RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 SMIM6P0DI80 62 aa14.79□□□□□ -0.04
SEMA3B-215ENST00000621029 CRCT1Q9UGL9 99 aa14.79□□□□□ -0.04
SEMA3B-215ENST00000621029 J3KT08 172 aa14.77□□□□□ -0.05
SEMA3B-215ENST00000621029 JMJD7-PLA2G4BH0Y9G9 81 aa14.76□□□□□ -0.05
SEMA3B-215ENST00000621029 Q6ZQT0 140 aa14.76□□□□□ -0.05
SEMA3B-215ENST00000621029 FAM236DA0A1B0GTK5 79 aa14.73□□□□□ -0.05
SEMA3B-215ENST00000621029 FAM236CP0DP71 79 aa14.73□□□□□ -0.05
SEMA3B-215ENST00000621029 BATFQ16520 125 aa14.71□□□□□ -0.05
SEMA3B-215ENST00000621029 LYRM7Q5U5X0 104 aa14.7□□□□□ -0.06
SEMA3B-215ENST00000621029 NDUFB1O75438 58 aa14.69□□□□□ -0.06
SEMA3B-215ENST00000621029 TSTD3H0UI37 97 aa14.68□□□□□ -0.06
SEMA3B-215ENST00000621029 LOC110117498A0A087WWA1 95 aa14.67□□□□□ -0.06
SEMA3B-215ENST00000621029 RBM12B-AS1Q9P1G2 102 aa14.66□□□□□ -0.06
SEMA3B-215ENST00000621029 PDE6GP18545 87 aa14.65□□□□□ -0.06
SEMA3B-215ENST00000621029 C14orf132Q9NPU4 83 aa14.64□□□□□ -0.07
SEMA3B-215ENST00000621029 A0A1B0GW54 56 aa14.61□□□□□ -0.07
SEMA3B-215ENST00000621029 HRES1P13985 223 aa14.59□□□□□ -0.07
SEMA3B-215ENST00000621029 ZCCHC13Q8WW36 166 aaKnown RBP14.58□□□□□ -0.08
SEMA3B-215ENST00000621029 A8MWP4 228 aa14.56□□□□□ -0.08
SEMA3B-215ENST00000621029 C8orf17Q9NRJ1 99 aa14.53□□□□□ -0.08
SEMA3B-215ENST00000621029 NREPQ16612 68 aa14.52□□□□□ -0.09
SEMA3B-215ENST00000621029 MPLKIPQ8TAP9 179 aa14.52□□□□□ -0.09
SEMA3B-215ENST00000621029 IGKV3D-7A0A0C4DH55 119 aa14.5□□□□□ -0.09
SEMA3B-215ENST00000621029 Q8N9P0 234 aaPredicted RBP14.48□□□□□ -0.09
SEMA3B-215ENST00000621029 SPINK7P58062 85 aa14.47□□□□□ -0.09
SEMA3B-215ENST00000621029 C9orf118A6NHY6 69 aa14.46□□□□□ -0.09
SEMA3B-215ENST00000621029 KRTAP9-8Q9BYQ0 159 aa14.46□□□□□ -0.09
SEMA3B-215ENST00000621029 MTURNQ8N3F0 131 aa14.45□□□□□ -0.1
SEMA3B-215ENST00000621029 Q6ZVQ6 151 aa14.42□□□□□ -0.1
SEMA3B-215ENST00000621029 A0A1W2PPM0 123 aa14.41□□□□□ -0.1
SEMA3B-215ENST00000621029 H3BT86 120 aa14.41□□□□□ -0.1
SEMA3B-215ENST00000621029 PRR15Q8IV56 129 aa14.41□□□□□ -0.1
SEMA3B-215ENST00000621029 LOC105371267A0A1B0GV96 52 aa14.4□□□□□ -0.1
SEMA3B-215ENST00000621029 TAX1BP3O14907 124 aa14.4□□□□□ -0.1
SEMA3B-215ENST00000621029 MMP24-AS1A0A0U1RRL7 71 aa14.29□□□□□ -0.12
SEMA3B-215ENST00000621029 MT2AP02795 61 aa14.29□□□□□ -0.12
SEMA3B-215ENST00000621029 TMEM254Q8TBM7 123 aa14.29□□□□□ -0.12
SEMA3B-215ENST00000621029 MRPL34Q9BQ48 92 aaKnown RBP14.29□□□□□ -0.12
SEMA3B-215ENST00000621029 WFDC13Q8IUB5 93 aa14.28□□□□□ -0.12
SEMA3B-215ENST00000621029 K7EQZ3 153 aa14.27□□□□□ -0.13
SEMA3B-215ENST00000621029 NDUFS5O43920 106 aa14.26□□□□□ -0.13
SEMA3B-215ENST00000621029 hDV103S1A0JD37 113 aa14.24□□□□□ -0.13
SEMA3B-215ENST00000621029 BPY2O14599 106 aa14.24□□□□□ -0.13
SEMA3B-215ENST00000621029 SPCS1Q9Y6A9 102 aa14.23□□□□□ -0.13
SEMA3B-215ENST00000621029 KRTAP10-10P60014 251 aa14.19□□□□□ -0.14
SEMA3B-215ENST00000621029 MT1FP04733 61 aa14.17□□□□□ -0.14
SEMA3B-215ENST00000621029 USH2AO75445 5202 aa14.16□□□□□ -0.14
SEMA3B-215ENST00000621029 Q8N9L7 120 aa14.09□□□□□ -0.15
SEMA3B-215ENST00000621029 SMCPP49901 116 aaPredicted RBP14.07□□□□□ -0.16
SEMA3B-215ENST00000621029 COL5A1-AS1Q5SY13 56 aa14.07□□□□□ -0.16
SEMA3B-215ENST00000621029 IGKV2D-30A0A075B6S6 120 aa14.04□□□□□ -0.16
SEMA3B-215ENST00000621029 IGKV2-30P06310 120 aa14.04□□□□□ -0.16
SEMA3B-215ENST00000621029 CASC2Q6XLA1 102 aa14.04□□□□□ -0.16
SEMA3B-215ENST00000621029 SSPOA2VEC9 5147 aa14.01□□□□□ -0.17
SEMA3B-215ENST00000621029 KRTAP9-3Q9BYQ3 159 aa14□□□□□ -0.17
SEMA3B-215ENST00000621029 HCG22E2RYF7 251 aa13.97□□□□□ -0.17
SEMA3B-215ENST00000621029 Q5W150 140 aa13.97□□□□□ -0.17
SEMA3B-215ENST00000621029 UBL5Q9BZL1 73 aa13.97□□□□□ -0.17
SEMA3B-215ENST00000621029 LCE2BO14633 110 aa13.96□□□□□ -0.17
SEMA3B-215ENST00000621029 K7EP34 96 aa13.95□□□□□ -0.18
SEMA3B-215ENST00000621029 H1FX-AS1Q4G0G2 97 aa13.95□□□□□ -0.18
SEMA3B-215ENST00000621029 C7orf65Q6ZTY9 151 aa13.95□□□□□ -0.18
SEMA3B-215ENST00000621029 LINC00846Q9NV44 126 aa13.94□□□□□ -0.18
SEMA3B-215ENST00000621029 PRO0461Q9UI25 63 aa13.94□□□□□ -0.18
SEMA3B-215ENST00000621029 CXCL6P80162 114 aa13.86□□□□□ -0.19
SEMA3B-215ENST00000621029 GTF2H5Q6ZYL4 71 aa13.81□□□□□ -0.2
SEMA3B-215ENST00000621029 C4orf26Q17RF5 130 aa13.77□□□□□ -0.21
SEMA3B-215ENST00000621029 KRTAP19-1Q8IUB9 90 aa13.77□□□□□ -0.21
SEMA3B-215ENST00000621029 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.75□□□□□ -0.21
SEMA3B-215ENST00000621029 FCGBPQ9Y6R7 5405 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-215ENST00000621029 PCP4L1A6NKN8 68 aa13.73□□□□□ -0.21
SEMA3B-215ENST00000621029 F8W1H4 67 aa13.7□□□□□ -0.22
SEMA3B-215ENST00000621029 ETDBQ3ZM63 59 aa13.66□□□□□ -0.22
SEMA3B-215ENST00000621029 KRTAP9-7A8MTY7 169 aa13.61□□□□□ -0.23
SEMA3B-215ENST00000621029 TP53AIP1Q9HCN2 124 aa13.59□□□□□ -0.23
SEMA3B-215ENST00000621029 C5orf47Q569G3 176 aa13.53□□□□□ -0.24
SEMA3B-215ENST00000621029 C1orf64Q8NEQ6 169 aa13.51□□□□□ -0.25
SEMA3B-215ENST00000621029 KRTAP19-6Q3LI70 58 aa13.47□□□□□ -0.25
SEMA3B-215ENST00000621029 KRTAP3-1Q9BYR8 98 aa13.47□□□□□ -0.25
SEMA3B-215ENST00000621029 S4R3F8 94 aa13.47□□□□□ -0.25
SEMA3B-215ENST00000621029 FAM236AA0A1B0GUQ0 79 aa13.41□□□□□ -0.26
SEMA3B-215ENST00000621029 FAM236BA0A1B0GV22 79 aa13.41□□□□□ -0.26
SEMA3B-215ENST00000621029 CSAG1Q6PB30 78 aa13.38□□□□□ -0.27
SEMA3B-215ENST00000621029 ACYP1P07311 99 aa13.37□□□□□ -0.27
SEMA3B-215ENST00000621029 LCA10Q71F78 164 aa13.35□□□□□ -0.27
SEMA3B-215ENST00000621029 MACF1Q9UPN3 7388 aaKnown RBP13.35□□□□□ -0.27
SEMA3B-215ENST00000621029 CYP4F30PQ9H0H9 118 aa13.3□□□□□ -0.28
SEMA3B-215ENST00000621029 TRAV22A0A0B4J277 110 aa13.28□□□□□ -0.28
SEMA3B-215ENST00000621029 HIST1H4AP62805 103 aaKnown RBP13.28□□□□□ -0.28
SEMA3B-215ENST00000621029 SYNE2Q8WXH0 6885 aaKnown RBP13.28□□□□□ -0.28
SEMA3B-215ENST00000621029 ATP5EP2Q5VTU8 51 aa13.25□□□□□ -0.29
SEMA3B-215ENST00000621029 FAM240AA0A1B0GVK7 77 aa13.24□□□□□ -0.29
SEMA3B-215ENST00000621029 LOC101927531A0A1B0GV80 90 aa13.23□□□□□ -0.29
SEMA3B-215ENST00000621029 UQCRQO14949 82 aa13.13□□□□□ -0.31
SEMA3B-215ENST00000621029 H0Y9P7 68 aa13.1□□□□□ -0.31
SEMA3B-215ENST00000621029 KRTAP3-3Q9BYR6 98 aa13.09□□□□□ -0.31
SEMA3B-215ENST00000621029 ATOX1O00244 68 aa13.08□□□□□ -0.32
SEMA3B-215ENST00000621029 A0A087WVE0 104 aa13.06□□□□□ -0.32
SEMA3B-215ENST00000621029 Q5VV11 94 aa13.05□□□□□ -0.32
SEMA3B-215ENST00000621029 KLKP1Q107X0 134 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms