RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 DSCR10P59022 87 aa10.02□□□□□ -0.81
CIRBP-245ENST00000621399 NREPQ16612 68 aa10.02□□□□□ -0.81
CIRBP-245ENST00000621399 RPL37P61927 97 aaKnown RBP10.01□□□□□ -0.81
CIRBP-245ENST00000621399 LINC00313P59037 77 aa10□□□□□ -0.81
CIRBP-245ENST00000621399 IGHV6-1A0A0B4J1U7 121 aa9.99□□□□□ -0.81
CIRBP-245ENST00000621399 PCOTHQ58A44 107 aa9.99□□□□□ -0.81
CIRBP-245ENST00000621399 A0A1B0GVX0 72 aa9.97□□□□□ -0.81
CIRBP-245ENST00000621399 ETDBQ3ZM63 59 aa9.96□□□□□ -0.82
CIRBP-245ENST00000621399 NDUFB1O75438 58 aa9.95□□□□□ -0.82
CIRBP-245ENST00000621399 Q75L30 129 aa9.95□□□□□ -0.82
CIRBP-245ENST00000621399 NOTCH2NLQ7Z3S9 236 aa9.94□□□□□ -0.82
CIRBP-245ENST00000621399 A8MWP4 228 aa9.92□□□□□ -0.82
CIRBP-245ENST00000621399 C8orf87E5RJ46 101 aa9.92□□□□□ -0.82
CIRBP-245ENST00000621399 LCE2AQ5TA79 106 aaPredicted RBP9.92□□□□□ -0.82
CIRBP-245ENST00000621399 A0A1B0GV90 55 aa9.91□□□□□ -0.82
CIRBP-245ENST00000621399 C20orf166-AS1Q96NR2 134 aa9.91□□□□□ -0.82
CIRBP-245ENST00000621399 KRTAP4-1Q9BYQ7 146 aa9.91□□□□□ -0.82
CIRBP-245ENST00000621399 A8MUU9 505 aa9.9□□□□□ -0.82
CIRBP-245ENST00000621399 ATP11AUNQ6ZP68 121 aa9.9□□□□□ -0.82
CIRBP-245ENST00000621399 KRTAP16-1A8MUX0 517 aa9.89□□□□□ -0.83
CIRBP-245ENST00000621399 Q6ZVQ6 151 aa9.89□□□□□ -0.83
CIRBP-245ENST00000621399 IGKV3D-7A0A0C4DH55 119 aa9.88□□□□□ -0.83
CIRBP-245ENST00000621399 BPY2O14599 106 aa9.87□□□□□ -0.83
CIRBP-245ENST00000621399 LINC00846Q9NV44 126 aa9.87□□□□□ -0.83
CIRBP-245ENST00000621399 A0A0U1RQV1 116 aa9.86□□□□□ -0.83
CIRBP-245ENST00000621399 PRR15Q8IV56 129 aa9.85□□□□□ -0.83
CIRBP-245ENST00000621399 UBL5Q9BZL1 73 aa9.85□□□□□ -0.83
CIRBP-245ENST00000621399 KRTAP9-2Q9BYQ4 174 aa9.84□□□□□ -0.83
CIRBP-245ENST00000621399 C8orf17Q9NRJ1 99 aa9.83□□□□□ -0.84
CIRBP-245ENST00000621399 FAT4Q6V0I7 4981 aa9.81□□□□□ -0.84
CIRBP-245ENST00000621399 K7EQZ3 153 aa9.8□□□□□ -0.84
CIRBP-245ENST00000621399 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
CIRBP-245ENST00000621399 MMP24-AS1A0A0U1RRL7 71 aa9.74□□□□□ -0.85
CIRBP-245ENST00000621399 Q8N9L7 120 aa9.74□□□□□ -0.85
CIRBP-245ENST00000621399 ACYP1P07311 99 aa9.72□□□□□ -0.85
CIRBP-245ENST00000621399 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
CIRBP-245ENST00000621399 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
CIRBP-245ENST00000621399 TMEM254Q8TBM7 123 aa9.7□□□□□ -0.86
CIRBP-245ENST00000621399 MRPL34Q9BQ48 92 aaKnown RBP9.69□□□□□ -0.86
CIRBP-245ENST00000621399 FAM240AA0A1B0GVK7 77 aa9.67□□□□□ -0.86
CIRBP-245ENST00000621399 ZCCHC13Q8WW36 166 aaKnown RBP9.66□□□□□ -0.86
CIRBP-245ENST00000621399 CXCL6P80162 114 aa9.65□□□□□ -0.86
CIRBP-245ENST00000621399 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.86
CIRBP-245ENST00000621399 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
CIRBP-245ENST00000621399 KRTAP9-6A0A140TA67 174 aa9.63□□□□□ -0.87
CIRBP-245ENST00000621399 NDUFS5O43920 106 aa9.62□□□□□ -0.87
CIRBP-245ENST00000621399 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
CIRBP-245ENST00000621399 HCG22E2RYF7 251 aa9.59□□□□□ -0.87
CIRBP-245ENST00000621399 COX6B2Q6YFQ2 88 aa9.57□□□□□ -0.88
CIRBP-245ENST00000621399 LORP23490 312 aaPredicted RBP9.55□□□□□ -0.88
CIRBP-245ENST00000621399 J3QR89 54 aa9.54□□□□□ -0.88
CIRBP-245ENST00000621399 ATP5EP2Q5VTU8 51 aa9.54□□□□□ -0.88
CIRBP-245ENST00000621399 SPINK7P58062 85 aa9.52□□□□□ -0.89
CIRBP-245ENST00000621399 LINC00643Q86TS7 51 aa9.5□□□□□ -0.89
CIRBP-245ENST00000621399 HIST1H4AP62805 103 aaKnown RBP9.47□□□□□ -0.89
CIRBP-245ENST00000621399 HRES1P13985 223 aa9.46□□□□□ -0.9
CIRBP-245ENST00000621399 Q5W150 140 aa9.46□□□□□ -0.9
CIRBP-245ENST00000621399 MT1HP80294 61 aa9.44□□□□□ -0.9
CIRBP-245ENST00000621399 RBM12B-AS1Q9P1G2 102 aa9.44□□□□□ -0.9
CIRBP-245ENST00000621399 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
CIRBP-245ENST00000621399 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
CIRBP-245ENST00000621399 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
CIRBP-245ENST00000621399 TP53AIP1Q9HCN2 124 aa9.4□□□□□ -0.9
CIRBP-245ENST00000621399 IGKV2D-30A0A075B6S6 120 aa9.38□□□□□ -0.91
CIRBP-245ENST00000621399 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
CIRBP-245ENST00000621399 FLGP20930 4061 aaPredicted RBP9.36□□□□□ -0.91
CIRBP-245ENST00000621399 M0R2T5 61 aa9.36□□□□□ -0.91
CIRBP-245ENST00000621399 A0A087WVE0 104 aa9.35□□□□□ -0.91
CIRBP-245ENST00000621399 K7ERU9 68 aa9.34□□□□□ -0.91
CIRBP-245ENST00000621399 C7orf65Q6ZTY9 151 aa9.34□□□□□ -0.91
CIRBP-245ENST00000621399 FSIP2Q5CZC0 6907 aa9.27□□□□□ -0.93
CIRBP-245ENST00000621399 TRAV22A0A0B4J277 110 aa9.22□□□□□ -0.93
CIRBP-245ENST00000621399 UQCRQO14949 82 aa9.22□□□□□ -0.93
CIRBP-245ENST00000621399 CRCT1Q9UGL9 99 aa9.22□□□□□ -0.93
CIRBP-245ENST00000621399 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
CIRBP-245ENST00000621399 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
CIRBP-245ENST00000621399 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
CIRBP-245ENST00000621399 H0Y9P7 68 aa9.15□□□□□ -0.94
CIRBP-245ENST00000621399 IMUPQ9GZP8 106 aa9.15□□□□□ -0.94
CIRBP-245ENST00000621399 LOC101927531A0A1B0GV80 90 aa9.14□□□□□ -0.95
CIRBP-245ENST00000621399 ATOX1O00244 68 aa9.13□□□□□ -0.95
CIRBP-245ENST00000621399 SCGB1A1P11684 91 aa9.13□□□□□ -0.95
CIRBP-245ENST00000621399 H1FX-AS1Q4G0G2 97 aa9.13□□□□□ -0.95
CIRBP-245ENST00000621399 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
CIRBP-245ENST00000621399 OCR1Q9BZK8 76 aa9.12□□□□□ -0.95
CIRBP-245ENST00000621399 MP68P56378 58 aa9.06□□□□□ -0.96
CIRBP-245ENST00000621399 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
CIRBP-245ENST00000621399 C5orf47Q569G3 176 aa9.04□□□□□ -0.96
CIRBP-245ENST00000621399 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
CIRBP-245ENST00000621399 KRTAP3-1Q9BYR8 98 aa9.02□□□□□ -0.97
CIRBP-245ENST00000621399 FAM236AA0A1B0GUQ0 79 aa9□□□□□ -0.97
CIRBP-245ENST00000621399 FAM236BA0A1B0GV22 79 aa9□□□□□ -0.97
CIRBP-245ENST00000621399 KRTAP9-8Q9BYQ0 159 aa8.99□□□□□ -0.97
CIRBP-245ENST00000621399 H3BPC8 53 aa8.95□□□□□ -0.98
CIRBP-245ENST00000621399 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
CIRBP-245ENST00000621399 KLKP1Q107X0 134 aa8.92□□□□□ -0.98
CIRBP-245ENST00000621399 MT2AP02795 61 aa8.91□□□□□ -0.98
CIRBP-245ENST00000621399 S4R3F8 94 aa8.91□□□□□ -0.98
CIRBP-245ENST00000621399 TRAV7A0A075B6U4 112 aa8.9□□□□□ -0.98
CIRBP-245ENST00000621399 LOC100996750A0A140TA64 210 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms