RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 CCKP06307 115 aa10.92□□□□□ -0.66
CXXC1-216ENST00000591474 VAMP8Q9BV40 100 aa10.92□□□□□ -0.66
CXXC1-216ENST00000591474 A0A1B0GVX0 72 aa10.9□□□□□ -0.66
CXXC1-216ENST00000591474 TMEM256-PLSCR3K7ERE1 68 aa10.9□□□□□ -0.66
CXXC1-216ENST00000591474 ZCCHC13Q8WW36 166 aaKnown RBP10.89□□□□□ -0.67
CXXC1-216ENST00000591474 FXYD2P54710 66 aa10.88□□□□□ -0.67
CXXC1-216ENST00000591474 SPINK7P58062 85 aa10.87□□□□□ -0.67
CXXC1-216ENST00000591474 A8MWP4 228 aa10.85□□□□□ -0.67
CXXC1-216ENST00000591474 PYY3Q5JQD4 70 aa10.85□□□□□ -0.67
CXXC1-216ENST00000591474 UBE2V1Q13404 147 aa10.82□□□□□ -0.68
CXXC1-216ENST00000591474 PSMB2P49721 201 aa10.79□□□□□ -0.68
CXXC1-216ENST00000591474 VPS25Q9BRG1 176 aa10.78□□□□□ -0.68
CXXC1-216ENST00000591474 J3KT08 172 aa10.76□□□□□ -0.69
CXXC1-216ENST00000591474 COX6CP09669 75 aa10.76□□□□□ -0.69
CXXC1-216ENST00000591474 Q8N9P0 234 aaPredicted RBP10.76□□□□□ -0.69
CXXC1-216ENST00000591474 TMA7Q9Y2S6 64 aaKnown RBP10.75□□□□□ -0.69
CXXC1-216ENST00000591474 WFDC13Q8IUB5 93 aa10.74□□□□□ -0.69
CXXC1-216ENST00000591474 RBM3P98179 157 aaKnown RBP10.73□□□□□ -0.69
CXXC1-216ENST00000591474 K7ERJ3 54 aa10.72□□□□□ -0.69
CXXC1-216ENST00000591474 C21orf62-AS1Q17RA5 79 aa10.71□□□□□ -0.69
CXXC1-216ENST00000591474 KRTAP6-3Q3LI67 103 aa10.71□□□□□ -0.69
CXXC1-216ENST00000591474 DSCR8Q96T75 97 aa10.71□□□□□ -0.69
CXXC1-216ENST00000591474 HSD52Q0P140 79 aa10.69□□□□□ -0.7
CXXC1-216ENST00000591474 NDUFB1O75438 58 aa10.67□□□□□ -0.7
CXXC1-216ENST00000591474 Q6ZQT0 140 aa10.65□□□□□ -0.7
CXXC1-216ENST00000591474 UQCR10Q9UDW1 63 aa10.64□□□□□ -0.71
CXXC1-216ENST00000591474 C8orf17Q9NRJ1 99 aa10.63□□□□□ -0.71
CXXC1-216ENST00000591474 C9JAW5 83 aa10.62□□□□□ -0.71
CXXC1-216ENST00000591474 LYRM7Q5U5X0 104 aa10.62□□□□□ -0.71
CXXC1-216ENST00000591474 SCGB1C2P0DMR2 95 aa10.56□□□□□ -0.72
CXXC1-216ENST00000591474 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
CXXC1-216ENST00000591474 Q6ZVQ6 151 aa10.55□□□□□ -0.72
CXXC1-216ENST00000591474 BAALC-AS2P0C853 105 aa10.54□□□□□ -0.72
CXXC1-216ENST00000591474 H1FX-AS1Q4G0G2 97 aa10.54□□□□□ -0.72
CXXC1-216ENST00000591474 A0A1B0GW54 56 aa10.51□□□□□ -0.73
CXXC1-216ENST00000591474 PRR15Q8IV56 129 aa10.46□□□□□ -0.73
CXXC1-216ENST00000591474 LOC110117498A0A087WWA1 95 aa10.45□□□□□ -0.74
CXXC1-216ENST00000591474 JMJD7-PLA2G4BH0Y9G9 81 aa10.44□□□□□ -0.74
CXXC1-216ENST00000591474 SMIM6P0DI80 62 aa10.44□□□□□ -0.74
CXXC1-216ENST00000591474 MRPL34Q9BQ48 92 aaKnown RBP10.44□□□□□ -0.74
CXXC1-216ENST00000591474 TMEM254Q8TBM7 123 aa10.43□□□□□ -0.74
CXXC1-216ENST00000591474 MMP24-AS1A0A0U1RRL7 71 aa10.42□□□□□ -0.74
CXXC1-216ENST00000591474 NEBP20929 6669 aa10.41□□□□□ -0.74
CXXC1-216ENST00000591474 PDE6GP18545 87 aa10.4□□□□□ -0.74
CXXC1-216ENST00000591474 MUC12Q9UKN1 5478 aa10.38□□□□□ -0.75
CXXC1-216ENST00000591474 M0R143 59 aa10.36□□□□□ -0.75
CXXC1-216ENST00000591474 ATXN8Q156A1 80 aa10.35□□□□□ -0.75
CXXC1-216ENST00000591474 NREPQ16612 68 aa10.34□□□□□ -0.75
CXXC1-216ENST00000591474 hDV103S1A0JD37 113 aa10.33□□□□□ -0.76
CXXC1-216ENST00000591474 C14orf132Q9NPU4 83 aa10.33□□□□□ -0.76
CXXC1-216ENST00000591474 NDUFS5O43920 106 aa10.32□□□□□ -0.76
CXXC1-216ENST00000591474 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
CXXC1-216ENST00000591474 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
CXXC1-216ENST00000591474 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
CXXC1-216ENST00000591474 LOC105371267A0A1B0GV96 52 aa10.29□□□□□ -0.76
CXXC1-216ENST00000591474 A6NN06 94 aa10.27□□□□□ -0.77
CXXC1-216ENST00000591474 K7EQZ3 153 aa10.27□□□□□ -0.77
CXXC1-216ENST00000591474 Q5W150 140 aa10.25□□□□□ -0.77
CXXC1-216ENST00000591474 NAA38Q9BRA0 125 aaKnown RBP10.25□□□□□ -0.77
CXXC1-216ENST00000591474 TSTD3H0UI37 97 aa10.24□□□□□ -0.77
CXXC1-216ENST00000591474 MT1BP07438 61 aa10.22□□□□□ -0.77
CXXC1-216ENST00000591474 FAM236AA0A1B0GUQ0 79 aa10.18□□□□□ -0.78
CXXC1-216ENST00000591474 FAM236BA0A1B0GV22 79 aa10.18□□□□□ -0.78
CXXC1-216ENST00000591474 C4orf26Q17RF5 130 aa10.18□□□□□ -0.78
CXXC1-216ENST00000591474 Q5VV11 94 aa10.18□□□□□ -0.78
CXXC1-216ENST00000591474 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
CXXC1-216ENST00000591474 KRTAP19-8Q3LI54 63 aa10.14□□□□□ -0.79
CXXC1-216ENST00000591474 SPRR2GQ9BYE4 73 aa10.13□□□□□ -0.79
CXXC1-216ENST00000591474 BATFQ16520 125 aa10.12□□□□□ -0.79
CXXC1-216ENST00000591474 KRTAP20-1Q3LI63 56 aa10.12□□□□□ -0.79
CXXC1-216ENST00000591474 BPY2O14599 106 aa10.11□□□□□ -0.79
CXXC1-216ENST00000591474 HCG22E2RYF7 251 aa10.09□□□□□ -0.79
CXXC1-216ENST00000591474 KRTAP10-5P60370 271 aa10.09□□□□□ -0.79
CXXC1-216ENST00000591474 C9orf118A6NHY6 69 aa10.08□□□□□ -0.8
CXXC1-216ENST00000591474 TAX1BP3O14907 124 aa10.08□□□□□ -0.8
CXXC1-216ENST00000591474 CASC2Q6XLA1 102 aa10.07□□□□□ -0.8
CXXC1-216ENST00000591474 KRTAP5-9P26371 169 aa10.05□□□□□ -0.8
CXXC1-216ENST00000591474 KRTAP3-1Q9BYR8 98 aa10.05□□□□□ -0.8
CXXC1-216ENST00000591474 S4R3F8 94 aa10.05□□□□□ -0.8
CXXC1-216ENST00000591474 CXCL6P80162 114 aa10.04□□□□□ -0.8
CXXC1-216ENST00000591474 A0A1W2PPM0 123 aa10.03□□□□□ -0.8
CXXC1-216ENST00000591474 CSAG1Q6PB30 78 aa10.03□□□□□ -0.8
CXXC1-216ENST00000591474 Q8N9L7 120 aa10.03□□□□□ -0.8
CXXC1-216ENST00000591474 MDN1Q9NU22 5596 aa10.03□□□□□ -0.8
CXXC1-216ENST00000591474 H3BT86 120 aa9.99□□□□□ -0.81
CXXC1-216ENST00000591474 KMT2DO14686 5537 aa9.99□□□□□ -0.81
CXXC1-216ENST00000591474 LCA10Q71F78 164 aa9.98□□□□□ -0.81
CXXC1-216ENST00000591474 KLKP1Q107X0 134 aa9.95□□□□□ -0.82
CXXC1-216ENST00000591474 C1orf64Q8NEQ6 169 aa9.94□□□□□ -0.82
CXXC1-216ENST00000591474 SPCS1Q9Y6A9 102 aa9.86□□□□□ -0.83
CXXC1-216ENST00000591474 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
CXXC1-216ENST00000591474 COL5A1-AS1Q5SY13 56 aa9.84□□□□□ -0.83
CXXC1-216ENST00000591474 KRTAP3-3Q9BYR6 98 aa9.81□□□□□ -0.84
CXXC1-216ENST00000591474 IMUPQ9GZP8 106 aa9.8□□□□□ -0.84
CXXC1-216ENST00000591474 PRO0461Q9UI25 63 aa9.79□□□□□ -0.84
CXXC1-216ENST00000591474 CRIPTQ9P021 101 aa9.78□□□□□ -0.84
CXXC1-216ENST00000591474 K7EP34 96 aa9.75□□□□□ -0.85
CXXC1-216ENST00000591474 KRTAP2-3P0C7H8 128 aa9.74□□□□□ -0.85
CXXC1-216ENST00000591474 KRTAP2-4Q9BYR9 128 aa9.74□□□□□ -0.85
CXXC1-216ENST00000591474 UBL5Q9BZL1 73 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms