RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 DSCR10P59022 87 aa10.89□□□□□ -0.67
PDLIM2-221ENST00000622702 RNF213Q63HN8 5207 aa10.89□□□□□ -0.67
PDLIM2-221ENST00000622702 A0A1B0GVX0 72 aa10.88□□□□□ -0.67
PDLIM2-221ENST00000622702 NDUFB1O75438 58 aa10.88□□□□□ -0.67
PDLIM2-221ENST00000622702 C9orf92A6NGG3 77 aa10.87□□□□□ -0.67
PDLIM2-221ENST00000622702 IGKV3D-7A0A0C4DH55 119 aa10.86□□□□□ -0.67
PDLIM2-221ENST00000622702 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
PDLIM2-221ENST00000622702 PRR15Q8IV56 129 aa10.84□□□□□ -0.67
PDLIM2-221ENST00000622702 K7ERU9 68 aa10.83□□□□□ -0.68
PDLIM2-221ENST00000622702 C8orf87E5RJ46 101 aa10.82□□□□□ -0.68
PDLIM2-221ENST00000622702 LINC00313P59037 77 aa10.82□□□□□ -0.68
PDLIM2-221ENST00000622702 CXCL6P80162 114 aa10.82□□□□□ -0.68
PDLIM2-221ENST00000622702 K7EQZ3 153 aa10.81□□□□□ -0.68
PDLIM2-221ENST00000622702 XP32Q5T750 250 aa10.81□□□□□ -0.68
PDLIM2-221ENST00000622702 NOTCH2NLQ7Z3S9 236 aa10.81□□□□□ -0.68
PDLIM2-221ENST00000622702 LINC00643Q86TS7 51 aa10.79□□□□□ -0.68
PDLIM2-221ENST00000622702 MUC17Q685J3 4493 aa10.79□□□□□ -0.68
PDLIM2-221ENST00000622702 ATP5EP2Q5VTU8 51 aa10.78□□□□□ -0.68
PDLIM2-221ENST00000622702 Q8N9L7 120 aa10.76□□□□□ -0.69
PDLIM2-221ENST00000622702 C8orf17Q9NRJ1 99 aa10.76□□□□□ -0.69
PDLIM2-221ENST00000622702 KRTAP16-1A8MUX0 517 aa10.74□□□□□ -0.69
PDLIM2-221ENST00000622702 MUC2Q02817 5179 aa10.72□□□□□ -0.69
PDLIM2-221ENST00000622702 MMP24-AS1A0A0U1RRL7 71 aa10.71□□□□□ -0.69
PDLIM2-221ENST00000622702 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
PDLIM2-221ENST00000622702 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
PDLIM2-221ENST00000622702 Q75L30 129 aa10.68□□□□□ -0.7
PDLIM2-221ENST00000622702 A8MUU9 505 aa10.68□□□□□ -0.7
PDLIM2-221ENST00000622702 hDV103S1A0JD37 113 aa10.65□□□□□ -0.7
PDLIM2-221ENST00000622702 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
PDLIM2-221ENST00000622702 SEC61BP60468 96 aaKnown RBP10.63□□□□□ -0.71
PDLIM2-221ENST00000622702 HCG22E2RYF7 251 aa10.62□□□□□ -0.71
PDLIM2-221ENST00000622702 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
PDLIM2-221ENST00000622702 MRPL34Q9BQ48 92 aaKnown RBP10.62□□□□□ -0.71
PDLIM2-221ENST00000622702 CASC2Q6XLA1 102 aa10.61□□□□□ -0.71
PDLIM2-221ENST00000622702 WFDC13Q8IUB5 93 aa10.61□□□□□ -0.71
PDLIM2-221ENST00000622702 HIST1H4AP62805 103 aaKnown RBP10.6□□□□□ -0.71
PDLIM2-221ENST00000622702 PCOTHQ58A44 107 aa10.55□□□□□ -0.72
PDLIM2-221ENST00000622702 ATP11AUNQ6ZP68 121 aa10.55□□□□□ -0.72
PDLIM2-221ENST00000622702 A0A087WVE0 104 aa10.52□□□□□ -0.73
PDLIM2-221ENST00000622702 MT-ATP8P03928 68 aa10.52□□□□□ -0.73
PDLIM2-221ENST00000622702 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
PDLIM2-221ENST00000622702 NDUFS5O43920 106 aa10.49□□□□□ -0.73
PDLIM2-221ENST00000622702 KRTAP4-1Q9BYQ7 146 aa10.49□□□□□ -0.73
PDLIM2-221ENST00000622702 A0A0U1RQV1 116 aa10.47□□□□□ -0.73
PDLIM2-221ENST00000622702 ZCCHC13Q8WW36 166 aaKnown RBP10.47□□□□□ -0.73
PDLIM2-221ENST00000622702 FAT4Q6V0I7 4981 aa10.41□□□□□ -0.74
PDLIM2-221ENST00000622702 TP53AIP1Q9HCN2 124 aa10.4□□□□□ -0.74
PDLIM2-221ENST00000622702 Q5W150 140 aa10.36□□□□□ -0.75
PDLIM2-221ENST00000622702 FAM236AA0A1B0GUQ0 79 aa10.28□□□□□ -0.76
PDLIM2-221ENST00000622702 FAM236BA0A1B0GV22 79 aa10.28□□□□□ -0.76
PDLIM2-221ENST00000622702 UQCRQO14949 82 aa10.28□□□□□ -0.76
PDLIM2-221ENST00000622702 SCGB1A1P11684 91 aa10.28□□□□□ -0.76
PDLIM2-221ENST00000622702 OCR1Q9BZK8 76 aa10.28□□□□□ -0.76
PDLIM2-221ENST00000622702 SPINK7P58062 85 aa10.25□□□□□ -0.77
PDLIM2-221ENST00000622702 TRAV22A0A0B4J277 110 aa10.23□□□□□ -0.77
PDLIM2-221ENST00000622702 LCE2AQ5TA79 106 aaPredicted RBP10.21□□□□□ -0.78
PDLIM2-221ENST00000622702 C7orf65Q6ZTY9 151 aa10.19□□□□□ -0.78
PDLIM2-221ENST00000622702 IGKV2D-30A0A075B6S6 120 aa10.17□□□□□ -0.78
PDLIM2-221ENST00000622702 IGKV2-30P06310 120 aa10.17□□□□□ -0.78
PDLIM2-221ENST00000622702 SMIM20Q8N5G0 67 aa10.17□□□□□ -0.78
PDLIM2-221ENST00000622702 KRTAP19-2Q3LHN2 52 aa10.17□□□□□ -0.78
PDLIM2-221ENST00000622702 H0Y9P7 68 aa10.16□□□□□ -0.78
PDLIM2-221ENST00000622702 ATOX1O00244 68 aa10.16□□□□□ -0.78
PDLIM2-221ENST00000622702 HRES1P13985 223 aa10.16□□□□□ -0.78
PDLIM2-221ENST00000622702 LCE2CQ5TA81 110 aa10.15□□□□□ -0.78
PDLIM2-221ENST00000622702 C5orf47Q569G3 176 aa10.13□□□□□ -0.79
PDLIM2-221ENST00000622702 TRAV7A0A075B6U4 112 aa10.11□□□□□ -0.79
PDLIM2-221ENST00000622702 LOC101927531A0A1B0GV80 90 aa10.11□□□□□ -0.79
PDLIM2-221ENST00000622702 MPLKIPQ8TAP9 179 aa10.11□□□□□ -0.79
PDLIM2-221ENST00000622702 MP68P56378 58 aa10.1□□□□□ -0.79
PDLIM2-221ENST00000622702 CYP4F30PQ9H0H9 118 aa10.08□□□□□ -0.8
PDLIM2-221ENST00000622702 COX6B2Q6YFQ2 88 aa10.06□□□□□ -0.8
PDLIM2-221ENST00000622702 H3BPC8 53 aa10.05□□□□□ -0.8
PDLIM2-221ENST00000622702 C1orf64Q8NEQ6 169 aa10.05□□□□□ -0.8
PDLIM2-221ENST00000622702 LINC00208Q96KT6 92 aa10.05□□□□□ -0.8
PDLIM2-221ENST00000622702 RBM12B-AS1Q9P1G2 102 aa10.05□□□□□ -0.8
PDLIM2-221ENST00000622702 SERP2Q8N6R1 65 aa10.02□□□□□ -0.81
PDLIM2-221ENST00000622702 MT1HP80294 61 aa10□□□□□ -0.81
PDLIM2-221ENST00000622702 FAM236DA0A1B0GTK5 79 aa9.96□□□□□ -0.82
PDLIM2-221ENST00000622702 FAM236CP0DP71 79 aa9.96□□□□□ -0.82
PDLIM2-221ENST00000622702 C4orf26Q17RF5 130 aa9.94□□□□□ -0.82
PDLIM2-221ENST00000622702 FLGP20930 4061 aaPredicted RBP9.93□□□□□ -0.82
PDLIM2-221ENST00000622702 KLKP1Q107X0 134 aa9.9□□□□□ -0.83
PDLIM2-221ENST00000622702 COX7CP15954 63 aa9.88□□□□□ -0.83
PDLIM2-221ENST00000622702 M0R2T5 61 aa9.87□□□□□ -0.83
PDLIM2-221ENST00000622702 C20orf197Q8N268 126 aa9.85□□□□□ -0.83
PDLIM2-221ENST00000622702 ANAPC13Q9BS18 74 aa9.85□□□□□ -0.83
PDLIM2-221ENST00000622702 SNURFQ9Y675 71 aa9.84□□□□□ -0.83
PDLIM2-221ENST00000622702 KRTAP3-1Q9BYR8 98 aa9.83□□□□□ -0.84
PDLIM2-221ENST00000622702 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
PDLIM2-221ENST00000622702 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
PDLIM2-221ENST00000622702 LORP23490 312 aaPredicted RBP9.74□□□□□ -0.85
PDLIM2-221ENST00000622702 A8MUN3 132 aa9.72□□□□□ -0.85
PDLIM2-221ENST00000622702 KRTAP9-2Q9BYQ4 174 aa9.69□□□□□ -0.86
PDLIM2-221ENST00000622702 DMAC1Q96GE9 116 aa9.66□□□□□ -0.86
PDLIM2-221ENST00000622702 NDUFC1O43677 76 aa9.66□□□□□ -0.86
PDLIM2-221ENST00000622702 SPANXA2-OT1Q8N9U9 137 aa9.65□□□□□ -0.87
PDLIM2-221ENST00000622702 CCDC179H3BU77 68 aa9.63□□□□□ -0.87
PDLIM2-221ENST00000622702 CYSTM1Q9H1C7 97 aa9.62□□□□□ -0.87
PDLIM2-221ENST00000622702 S4R3F8 94 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms