RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 KRTAP10-6P60371 365 aaPredicted RBP11.63□□□□□ -0.55
CCDC9-204ENST00000599398 LCE2DQ5TA82 110 aaPredicted RBP11.63□□□□□ -0.55
CCDC9-204ENST00000599398 TRBV20-1A0A075B6N2 111 aa11.62□□□□□ -0.55
CCDC9-204ENST00000599398 J3KT08 172 aa11.62□□□□□ -0.55
CCDC9-204ENST00000599398 LOC110117498A0A087WWA1 95 aa11.61□□□□□ -0.55
CCDC9-204ENST00000599398 C8orf87E5RJ46 101 aa11.61□□□□□ -0.55
CCDC9-204ENST00000599398 LORP23490 312 aaPredicted RBP11.6□□□□□ -0.55
CCDC9-204ENST00000599398 C14orf132Q9NPU4 83 aa11.6□□□□□ -0.55
CCDC9-204ENST00000599398 PDE6GP18545 87 aa11.58□□□□□ -0.56
CCDC9-204ENST00000599398 A0A1B0GW54 56 aa11.55□□□□□ -0.56
CCDC9-204ENST00000599398 KRTAP9-6A0A140TA67 174 aa11.54□□□□□ -0.56
CCDC9-204ENST00000599398 C9orf118A6NHY6 69 aa11.54□□□□□ -0.56
CCDC9-204ENST00000599398 NDUFB1O75438 58 aa11.54□□□□□ -0.56
CCDC9-204ENST00000599398 TAX1BP3O14907 124 aa11.51□□□□□ -0.57
CCDC9-204ENST00000599398 A0A1W2PPM0 123 aa11.49□□□□□ -0.57
CCDC9-204ENST00000599398 A8MWP4 228 aa11.47□□□□□ -0.57
CCDC9-204ENST00000599398 MTURNQ8N3F0 131 aa11.47□□□□□ -0.57
CCDC9-204ENST00000599398 FAM236DA0A1B0GTK5 79 aa11.46□□□□□ -0.57
CCDC9-204ENST00000599398 H3BT86 120 aa11.46□□□□□ -0.57
CCDC9-204ENST00000599398 FAM236CP0DP71 79 aa11.46□□□□□ -0.57
CCDC9-204ENST00000599398 NREPQ16612 68 aa11.45□□□□□ -0.58
CCDC9-204ENST00000599398 C8orf17Q9NRJ1 99 aa11.44□□□□□ -0.58
CCDC9-204ENST00000599398 IGKV3D-7A0A0C4DH55 119 aa11.43□□□□□ -0.58
CCDC9-204ENST00000599398 ZCCHC13Q8WW36 166 aaKnown RBP11.43□□□□□ -0.58
CCDC9-204ENST00000599398 RBM12B-AS1Q9P1G2 102 aa11.42□□□□□ -0.58
CCDC9-204ENST00000599398 HRES1P13985 223 aa11.4□□□□□ -0.58
CCDC9-204ENST00000599398 Q8N9P0 234 aaPredicted RBP11.39□□□□□ -0.59
CCDC9-204ENST00000599398 PRR15Q8IV56 129 aa11.36□□□□□ -0.59
CCDC9-204ENST00000599398 SPCS1Q9Y6A9 102 aa11.36□□□□□ -0.59
CCDC9-204ENST00000599398 Q6ZVQ6 151 aa11.35□□□□□ -0.59
CCDC9-204ENST00000599398 MPLKIPQ8TAP9 179 aa11.35□□□□□ -0.59
CCDC9-204ENST00000599398 CRCT1Q9UGL9 99 aa11.32□□□□□ -0.6
CCDC9-204ENST00000599398 FSIP2Q5CZC0 6907 aa11.31□□□□□ -0.6
CCDC9-204ENST00000599398 SPINK7P58062 85 aa11.31□□□□□ -0.6
CCDC9-204ENST00000599398 MMP24-AS1A0A0U1RRL7 71 aa11.27□□□□□ -0.61
CCDC9-204ENST00000599398 COL5A1-AS1Q5SY13 56 aa11.27□□□□□ -0.61
CCDC9-204ENST00000599398 K7EQZ3 153 aa11.26□□□□□ -0.61
CCDC9-204ENST00000599398 TMEM254Q8TBM7 123 aa11.25□□□□□ -0.61
CCDC9-204ENST00000599398 MRPL34Q9BQ48 92 aaKnown RBP11.25□□□□□ -0.61
CCDC9-204ENST00000599398 BPY2O14599 106 aa11.24□□□□□ -0.61
CCDC9-204ENST00000599398 hDV103S1A0JD37 113 aa11.22□□□□□ -0.61
CCDC9-204ENST00000599398 SMCPP49901 116 aaPredicted RBP11.22□□□□□ -0.61
CCDC9-204ENST00000599398 KRTAP9-8Q9BYQ0 159 aa11.21□□□□□ -0.61
CCDC9-204ENST00000599398 NDUFS5O43920 106 aa11.2□□□□□ -0.62
CCDC9-204ENST00000599398 WFDC13Q8IUB5 93 aa11.17□□□□□ -0.62
CCDC9-204ENST00000599398 K7EP34 96 aa11.15□□□□□ -0.62
CCDC9-204ENST00000599398 PRO0461Q9UI25 63 aa11.14□□□□□ -0.63
CCDC9-204ENST00000599398 Q8N9L7 120 aa11.13□□□□□ -0.63
CCDC9-204ENST00000599398 MT2AP02795 61 aa11.08□□□□□ -0.64
CCDC9-204ENST00000599398 CASC2Q6XLA1 102 aa11.07□□□□□ -0.64
CCDC9-204ENST00000599398 UBL5Q9BZL1 73 aa11.07□□□□□ -0.64
CCDC9-204ENST00000599398 PCP4L1A6NKN8 68 aa11.06□□□□□ -0.64
CCDC9-204ENST00000599398 LINC00846Q9NV44 126 aa11.06□□□□□ -0.64
CCDC9-204ENST00000599398 GTF2H5Q6ZYL4 71 aa11.04□□□□□ -0.64
CCDC9-204ENST00000599398 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
CCDC9-204ENST00000599398 HCG22E2RYF7 251 aa11.01□□□□□ -0.65
CCDC9-204ENST00000599398 IGKV2-30P06310 120 aa11.01□□□□□ -0.65
CCDC9-204ENST00000599398 MT1FP04733 61 aa11□□□□□ -0.65
CCDC9-204ENST00000599398 Q5W150 140 aa11□□□□□ -0.65
CCDC9-204ENST00000599398 KRTAP10-10P60014 251 aa10.99□□□□□ -0.65
CCDC9-204ENST00000599398 C7orf65Q6ZTY9 151 aa10.97□□□□□ -0.65
CCDC9-204ENST00000599398 F8W1H4 67 aa10.95□□□□□ -0.66
CCDC9-204ENST00000599398 CXCL6P80162 114 aa10.92□□□□□ -0.66
CCDC9-204ENST00000599398 USH2AO75445 5202 aa10.91□□□□□ -0.66
CCDC9-204ENST00000599398 ETDBQ3ZM63 59 aa10.91□□□□□ -0.66
CCDC9-204ENST00000599398 H1FX-AS1Q4G0G2 97 aa10.9□□□□□ -0.66
CCDC9-204ENST00000599398 KRTAP9-3Q9BYQ3 159 aa10.86□□□□□ -0.67
CCDC9-204ENST00000599398 LCE2BO14633 110 aa10.81□□□□□ -0.68
CCDC9-204ENST00000599398 SSPOA2VEC9 5147 aa10.81□□□□□ -0.68
CCDC9-204ENST00000599398 C4orf26Q17RF5 130 aa10.8□□□□□ -0.68
CCDC9-204ENST00000599398 TP53AIP1Q9HCN2 124 aa10.73□□□□□ -0.69
CCDC9-204ENST00000599398 ACYP1P07311 99 aa10.65□□□□□ -0.7
CCDC9-204ENST00000599398 KRTAP19-1Q8IUB9 90 aa10.62□□□□□ -0.71
CCDC9-204ENST00000599398 C1orf64Q8NEQ6 169 aa10.6□□□□□ -0.71
CCDC9-204ENST00000599398 FAM240AA0A1B0GVK7 77 aa10.59□□□□□ -0.71
CCDC9-204ENST00000599398 KRTAP3-1Q9BYR8 98 aa10.59□□□□□ -0.71
CCDC9-204ENST00000599398 C5orf47Q569G3 176 aa10.57□□□□□ -0.72
CCDC9-204ENST00000599398 ATP5EP2Q5VTU8 51 aa10.56□□□□□ -0.72
CCDC9-204ENST00000599398 S4R3F8 94 aa10.56□□□□□ -0.72
CCDC9-204ENST00000599398 FCGBPQ9Y6R7 5405 aaPredicted RBP10.55□□□□□ -0.72
CCDC9-204ENST00000599398 HIST1H4AP62805 103 aaKnown RBP10.54□□□□□ -0.72
CCDC9-204ENST00000599398 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.53□□□□□ -0.72
CCDC9-204ENST00000599398 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
CCDC9-204ENST00000599398 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
CCDC9-204ENST00000599398 LCA10Q71F78 164 aa10.47□□□□□ -0.73
CCDC9-204ENST00000599398 CSAG1Q6PB30 78 aa10.46□□□□□ -0.73
CCDC9-204ENST00000599398 LOC101927531A0A1B0GV80 90 aa10.45□□□□□ -0.74
CCDC9-204ENST00000599398 FAM236AA0A1B0GUQ0 79 aa10.44□□□□□ -0.74
CCDC9-204ENST00000599398 FAM236BA0A1B0GV22 79 aa10.44□□□□□ -0.74
CCDC9-204ENST00000599398 A0A1B0GV90 55 aa10.42□□□□□ -0.74
CCDC9-204ENST00000599398 KRTAP19-6Q3LI70 58 aa10.41□□□□□ -0.74
CCDC9-204ENST00000599398 UQCRQO14949 82 aa10.4□□□□□ -0.74
CCDC9-204ENST00000599398 LINC00643Q86TS7 51 aa10.4□□□□□ -0.74
CCDC9-204ENST00000599398 KRTAP9-7A8MTY7 169 aa10.39□□□□□ -0.75
CCDC9-204ENST00000599398 A0A087WVE0 104 aa10.38□□□□□ -0.75
CCDC9-204ENST00000599398 H0Y9P7 68 aa10.37□□□□□ -0.75
CCDC9-204ENST00000599398 ATOX1O00244 68 aa10.35□□□□□ -0.75
CCDC9-204ENST00000599398 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
CCDC9-204ENST00000599398 LINC00208Q96KT6 92 aa10.21□□□□□ -0.77
CCDC9-204ENST00000599398 J3QR89 54 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms