RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SS18L2Q9UHA2 77 aa5.26□□□□□ -1.57
SMAD4-217ENST00000611848 TRAV7A0A075B6U4 112 aa5.25□□□□□ -1.57
SMAD4-217ENST00000611848 PRR26Q8N8Z3 221 aa5.24□□□□□ -1.57
SMAD4-217ENST00000611848 ZNF706Q9Y5V0 76 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-217ENST00000611848 FAM229BQ4G0N7 80 aa5.23□□□□□ -1.57
SMAD4-217ENST00000611848 Q8N9L7 120 aa5.23□□□□□ -1.57
SMAD4-217ENST00000611848 CYSTM1Q9H1C7 97 aa5.22□□□□□ -1.57
SMAD4-217ENST00000611848 A0A0G2JQZ4 141 aa5.21□□□□□ -1.58
SMAD4-217ENST00000611848 DSCR10P59022 87 aa5.21□□□□□ -1.58
SMAD4-217ENST00000611848 A0A087X002 238 aa5.2□□□□□ -1.58
SMAD4-217ENST00000611848 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
SMAD4-217ENST00000611848 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
SMAD4-217ENST00000611848 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
SMAD4-217ENST00000611848 ANAPC11Q9NYG5 84 aa5.2□□□□□ -1.58
SMAD4-217ENST00000611848 LINC00483Q53H64 154 aa5.19□□□□□ -1.58
SMAD4-217ENST00000611848 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
SMAD4-217ENST00000611848 TYMSOSQ8TAI1 123 aa5.19□□□□□ -1.58
SMAD4-217ENST00000611848 A0A087WSZ3 146 aa5.18□□□□□ -1.58
SMAD4-217ENST00000611848 C20orf197Q8N268 126 aa5.18□□□□□ -1.58
SMAD4-217ENST00000611848 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
SMAD4-217ENST00000611848 TMEM258P61165 79 aa5.17□□□□□ -1.58
SMAD4-217ENST00000611848 KLKP1Q107X0 134 aa5.17□□□□□ -1.58
SMAD4-217ENST00000611848 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
SMAD4-217ENST00000611848 K7EQZ3 153 aa5.16□□□□□ -1.58
SMAD4-217ENST00000611848 LINC00472Q9H8W2 130 aa5.15□□□□□ -1.59
SMAD4-217ENST00000611848 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
SMAD4-217ENST00000611848 H7BZZ5 65 aa5.13□□□□□ -1.59
SMAD4-217ENST00000611848 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
SMAD4-217ENST00000611848 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
SMAD4-217ENST00000611848 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
SMAD4-217ENST00000611848 DEFB116Q30KQ4 102 aa5.12□□□□□ -1.59
SMAD4-217ENST00000611848 HMCN2Q8NDA2 5059 aa5.12□□□□□ -1.59
SMAD4-217ENST00000611848 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
SMAD4-217ENST00000611848 NDUFC1O43677 76 aa5.12□□□□□ -1.59
SMAD4-217ENST00000611848 SSBP3-AS1Q7Z2R9 100 aa5.12□□□□□ -1.59
SMAD4-217ENST00000611848 TMEM254Q8TBM7 123 aa5.12□□□□□ -1.59
SMAD4-217ENST00000611848 A8MWP4 228 aa5.11□□□□□ -1.59
SMAD4-217ENST00000611848 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
SMAD4-217ENST00000611848 SNURFQ9Y675 71 aa5.11□□□□□ -1.59
SMAD4-217ENST00000611848 A0A0U1RQV1 116 aa5.1□□□□□ -1.59
SMAD4-217ENST00000611848 J3KT08 172 aa5.1□□□□□ -1.59
SMAD4-217ENST00000611848 PRR15Q8IV56 129 aa5.1□□□□□ -1.59
SMAD4-217ENST00000611848 MOBPQ13875 183 aa5.09□□□□□ -1.59
SMAD4-217ENST00000611848 Q96NJ1 140 aa5.08□□□□□ -1.6
SMAD4-217ENST00000611848 FAM236DA0A1B0GTK5 79 aa5.07□□□□□ -1.6
SMAD4-217ENST00000611848 SPINK1P00995 79 aa5.07□□□□□ -1.6
SMAD4-217ENST00000611848 FAM236CP0DP71 79 aa5.07□□□□□ -1.6
SMAD4-217ENST00000611848 C5orf47Q569G3 176 aa5.06□□□□□ -1.6
SMAD4-217ENST00000611848 RPS29P62273 56 aaKnown RBP5.05□□□□□ -1.6
SMAD4-217ENST00000611848 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
SMAD4-217ENST00000611848 WFDC13Q8IUB5 93 aa5.05□□□□□ -1.6
SMAD4-217ENST00000611848 ZCCHC13Q8WW36 166 aaKnown RBP5.05□□□□□ -1.6
SMAD4-217ENST00000611848 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
SMAD4-217ENST00000611848 MMP24-AS1A0A0U1RRL7 71 aa5.04□□□□□ -1.6
SMAD4-217ENST00000611848 NDUFB1O75438 58 aa5.04□□□□□ -1.6
SMAD4-217ENST00000611848 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
SMAD4-217ENST00000611848 CD164Q04900 197 aa5.04□□□□□ -1.6
SMAD4-217ENST00000611848 PRR4Q16378 134 aa5.04□□□□□ -1.6
SMAD4-217ENST00000611848 HRCT1Q6UXD1 115 aa5.04□□□□□ -1.6
SMAD4-217ENST00000611848 LRP2P98164 4655 aa5.03□□□□□ -1.6
SMAD4-217ENST00000611848 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
SMAD4-217ENST00000611848 SERP1Q9Y6X1 66 aa5.01□□□□□ -1.61
SMAD4-217ENST00000611848 RETNLBQ9BQ08 111 aa5.01□□□□□ -1.61
SMAD4-217ENST00000611848 LPAP08519 4548 aa5□□□□□ -1.61
SMAD4-217ENST00000611848 A0A1B0GVX0 72 aa5□□□□□ -1.61
SMAD4-217ENST00000611848 hDV103S1A0JD37 113 aa5□□□□□ -1.61
SMAD4-217ENST00000611848 H3BPC8 53 aa4.99□□□□□ -1.61
SMAD4-217ENST00000611848 MP68P56378 58 aa4.99□□□□□ -1.61
SMAD4-217ENST00000611848 FP248Q71RG6 208 aaPredicted RBP4.99□□□□□ -1.61
SMAD4-217ENST00000611848 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
SMAD4-217ENST00000611848 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
SMAD4-217ENST00000611848 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
SMAD4-217ENST00000611848 IGLV7-46A0A075B6I9 117 aa4.97□□□□□ -1.61
SMAD4-217ENST00000611848 H0Y9P7 68 aa4.97□□□□□ -1.61
SMAD4-217ENST00000611848 Q5XG85 94 aa4.97□□□□□ -1.61
SMAD4-217ENST00000611848 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
SMAD4-217ENST00000611848 TP53AIP1Q9HCN2 124 aa4.97□□□□□ -1.61
SMAD4-217ENST00000611848 IGHV6-1A0A0B4J1U7 121 aa4.96□□□□□ -1.62
SMAD4-217ENST00000611848 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
SMAD4-217ENST00000611848 TRAV22A0A0B4J277 110 aa4.95□□□□□ -1.62
SMAD4-217ENST00000611848 TPRXLQ17RH7 258 aa4.95□□□□□ -1.62
SMAD4-217ENST00000611848 LINC00208Q96KT6 92 aa4.94□□□□□ -1.62
SMAD4-217ENST00000611848 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
SMAD4-217ENST00000611848 NOTCH2NLQ7Z3S9 236 aa4.93□□□□□ -1.62
SMAD4-217ENST00000611848 CYP4F30PQ9H0H9 118 aa4.93□□□□□ -1.62
SMAD4-217ENST00000611848 C1orf64Q8NEQ6 169 aa4.92□□□□□ -1.62
SMAD4-217ENST00000611848 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
SMAD4-217ENST00000611848 C8orf87E5RJ46 101 aa4.91□□□□□ -1.62
SMAD4-217ENST00000611848 KRTAP13-3Q3SY46 172 aa4.9□□□□□ -1.62
SMAD4-217ENST00000611848 C1orf195Q5TG92 126 aa4.9□□□□□ -1.62
SMAD4-217ENST00000611848 SPANXA2-OT1Q8N9U9 137 aa4.9□□□□□ -1.62
SMAD4-217ENST00000611848 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
SMAD4-217ENST00000611848 NDUFS5O43920 106 aa4.87□□□□□ -1.63
SMAD4-217ENST00000611848 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
SMAD4-217ENST00000611848 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
SMAD4-217ENST00000611848 LINC00313P59037 77 aa4.86□□□□□ -1.63
SMAD4-217ENST00000611848 C4orf26Q17RF5 130 aa4.86□□□□□ -1.63
SMAD4-217ENST00000611848 Q8N9P0 234 aaPredicted RBP4.85□□□□□ -1.63
SMAD4-217ENST00000611848 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
SMAD4-217ENST00000611848 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms