RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 C8orf87E5RJ46 101 aa7.82□□□□□ -1.16
TRIM28-203ENST00000593582 TSTD3H0UI37 97 aa7.82□□□□□ -1.16
TRIM28-203ENST00000593582 J3KT08 172 aa7.82□□□□□ -1.16
TRIM28-203ENST00000593582 Q6ZQT0 140 aa7.82□□□□□ -1.16
TRIM28-203ENST00000593582 LYRM7Q5U5X0 104 aa7.81□□□□□ -1.16
TRIM28-203ENST00000593582 PDE6GP18545 87 aa7.79□□□□□ -1.16
TRIM28-203ENST00000593582 LOC110117498A0A087WWA1 95 aa7.78□□□□□ -1.16
TRIM28-203ENST00000593582 A0A1B0GW54 56 aa7.78□□□□□ -1.16
TRIM28-203ENST00000593582 BATFQ16520 125 aa7.78□□□□□ -1.16
TRIM28-203ENST00000593582 FSIP2Q5CZC0 6907 aa7.76□□□□□ -1.17
TRIM28-203ENST00000593582 NDUFB1O75438 58 aa7.76□□□□□ -1.17
TRIM28-203ENST00000593582 C14orf132Q9NPU4 83 aa7.75□□□□□ -1.17
TRIM28-203ENST00000593582 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
TRIM28-203ENST00000593582 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
TRIM28-203ENST00000593582 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
TRIM28-203ENST00000593582 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
TRIM28-203ENST00000593582 A8MWP4 228 aa7.71□□□□□ -1.18
TRIM28-203ENST00000593582 C9orf118A6NHY6 69 aa7.69□□□□□ -1.18
TRIM28-203ENST00000593582 HRES1P13985 223 aa7.69□□□□□ -1.18
TRIM28-203ENST00000593582 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
TRIM28-203ENST00000593582 LOC105371267A0A1B0GV96 52 aa7.68□□□□□ -1.18
TRIM28-203ENST00000593582 NREPQ16612 68 aa7.68□□□□□ -1.18
TRIM28-203ENST00000593582 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
TRIM28-203ENST00000593582 Q8N9P0 234 aaPredicted RBP7.67□□□□□ -1.18
TRIM28-203ENST00000593582 C8orf17Q9NRJ1 99 aa7.67□□□□□ -1.18
TRIM28-203ENST00000593582 IGKV3D-7A0A0C4DH55 119 aa7.66□□□□□ -1.18
TRIM28-203ENST00000593582 A0A1W2PPM0 123 aa7.66□□□□□ -1.18
TRIM28-203ENST00000593582 H3BT86 120 aa7.66□□□□□ -1.18
TRIM28-203ENST00000593582 TAX1BP3O14907 124 aa7.65□□□□□ -1.18
TRIM28-203ENST00000593582 SPINK7P58062 85 aa7.63□□□□□ -1.19
TRIM28-203ENST00000593582 PRR15Q8IV56 129 aa7.63□□□□□ -1.19
TRIM28-203ENST00000593582 MTURNQ8N3F0 131 aa7.63□□□□□ -1.19
TRIM28-203ENST00000593582 Q6ZVQ6 151 aa7.62□□□□□ -1.19
TRIM28-203ENST00000593582 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
TRIM28-203ENST00000593582 TMEM254Q8TBM7 123 aa7.56□□□□□ -1.2
TRIM28-203ENST00000593582 MRPL34Q9BQ48 92 aaKnown RBP7.56□□□□□ -1.2
TRIM28-203ENST00000593582 SPCS1Q9Y6A9 102 aa7.56□□□□□ -1.2
TRIM28-203ENST00000593582 MMP24-AS1A0A0U1RRL7 71 aa7.55□□□□□ -1.2
TRIM28-203ENST00000593582 K7EQZ3 153 aa7.54□□□□□ -1.2
TRIM28-203ENST00000593582 BPY2O14599 106 aa7.54□□□□□ -1.2
TRIM28-203ENST00000593582 hDV103S1A0JD37 113 aa7.53□□□□□ -1.2
TRIM28-203ENST00000593582 WFDC13Q8IUB5 93 aa7.52□□□□□ -1.21
TRIM28-203ENST00000593582 NDUFS5O43920 106 aa7.51□□□□□ -1.21
TRIM28-203ENST00000593582 MT2AP02795 61 aa7.5□□□□□ -1.21
TRIM28-203ENST00000593582 COL5A1-AS1Q5SY13 56 aa7.49□□□□□ -1.21
TRIM28-203ENST00000593582 SMCPP49901 116 aaPredicted RBP7.46□□□□□ -1.22
TRIM28-203ENST00000593582 KRTAP10-10P60014 251 aa7.45□□□□□ -1.22
TRIM28-203ENST00000593582 MT1FP04733 61 aa7.44□□□□□ -1.22
TRIM28-203ENST00000593582 Q8N9L7 120 aa7.44□□□□□ -1.22
TRIM28-203ENST00000593582 K7EP34 96 aa7.42□□□□□ -1.22
TRIM28-203ENST00000593582 CASC2Q6XLA1 102 aa7.42□□□□□ -1.22
TRIM28-203ENST00000593582 UBL5Q9BZL1 73 aa7.41□□□□□ -1.22
TRIM28-203ENST00000593582 PRO0461Q9UI25 63 aa7.41□□□□□ -1.22
TRIM28-203ENST00000593582 IGKV2D-30A0A075B6S6 120 aa7.4□□□□□ -1.22
TRIM28-203ENST00000593582 IGKV2-30P06310 120 aa7.4□□□□□ -1.22
TRIM28-203ENST00000593582 USH2AO75445 5202 aa7.39□□□□□ -1.23
TRIM28-203ENST00000593582 HCG22E2RYF7 251 aa7.38□□□□□ -1.23
TRIM28-203ENST00000593582 Q5W150 140 aa7.38□□□□□ -1.23
TRIM28-203ENST00000593582 LINC00846Q9NV44 126 aa7.38□□□□□ -1.23
TRIM28-203ENST00000593582 C7orf65Q6ZTY9 151 aa7.37□□□□□ -1.23
TRIM28-203ENST00000593582 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
TRIM28-203ENST00000593582 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
TRIM28-203ENST00000593582 GTF2H5Q6ZYL4 71 aa7.35□□□□□ -1.23
TRIM28-203ENST00000593582 CXCL6P80162 114 aa7.34□□□□□ -1.23
TRIM28-203ENST00000593582 LCE2BO14633 110 aa7.33□□□□□ -1.24
TRIM28-203ENST00000593582 SSPOA2VEC9 5147 aa7.32□□□□□ -1.24
TRIM28-203ENST00000593582 F8W1H4 67 aa7.3□□□□□ -1.24
TRIM28-203ENST00000593582 PCP4L1A6NKN8 68 aa7.29□□□□□ -1.24
TRIM28-203ENST00000593582 C4orf26Q17RF5 130 aa7.26□□□□□ -1.25
TRIM28-203ENST00000593582 ETDBQ3ZM63 59 aa7.25□□□□□ -1.25
TRIM28-203ENST00000593582 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
TRIM28-203ENST00000593582 TP53AIP1Q9HCN2 124 aa7.21□□□□□ -1.26
TRIM28-203ENST00000593582 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
TRIM28-203ENST00000593582 FCGBPQ9Y6R7 5405 aaPredicted RBP7.17□□□□□ -1.26
TRIM28-203ENST00000593582 ACYP1P07311 99 aa7.12□□□□□ -1.27
TRIM28-203ENST00000593582 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
TRIM28-203ENST00000593582 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
TRIM28-203ENST00000593582 KRTAP9-7A8MTY7 169 aa7.11□□□□□ -1.27
TRIM28-203ENST00000593582 C5orf47Q569G3 176 aa7.11□□□□□ -1.27
TRIM28-203ENST00000593582 S4R3F8 94 aa7.1□□□□□ -1.27
TRIM28-203ENST00000593582 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
TRIM28-203ENST00000593582 FAM240AA0A1B0GVK7 77 aa7.07□□□□□ -1.28
TRIM28-203ENST00000593582 ATP5EP2Q5VTU8 51 aa7.06□□□□□ -1.28
TRIM28-203ENST00000593582 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
TRIM28-203ENST00000593582 CYP4F30PQ9H0H9 118 aa7.05□□□□□ -1.28
TRIM28-203ENST00000593582 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
TRIM28-203ENST00000593582 FAM236AA0A1B0GUQ0 79 aa7.04□□□□□ -1.28
TRIM28-203ENST00000593582 FAM236BA0A1B0GV22 79 aa7.04□□□□□ -1.28
TRIM28-203ENST00000593582 LCA10Q71F78 164 aa7.04□□□□□ -1.28
TRIM28-203ENST00000593582 HIST1H4AP62805 103 aaKnown RBP7.02□□□□□ -1.29
TRIM28-203ENST00000593582 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
TRIM28-203ENST00000593582 UQCRQO14949 82 aa6.97□□□□□ -1.29
TRIM28-203ENST00000593582 ATOX1O00244 68 aa6.95□□□□□ -1.3
TRIM28-203ENST00000593582 MACF1Q9UPN3 7388 aaKnown RBP6.94□□□□□ -1.3
TRIM28-203ENST00000593582 H0Y9P7 68 aa6.93□□□□□ -1.3
TRIM28-203ENST00000593582 LINC00643Q86TS7 51 aa6.93□□□□□ -1.3
TRIM28-203ENST00000593582 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
TRIM28-203ENST00000593582 A0A087WVE0 104 aa6.9□□□□□ -1.3
TRIM28-203ENST00000593582 KLKP1Q107X0 134 aa6.88□□□□□ -1.31
TRIM28-203ENST00000593582 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms