RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 JMJD7-PLA2G4BH0Y9G9 81 aa9.52□□□□□ -0.89
SHKBP1-202ENST00000593764 LORP23490 312 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-202ENST00000593764 TRBV20-1A0A075B6N2 111 aa9.5□□□□□ -0.89
SHKBP1-202ENST00000593764 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
SHKBP1-202ENST00000593764 KRTAP10-6P60371 365 aaPredicted RBP9.5□□□□□ -0.89
SHKBP1-202ENST00000593764 A0A1B0GVX0 72 aa9.49□□□□□ -0.89
SHKBP1-202ENST00000593764 LYRM7Q5U5X0 104 aa9.49□□□□□ -0.89
SHKBP1-202ENST00000593764 M0R2T5 61 aa9.47□□□□□ -0.89
SHKBP1-202ENST00000593764 J3KT08 172 aa9.46□□□□□ -0.9
SHKBP1-202ENST00000593764 A0A1B0GW54 56 aa9.45□□□□□ -0.9
SHKBP1-202ENST00000593764 C9orf118A6NHY6 69 aa9.45□□□□□ -0.9
SHKBP1-202ENST00000593764 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
SHKBP1-202ENST00000593764 TAX1BP3O14907 124 aa9.45□□□□□ -0.9
SHKBP1-202ENST00000593764 PDE6GP18545 87 aa9.45□□□□□ -0.9
SHKBP1-202ENST00000593764 C14orf132Q9NPU4 83 aa9.45□□□□□ -0.9
SHKBP1-202ENST00000593764 A0A1W2PPM0 123 aa9.4□□□□□ -0.9
SHKBP1-202ENST00000593764 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
SHKBP1-202ENST00000593764 A8MWP4 228 aa9.36□□□□□ -0.91
SHKBP1-202ENST00000593764 H3BT86 120 aa9.36□□□□□ -0.91
SHKBP1-202ENST00000593764 NDUFB1O75438 58 aa9.36□□□□□ -0.91
SHKBP1-202ENST00000593764 MTURNQ8N3F0 131 aa9.36□□□□□ -0.91
SHKBP1-202ENST00000593764 IGKV3D-7A0A0C4DH55 119 aa9.35□□□□□ -0.91
SHKBP1-202ENST00000593764 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
SHKBP1-202ENST00000593764 HRES1P13985 223 aa9.33□□□□□ -0.92
SHKBP1-202ENST00000593764 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
SHKBP1-202ENST00000593764 C8orf17Q9NRJ1 99 aa9.33□□□□□ -0.92
SHKBP1-202ENST00000593764 NREPQ16612 68 aa9.32□□□□□ -0.92
SHKBP1-202ENST00000593764 ZCCHC13Q8WW36 166 aaKnown RBP9.31□□□□□ -0.92
SHKBP1-202ENST00000593764 PRR15Q8IV56 129 aa9.29□□□□□ -0.92
SHKBP1-202ENST00000593764 FSIP2Q5CZC0 6907 aa9.27□□□□□ -0.93
SHKBP1-202ENST00000593764 SPCS1Q9Y6A9 102 aa9.26□□□□□ -0.93
SHKBP1-202ENST00000593764 Q6ZVQ6 151 aa9.25□□□□□ -0.93
SHKBP1-202ENST00000593764 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
SHKBP1-202ENST00000593764 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
SHKBP1-202ENST00000593764 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
SHKBP1-202ENST00000593764 CRCT1Q9UGL9 99 aa9.23□□□□□ -0.93
SHKBP1-202ENST00000593764 SPINK7P58062 85 aa9.22□□□□□ -0.93
SHKBP1-202ENST00000593764 KRTAP9-8Q9BYQ0 159 aa9.22□□□□□ -0.93
SHKBP1-202ENST00000593764 MMP24-AS1A0A0U1RRL7 71 aa9.21□□□□□ -0.94
SHKBP1-202ENST00000593764 COL5A1-AS1Q5SY13 56 aa9.21□□□□□ -0.94
SHKBP1-202ENST00000593764 K7EQZ3 153 aa9.19□□□□□ -0.94
SHKBP1-202ENST00000593764 TMEM254Q8TBM7 123 aa9.17□□□□□ -0.94
SHKBP1-202ENST00000593764 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
SHKBP1-202ENST00000593764 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
SHKBP1-202ENST00000593764 BPY2O14599 106 aa9.15□□□□□ -0.94
SHKBP1-202ENST00000593764 hDV103S1A0JD37 113 aa9.14□□□□□ -0.95
SHKBP1-202ENST00000593764 K7EP34 96 aa9.12□□□□□ -0.95
SHKBP1-202ENST00000593764 Q8N9L7 120 aa9.08□□□□□ -0.96
SHKBP1-202ENST00000593764 MT2AP02795 61 aa9.07□□□□□ -0.96
SHKBP1-202ENST00000593764 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
SHKBP1-202ENST00000593764 LINC00846Q9NV44 126 aa9.06□□□□□ -0.96
SHKBP1-202ENST00000593764 NDUFS5O43920 106 aa9.05□□□□□ -0.96
SHKBP1-202ENST00000593764 Q5W150 140 aa9.02□□□□□ -0.97
SHKBP1-202ENST00000593764 PCP4L1A6NKN8 68 aa9.01□□□□□ -0.97
SHKBP1-202ENST00000593764 MT1FP04733 61 aa9□□□□□ -0.97
SHKBP1-202ENST00000593764 CASC2Q6XLA1 102 aa9□□□□□ -0.97
SHKBP1-202ENST00000593764 UBL5Q9BZL1 73 aa9□□□□□ -0.97
SHKBP1-202ENST00000593764 GTF2H5Q6ZYL4 71 aa8.99□□□□□ -0.97
SHKBP1-202ENST00000593764 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
SHKBP1-202ENST00000593764 F8W1H4 67 aa8.96□□□□□ -0.98
SHKBP1-202ENST00000593764 USH2AO75445 5202 aa8.96□□□□□ -0.98
SHKBP1-202ENST00000593764 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
SHKBP1-202ENST00000593764 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
SHKBP1-202ENST00000593764 IGKV2-30P06310 120 aa8.93□□□□□ -0.98
SHKBP1-202ENST00000593764 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
SHKBP1-202ENST00000593764 KRTAP9-3Q9BYQ3 159 aa8.93□□□□□ -0.98
SHKBP1-202ENST00000593764 ETDBQ3ZM63 59 aa8.92□□□□□ -0.98
SHKBP1-202ENST00000593764 C7orf65Q6ZTY9 151 aa8.91□□□□□ -0.98
SHKBP1-202ENST00000593764 CXCL6P80162 114 aa8.89□□□□□ -0.99
SHKBP1-202ENST00000593764 H1FX-AS1Q4G0G2 97 aa8.89□□□□□ -0.99
SHKBP1-202ENST00000593764 LCE2BO14633 110 aa8.87□□□□□ -0.99
SHKBP1-202ENST00000593764 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
SHKBP1-202ENST00000593764 C4orf26Q17RF5 130 aa8.79□□□□□ -1
SHKBP1-202ENST00000593764 H3BS24 57 aa8.76□□□□□ -1.01
SHKBP1-202ENST00000593764 TP53AIP1Q9HCN2 124 aa8.74□□□□□ -1.01
SHKBP1-202ENST00000593764 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
SHKBP1-202ENST00000593764 ACYP1P07311 99 aa8.7□□□□□ -1.02
SHKBP1-202ENST00000593764 FCGBPQ9Y6R7 5405 aaPredicted RBP8.68□□□□□ -1.02
SHKBP1-202ENST00000593764 FAM240AA0A1B0GVK7 77 aa8.67□□□□□ -1.02
SHKBP1-202ENST00000593764 KRTAP19-1Q8IUB9 90 aa8.67□□□□□ -1.02
SHKBP1-202ENST00000593764 C1orf64Q8NEQ6 169 aa8.63□□□□□ -1.03
SHKBP1-202ENST00000593764 ATP5EP2Q5VTU8 51 aa8.6□□□□□ -1.03
SHKBP1-202ENST00000593764 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.59□□□□□ -1.03
SHKBP1-202ENST00000593764 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
SHKBP1-202ENST00000593764 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
SHKBP1-202ENST00000593764 S4R3F8 94 aa8.57□□□□□ -1.04
SHKBP1-202ENST00000593764 TRAV22A0A0B4J277 110 aa8.55□□□□□ -1.04
SHKBP1-202ENST00000593764 HIST1H4AP62805 103 aaKnown RBP8.55□□□□□ -1.04
SHKBP1-202ENST00000593764 A0A1B0GV90 55 aa8.54□□□□□ -1.04
SHKBP1-202ENST00000593764 LCA10Q71F78 164 aa8.54□□□□□ -1.04
SHKBP1-202ENST00000593764 KRTAP19-6Q3LI70 58 aa8.53□□□□□ -1.04
SHKBP1-202ENST00000593764 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
SHKBP1-202ENST00000593764 LOC101927531A0A1B0GV80 90 aa8.5□□□□□ -1.05
SHKBP1-202ENST00000593764 LINC00643Q86TS7 51 aa8.5□□□□□ -1.05
SHKBP1-202ENST00000593764 A0A087WVE0 104 aa8.48□□□□□ -1.05
SHKBP1-202ENST00000593764 UQCRQO14949 82 aa8.48□□□□□ -1.05
SHKBP1-202ENST00000593764 KRTAP9-7A8MTY7 169 aa8.46□□□□□ -1.06
SHKBP1-202ENST00000593764 H0Y9P7 68 aa8.43□□□□□ -1.06
SHKBP1-202ENST00000593764 FAM236AA0A1B0GUQ0 79 aa8.42□□□□□ -1.06
SHKBP1-202ENST00000593764 FAM236BA0A1B0GV22 79 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms