNA4.1-201ENST00000628597 J3KT08 172 aa0.62□□□□□ -2.31
SCARNA4.1-201ENST00000628597 LEPROTO15243 131 aa0.62□□□□□ -2.31
SCARNA4.1-201ENST00000628597 LOC110117498A0A087WWA1 95 aa0.61□□□□□ -2.31
SCARNA4.1-201ENST00000628597 TIMM17BO60830 172 aa0.61□□□□□ -2.31
SCARNA4.1-201ENST00000628597 IFITM3Q01628 133 aa0.61□□□□□ -2.31
SCARNA4.1-201ENST00000628597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.61□□□□□ -2.31
SCARNA4.1-201ENST00000628597 BAGE3Q86Y29 109 aa0.61□□□□□ -2.31
SCARNA4.1-201ENST00000628597 MRPL34Q9BQ48 92 aaKnown RBP0.61□□□□□ -2.31
SCARNA4.1-201ENST00000628597 NAA38Q9BRA0 125 aaKnown RBP0.61□□□□□ -2.31
SCARNA4.1-201ENST00000628597 TRGC2P03986 189 aa0.6□□□□□ -2.31
SCARNA4.1-201ENST00000628597 KRTAP12-3P60328 96 aa0.6□□□□□ -2.31
SCARNA4.1-201ENST00000628597 UQCC3Q6UW78 93 aa0.6□□□□□ -2.31
SCARNA4.1-201ENST00000628597 C12orf57Q99622 126 aa0.6□□□□□ -2.31
SCARNA4.1-201ENST00000628597 OSTCQ9NRP0 149 aa0.6□□□□□ -2.31
SCARNA4.1-201ENST00000628597 TRBV7-4A0A0J9YYF1 115 aa0.59□□□□□ -2.31
SCARNA4.1-201ENST00000628597 H3BMG7 143 aa0.59□□□□□ -2.31
SCARNA4.1-201ENST00000628597 UMAD1C9J7I0 102 aa0.58□□□□□ -2.32
SCARNA4.1-201ENST00000628597 K7EP34 96 aa0.58□□□□□ -2.32
SCARNA4.1-201ENST00000628597 TRACP01848 142 aa0.58□□□□□ -2.32
SCARNA4.1-201ENST00000628597 H2BFSP57053 126 aa0.58□□□□□ -2.32
SCARNA4.1-201ENST00000628597 TMEM254Q8TBM7 123 aa0.58□□□□□ -2.32
SCARNA4.1-201ENST00000628597 S100A5P33763 92 aa0.57□□□□□ -2.32
SCARNA4.1-201ENST00000628597 CEBPGP53567 150 aa0.57□□□□□ -2.32
SCARNA4.1-201ENST00000628597 ANKRD29Q8N6D5 301 aa0.57□□□□□ -2.32
SCARNA4.1-201ENST00000628597 LINC00308Q8TCZ7 52 aa0.57□□□□□ -2.32
SCARNA4.1-201ENST00000628597 Q9H521 79 aa0.57□□□□□ -2.32
SCARNA4.1-201ENST00000628597 V9GYH0 126 aa0.57□□□□□ -2.32
SCARNA4.1-201ENST00000628597 V9GYV3 84 aa0.57□□□□□ -2.32
SCARNA4.1-201ENST00000628597 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
SCARNA4.1-201ENST00000628597 PSPHP1O15172 72 aa0.56□□□□□ -2.32
SCARNA4.1-201ENST00000628597 SSNA1O43805 119 aa0.56□□□□□ -2.32
SCARNA4.1-201ENST00000628597 KRTAP25-1Q3LHN0 102 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms