RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 HRES1P13985 223 aa11.38□□□□□ -0.59
SSBP4-209ENST00000601357 C21orf62-AS1Q17RA5 79 aa11.37□□□□□ -0.59
SSBP4-209ENST00000601357 Q6ZQT0 140 aa11.36□□□□□ -0.59
SSBP4-209ENST00000601357 J3KT08 172 aa11.35□□□□□ -0.59
SSBP4-209ENST00000601357 M0R143 59 aa11.32□□□□□ -0.6
SSBP4-209ENST00000601357 FAM236DA0A1B0GTK5 79 aa11.31□□□□□ -0.6
SSBP4-209ENST00000601357 FAM236CP0DP71 79 aa11.31□□□□□ -0.6
SSBP4-209ENST00000601357 ATXN8Q156A1 80 aa11.31□□□□□ -0.6
SSBP4-209ENST00000601357 NAA38Q9BRA0 125 aaKnown RBP11.31□□□□□ -0.6
SSBP4-209ENST00000601357 RBM12B-AS1Q9P1G2 102 aa11.31□□□□□ -0.6
SSBP4-209ENST00000601357 LOC105371267A0A1B0GV96 52 aa11.3□□□□□ -0.6
SSBP4-209ENST00000601357 TSTD3H0UI37 97 aa11.29□□□□□ -0.6
SSBP4-209ENST00000601357 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
SSBP4-209ENST00000601357 JMJD7-PLA2G4BH0Y9G9 81 aa11.28□□□□□ -0.6
SSBP4-209ENST00000601357 A0A1B0GW54 56 aa11.26□□□□□ -0.61
SSBP4-209ENST00000601357 ZCCHC13Q8WW36 166 aaKnown RBP11.26□□□□□ -0.61
SSBP4-209ENST00000601357 Q8N9P0 234 aaPredicted RBP11.25□□□□□ -0.61
SSBP4-209ENST00000601357 MT2AP02795 61 aa11.23□□□□□ -0.61
SSBP4-209ENST00000601357 NDUFB1O75438 58 aa11.22□□□□□ -0.61
SSBP4-209ENST00000601357 USH2AO75445 5202 aa11.22□□□□□ -0.61
SSBP4-209ENST00000601357 PDE6GP18545 87 aa11.21□□□□□ -0.61
SSBP4-209ENST00000601357 A8MWP4 228 aa11.2□□□□□ -0.62
SSBP4-209ENST00000601357 SPINK7P58062 85 aa11.18□□□□□ -0.62
SSBP4-209ENST00000601357 C14orf132Q9NPU4 83 aa11.18□□□□□ -0.62
SSBP4-209ENST00000601357 C8orf17Q9NRJ1 99 aa11.18□□□□□ -0.62
SSBP4-209ENST00000601357 IGKV3D-7A0A0C4DH55 119 aa11.17□□□□□ -0.62
SSBP4-209ENST00000601357 SSPOA2VEC9 5147 aa11.15□□□□□ -0.62
SSBP4-209ENST00000601357 MT1FP04733 61 aa11.14□□□□□ -0.63
SSBP4-209ENST00000601357 LYRM7Q5U5X0 104 aa11.14□□□□□ -0.63
SSBP4-209ENST00000601357 MTURNQ8N3F0 131 aa11.13□□□□□ -0.63
SSBP4-209ENST00000601357 BATFQ16520 125 aa11.1□□□□□ -0.63
SSBP4-209ENST00000601357 PRR15Q8IV56 129 aa11.09□□□□□ -0.63
SSBP4-209ENST00000601357 Q6ZVQ6 151 aa11.08□□□□□ -0.64
SSBP4-209ENST00000601357 NREPQ16612 68 aa11.07□□□□□ -0.64
SSBP4-209ENST00000601357 KRTAP9-3Q9BYQ3 159 aa11.06□□□□□ -0.64
SSBP4-209ENST00000601357 KRTAP10-10P60014 251 aa11.04□□□□□ -0.64
SSBP4-209ENST00000601357 LCE2BO14633 110 aa11.03□□□□□ -0.64
SSBP4-209ENST00000601357 MMP24-AS1A0A0U1RRL7 71 aa11.02□□□□□ -0.65
SSBP4-209ENST00000601357 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.65
SSBP4-209ENST00000601357 C9orf118A6NHY6 69 aa11□□□□□ -0.65
SSBP4-209ENST00000601357 H3BT86 120 aa11□□□□□ -0.65
SSBP4-209ENST00000601357 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
SSBP4-209ENST00000601357 MRPL34Q9BQ48 92 aaKnown RBP10.98□□□□□ -0.65
SSBP4-209ENST00000601357 A0A1W2PPM0 123 aa10.96□□□□□ -0.65
SSBP4-209ENST00000601357 K7EQZ3 153 aa10.96□□□□□ -0.65
SSBP4-209ENST00000601357 TAX1BP3O14907 124 aa10.96□□□□□ -0.65
SSBP4-209ENST00000601357 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.93□□□□□ -0.66
SSBP4-209ENST00000601357 hDV103S1A0JD37 113 aa10.92□□□□□ -0.66
SSBP4-209ENST00000601357 FCGBPQ9Y6R7 5405 aaPredicted RBP10.9□□□□□ -0.66
SSBP4-209ENST00000601357 BPY2O14599 106 aa10.86□□□□□ -0.67
SSBP4-209ENST00000601357 KRTAP19-1Q8IUB9 90 aa10.86□□□□□ -0.67
SSBP4-209ENST00000601357 NDUFS5O43920 106 aa10.84□□□□□ -0.67
SSBP4-209ENST00000601357 COL5A1-AS1Q5SY13 56 aa10.82□□□□□ -0.68
SSBP4-209ENST00000601357 KRTAP9-7A8MTY7 169 aa10.81□□□□□ -0.68
SSBP4-209ENST00000601357 H1FX-AS1Q4G0G2 97 aa10.79□□□□□ -0.68
SSBP4-209ENST00000601357 Q5W150 140 aa10.79□□□□□ -0.68
SSBP4-209ENST00000601357 PCP4L1A6NKN8 68 aa10.77□□□□□ -0.69
SSBP4-209ENST00000601357 SMCPP49901 116 aaPredicted RBP10.77□□□□□ -0.69
SSBP4-209ENST00000601357 Q8N9L7 120 aa10.77□□□□□ -0.69
SSBP4-209ENST00000601357 SPCS1Q9Y6A9 102 aa10.77□□□□□ -0.69
SSBP4-209ENST00000601357 CASC2Q6XLA1 102 aa10.74□□□□□ -0.69
SSBP4-209ENST00000601357 C7orf65Q6ZTY9 151 aa10.74□□□□□ -0.69
SSBP4-209ENST00000601357 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
SSBP4-209ENST00000601357 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
SSBP4-209ENST00000601357 HCG22E2RYF7 251 aa10.68□□□□□ -0.7
SSBP4-209ENST00000601357 PRO0461Q9UI25 63 aa10.67□□□□□ -0.7
SSBP4-209ENST00000601357 KRTAP19-6Q3LI70 58 aa10.66□□□□□ -0.7
SSBP4-209ENST00000601357 LINC00846Q9NV44 126 aa10.66□□□□□ -0.7
SSBP4-209ENST00000601357 CXCL6P80162 114 aa10.64□□□□□ -0.71
SSBP4-209ENST00000601357 MACF1Q9UPN3 7388 aaKnown RBP10.64□□□□□ -0.71
SSBP4-209ENST00000601357 UBL5Q9BZL1 73 aa10.61□□□□□ -0.71
SSBP4-209ENST00000601357 K7EP34 96 aa10.6□□□□□ -0.71
SSBP4-209ENST00000601357 C4orf26Q17RF5 130 aa10.59□□□□□ -0.71
SSBP4-209ENST00000601357 GTF2H5Q6ZYL4 71 aa10.59□□□□□ -0.71
SSBP4-209ENST00000601357 KRTAP3-1Q9BYR8 98 aa10.48□□□□□ -0.73
SSBP4-209ENST00000601357 SYNE2Q8WXH0 6885 aaKnown RBP10.47□□□□□ -0.73
SSBP4-209ENST00000601357 F8W1H4 67 aa10.46□□□□□ -0.73
SSBP4-209ENST00000601357 C5orf47Q569G3 176 aa10.41□□□□□ -0.74
SSBP4-209ENST00000601357 TP53AIP1Q9HCN2 124 aa10.4□□□□□ -0.74
SSBP4-209ENST00000601357 C1orf64Q8NEQ6 169 aa10.38□□□□□ -0.75
SSBP4-209ENST00000601357 S4R3F8 94 aa10.37□□□□□ -0.75
SSBP4-209ENST00000601357 ETDBQ3ZM63 59 aa10.35□□□□□ -0.75
SSBP4-209ENST00000601357 LCA10Q71F78 164 aa10.33□□□□□ -0.76
SSBP4-209ENST00000601357 CSAG1Q6PB30 78 aa10.31□□□□□ -0.76
SSBP4-209ENST00000601357 FAM236AA0A1B0GUQ0 79 aa10.27□□□□□ -0.77
SSBP4-209ENST00000601357 FAM236BA0A1B0GV22 79 aa10.27□□□□□ -0.77
SSBP4-209ENST00000601357 SPRR2GQ9BYE4 73 aa10.23□□□□□ -0.77
SSBP4-209ENST00000601357 CYP4F30PQ9H0H9 118 aa10.23□□□□□ -0.77
SSBP4-209ENST00000601357 MT1BP07438 61 aa10.21□□□□□ -0.77
SSBP4-209ENST00000601357 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
SSBP4-209ENST00000601357 KRTAP6-3Q3LI67 103 aa10.19□□□□□ -0.78
SSBP4-209ENST00000601357 KRTAP19-8Q3LI54 63 aa10.18□□□□□ -0.78
SSBP4-209ENST00000601357 TRAV22A0A0B4J277 110 aa10.17□□□□□ -0.78
SSBP4-209ENST00000601357 A0A1B0GV90 55 aa10.15□□□□□ -0.78
SSBP4-209ENST00000601357 ACYP1P07311 99 aa10.15□□□□□ -0.78
SSBP4-209ENST00000601357 Q5VV11 94 aa10.15□□□□□ -0.78
SSBP4-209ENST00000601357 LOC101927531A0A1B0GV80 90 aa10.13□□□□□ -0.79
SSBP4-209ENST00000601357 KLKP1Q107X0 134 aa10.13□□□□□ -0.79
SSBP4-209ENST00000601357 A0A087WVE0 104 aa10.1□□□□□ -0.79
SSBP4-209ENST00000601357 FAM240AA0A1B0GVK7 77 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms